| Chain sequence(s) |
A: QVQLVESGGALVQPGGSLRLSCAASGLEVQWSDLRWYRQAPGKEREWVCGISWTPFFISYEDSVKGRFTCSRDDARNTVYLQLNSLKPEDTAVYYCASQHSHAMAMHTKTLYWGQGTQVTVSS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:58)
[INFO] Main: Simulation completed successfully. (00:01:59)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | A | -1.5577 | |
| 2 | V | A | -1.3167 | |
| 3 | Q | A | -1.0752 | |
| 4 | L | A | 0.0000 | |
| 5 | V | A | 1.2081 | |
| 6 | E | A | 0.0000 | |
| 7 | S | A | -0.5276 | |
| 8 | G | A | -1.1637 | |
| 9 | G | A | -0.6994 | |
| 10 | A | A | 0.1527 | |
| 11 | L | A | 1.1481 | |
| 12 | V | A | 0.0306 | |
| 13 | Q | A | -1.3417 | |
| 14 | P | A | -1.5864 | |
| 15 | G | A | -1.3750 | |
| 16 | G | A | -0.9144 | |
| 17 | S | A | -1.2758 | |
| 18 | L | A | -1.0249 | |
| 19 | R | A | -2.2515 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.4119 | |
| 22 | C | A | 0.0000 | |
| 23 | A | A | -0.0788 | |
| 24 | A | A | 0.0000 | |
| 25 | S | A | -1.1177 | |
| 26 | G | A | -1.5185 | |
| 27 | L | A | 0.0000 | |
| 28 | E | A | -2.7683 | |
| 29 | V | A | 0.0000 | |
| 30 | Q | A | -2.0320 | |
| 31 | W | A | -0.9075 | |
| 32 | S | A | 0.0000 | |
| 33 | D | A | -0.2694 | |
| 34 | L | A | 0.0000 | |
| 35 | R | A | -0.3275 | |
| 36 | W | A | 0.0000 | |
| 37 | Y | A | -0.8087 | |
| 38 | R | A | -1.4845 | |
| 39 | Q | A | -2.1850 | |
| 40 | A | A | -2.0999 | |
| 41 | P | A | -1.3913 | |
| 42 | G | A | -1.9318 | |
| 43 | K | A | -3.4275 | |
| 44 | E | A | -3.6413 | |
| 45 | R | A | -2.8723 | |
| 46 | E | A | -2.6508 | |
| 47 | W | A | -1.0864 | |
| 48 | V | A | 0.0000 | |
| 49 | C | A | 0.0000 | |
| 50 | G | A | 0.0000 | |
| 51 | I | A | 0.0000 | |
| 52 | S | A | 1.2196 | |
| 53 | W | A | 0.8529 | |
| 54 | T | A | 1.3014 | |
| 55 | P | A | 1.4352 | |
| 56 | F | A | 3.1806 | |
| 57 | F | A | 3.5493 | |
| 58 | I | A | 2.7601 | |
| 59 | S | A | 0.7256 | |
| 60 | Y | A | -0.8665 | |
| 61 | E | A | -2.0769 | |
| 62 | D | A | -2.7794 | |
| 63 | S | A | -1.8376 | |
| 64 | V | A | 0.0000 | |
| 65 | K | A | -2.7930 | |
| 66 | G | A | -1.8065 | |
| 67 | R | A | -1.3559 | |
| 68 | F | A | 0.0000 | |
| 69 | T | A | -0.7927 | |
| 70 | C | A | 0.0000 | |
| 71 | S | A | -0.5148 | |
| 72 | R | A | -1.6952 | |
| 73 | D | A | -2.6403 | |
| 74 | D | A | -3.5099 | |
| 75 | A | A | -2.4375 | |
| 76 | R | A | -3.0296 | |
| 77 | N | A | -2.8033 | |
| 78 | T | A | 0.0000 | |
| 79 | V | A | 0.0000 | |
| 80 | Y | A | -0.8159 | |
| 81 | L | A | 0.0000 | |
| 82 | Q | A | -1.5459 | |
| 83 | L | A | 0.0000 | |
| 84 | N | A | -1.3720 | |
| 85 | S | A | -1.1840 | |
| 86 | L | A | 0.0000 | |
| 87 | K | A | -2.2783 | |
| 88 | P | A | -1.9655 | |
| 89 | E | A | -2.3364 | |
| 90 | D | A | 0.0000 | |
| 91 | T | A | -0.9097 | |
| 92 | A | A | 0.0000 | |
| 93 | V | A | -0.4588 | |
| 94 | Y | A | 0.0000 | |
| 95 | Y | A | -0.3284 | |
| 96 | C | A | 0.0000 | |
| 97 | A | A | 0.0000 | |
| 98 | S | A | 0.0000 | |
| 99 | Q | A | -0.7325 | |
| 100 | H | A | -1.3719 | |
| 101 | S | A | -0.6488 | |
| 102 | H | A | -0.1316 | |
| 103 | A | A | 0.4273 | |
| 104 | M | A | 1.0363 | |
| 105 | A | A | 0.2352 | |
| 106 | M | A | 0.5612 | |
| 107 | H | A | -0.7644 | |
| 108 | T | A | -1.2253 | |
| 109 | K | A | -1.8082 | |
| 110 | T | A | -0.7491 | |
| 111 | L | A | 0.1439 | |
| 112 | Y | A | 0.2408 | |
| 113 | W | A | 0.4889 | |
| 114 | G | A | 0.0785 | |
| 115 | Q | A | -0.7903 | |
| 116 | G | A | -0.4423 | |
| 117 | T | A | -0.6515 | |
| 118 | Q | A | -0.9592 | |
| 119 | V | A | 0.0000 | |
| 120 | T | A | -0.2097 | |
| 121 | V | A | 0.0000 | |
| 122 | S | A | -0.6914 | |
| 123 | S | A | -0.5088 |