Project name: IL-21 [mutate: QC19A]

Status: done

Started: 2024-06-19 10:43:33
Settings
Chain sequence(s) A: QGQDRHMIRMRQLIDIVDQLKNYVNDLVPEFLPAPEDVETNCEWSAFSCFQKAQLKSANTGNNERIINVSIKKLKRKPPSTNAGRRQKHRLTCPSCDSYEKKPPKEFLERFKSLLQKMIHQHLSSRTHGSEDS
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Mutated residues QC19A
Energy difference between WT (input) and mutated protein (by FoldX) 1.25047 kcal/mol

CAUTION: Your mutation/s can destabilize the protein structure

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Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       FoldX:    Building mutant model                                                       (00:06:22)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:06:31)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:08:46)
[INFO]       Main:     Simulation completed successfully.                                          (00:08:47)
Show buried residues

Minimal score value
-4.0148
Maximal score value
0.1748
Average score
-1.491
Total score value
-198.297

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q A -2.3931
2 G A -2.4884
3 Q A -2.5183
4 D A -2.8539
5 R A -2.5909
6 H A 0.0000
7 M A -0.7703
8 I A 0.0012
9 R A -1.1383
10 M A 0.0000
11 R A -1.9922
12 Q A -1.7885
13 L A 0.0000
14 I A -2.1412
15 D A -2.6994
16 I A 0.0000
17 V A 0.0000
18 D A -2.0552
19 C A -0.9828 mutated: QC19A
20 L A 0.0000
21 K A -2.5286
22 N A -1.9617
23 Y A -1.3299
24 V A -1.5049
25 N A -1.8974
26 D A -1.7374
27 L A 0.0000
28 V A -1.2210
29 P A -1.2542
30 E A -1.4530
31 F A 0.0039
32 L A 0.0000
33 P A -1.7016
34 A A 0.0000
35 P A 0.0000
36 E A -3.1038
37 D A -3.0474
38 V A -2.3579
39 E A -2.7604
40 T A -1.6621
41 N A -1.5543
42 C A 0.0000
43 E A 0.0000
44 W A 0.1748
45 S A -0.0433
46 A A 0.0000
47 F A 0.0000
48 S A -0.9771
49 C A 0.0000
50 F A 0.0000
51 Q A -2.3121
52 K A -2.4002
53 A A 0.0000
54 Q A -2.1618
55 L A 0.0000
56 K A -2.6074
57 S A -1.9446
58 A A -1.5006
59 N A -2.2216
60 T A -1.6295
61 G A -2.0964
62 N A -2.2889
63 N A -2.0433
64 E A -2.6036
65 R A -2.3658
66 I A -0.7078
67 I A 0.0000
68 N A -1.5958
69 V A -0.6720
70 S A 0.0000
71 I A 0.0000
72 K A -2.4746
73 K A -2.6617
74 L A 0.0000
75 K A -3.3134
76 R A -3.8575
77 K A -3.0079
78 P A 0.0000
79 P A -1.4478
80 S A -1.2473
81 T A -1.6663
82 N A -2.1654
83 A A -1.8214
84 G A -2.4437
85 R A -3.7181
86 R A -4.0148
87 Q A -3.8731
88 K A -3.8278
89 H A -3.0957
90 R A -2.6770
91 L A -1.3108
92 T A -0.5710
93 C A -0.5138
94 P A -0.6067
95 S A -0.8347
96 C A -1.5045
97 D A -2.3286
98 S A -1.6714
99 Y A 0.0000
100 E A -2.5543
101 K A -1.6060
102 K A -1.1995
103 P A -0.8128
104 P A 0.0000
105 K A -2.8175
106 E A -2.2881
107 F A 0.0000
108 L A 0.0000
109 E A -3.0110
110 R A -2.4426
111 F A 0.0000
112 K A -2.0778
113 S A -1.7296
114 L A 0.0000
115 L A 0.0000
116 Q A -1.5921
117 K A -1.4044
118 M A 0.0000
119 I A 0.0000
120 H A -1.4546
121 Q A -1.4176
122 H A -1.0988
123 L A -0.8243
124 S A -1.3211
125 S A -1.7422
126 R A -2.5992
127 T A -1.9432
128 H A -2.6657
129 G A -2.7674
130 S A -2.6000
131 E A -3.4315
132 D A -3.0901
133 S A -1.6706
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Laboratory of Theory of Biopolymers 2018