Project name: Aldastotug

Status: done

Started: 2026-03-23 04:15:06
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Chain sequence(s) H: EVQLVQSGAEVKKPGESLRISCKGSGYSFTTYWISWVRQMPGKGLEWMGLIDPSDSYTNYSPSFKGHVTISTDKSISTAYLQWSSLKASDTAMYYCARGGYYGSEEDYWGQGTLVTVSS
L: EIVLTQSPGTLSLSPGERATLSCRASQSVSSSRLAWFQQKSGQAPRLLIFDASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPRTFGQGTKVEFK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:02)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:03)
Show buried residues

Minimal score value
-3.243
Maximal score value
1.9933
Average score
-0.5339
Total score value
-121.1896

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E H -2.0412
2 V H -1.0773
3 Q H -1.1754
4 L H 0.0000
5 V H 0.8078
6 Q H 0.0000
7 S H -0.3648
8 G H -0.3385
9 A H 0.3524
11 E H 0.2823
12 V H 1.1357
13 K H -1.0371
14 K H -2.4059
15 P H -2.2273
16 G H -2.0237
17 E H -2.3424
18 S H -1.8746
19 L H 0.0000
20 R H -2.2338
21 I H 0.0000
22 S H -0.5730
23 C H 0.0000
24 K H -0.3604
25 G H 0.0000
26 S H -0.6241
27 G H -1.1849
28 Y H -0.5177
29 S H -0.2624
30 F H 0.0000
35 T H -0.6909
36 T H 0.2341
37 Y H 0.8480
38 W H 0.8666
39 I H 0.0000
40 S H 0.0000
41 W H 0.0000
42 V H 0.0000
43 R H -0.4384
44 Q H -0.6927
45 M H -0.6452
46 P H -0.8185
47 G H -1.3886
48 K H -2.2897
49 G H -1.4650
50 L H 0.0000
51 E H -0.8359
52 W H 0.0000
53 M H 0.0000
54 G H 0.0000
55 L H 0.0000
56 I H 0.0000
57 D H -0.1311
58 P H 0.0000
59 S H -1.1343
62 D H -1.7111
63 S H -0.6651
64 Y H 0.5873
65 T H 0.2367
66 N H -0.2566
67 Y H -0.7153
68 S H 0.0000
69 P H -1.2234
70 S H -0.9130
71 F H 0.0000
72 K H -2.1354
74 G H -1.4953
75 H H -1.1849
76 V H 0.0000
77 T H -0.9455
78 I H 0.0000
79 S H -0.4518
80 T H -0.6535
81 D H -0.7908
82 K H -1.1200
83 S H -0.0140
84 I H 0.9940
85 S H -0.1217
86 T H 0.0000
87 A H 0.0000
88 Y H -0.7807
89 L H 0.0000
90 Q H -1.5586
91 W H 0.0000
92 S H -1.1278
93 S H -1.4465
94 L H 0.0000
95 K H -2.0418
96 A H -1.1746
97 S H -0.6040
98 D H 0.0000
99 T H -0.0068
100 A H 0.0000
101 M H 0.3439
102 Y H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 A H 0.0000
106 R H 0.0000
107 G H 0.0000
108 G H 1.0081
109 Y H 1.9933
110 Y H 1.9203
112 G H 0.0000
113 S H 0.0000
114 E H -0.1575
115 E H 0.0000
116 D H -0.4134
117 Y H -0.4026
118 W H 0.0000
119 G H 0.0000
120 Q H -1.1006
121 G H 0.0000
122 T H 0.0000
123 L H 0.8832
124 V H 0.0000
125 T H 0.2325
126 V H 0.0000
127 S H -0.9281
128 S H -1.0089
1 E L -1.6469
2 I L 0.0000
3 V L 0.5793
4 L L 0.0000
5 T L -0.7773
6 Q L 0.0000
7 S L -0.9514
8 P L -0.6012
9 G L -0.9843
10 T L -0.7031
11 L L -0.2323
12 S L -0.2109
13 L L -0.4816
14 S L -0.8823
15 P L -1.3338
16 G L -1.9633
17 E L -2.6426
18 R L -3.1127
19 A L 0.0000
20 T L -0.6715
21 L L 0.0000
22 S L -0.9237
23 C L 0.0000
24 R L -2.3377
25 A L 0.0000
26 S L -1.0518
27 Q L -1.7461
28 S L -1.3816
29 V L 0.0000
30 S L -0.7379
36 S L -0.6622
37 S L -0.9141
38 R L -0.7180
39 L L 0.0000
40 A L 0.0000
41 W L 0.0000
42 F L 0.0000
43 Q L 0.0000
44 Q L 0.0000
45 K L -1.3495
46 S L -1.0031
47 G L -1.4062
48 Q L -2.0257
49 A L -1.3078
50 P L 0.0000
51 R L -1.2476
52 L L 0.0000
53 L L 0.0000
54 I L 0.0000
55 F L -0.3004
56 D L -1.0489
57 A L 0.0000
65 S L -0.7473
66 S L -0.6301
67 R L -1.0910
68 A L -0.5477
69 T L -0.4402
70 G L -0.6960
71 I L -0.7519
72 P L -1.1697
74 D L -2.3096
75 R L -1.9554
76 F L 0.0000
77 S L -0.8748
78 G L -0.5121
79 S L -0.7566
80 G L -1.1590
83 S L -1.2087
84 G L -1.2720
85 T L -1.7567
86 D L -2.1734
87 F L 0.0000
88 T L -0.7744
89 L L 0.0000
90 T L -0.8461
91 I L 0.0000
92 S L -2.3967
93 R L -3.2430
94 L L 0.0000
95 E L -1.6200
96 P L -0.9276
97 E L -1.8619
98 D L 0.0000
99 F L -0.1676
100 A L 0.0000
101 V L -0.1420
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 Q L 0.0000
106 Q L 0.0000
107 Y L 0.0000
108 G L -0.3888
109 S L -0.6517
114 S L -0.6916
115 P L -0.6835
116 R L 0.0000
117 T L -0.1321
118 F L 0.0941
119 G L 0.0000
120 Q L -1.4123
121 G L 0.0000
122 T L 0.0000
123 K L -0.9658
124 V L 0.0000
125 E L 0.0343
126 F L 0.8725
127 K L -0.8371
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Laboratory of Theory of Biopolymers 2018