| Chain sequence(s) |
H: EVQLVQSGAEVKKPGESLRISCKGSGYSFTTYWISWVRQMPGKGLEWMGLIDPSDSYTNYSPSFKGHVTISTDKSISTAYLQWSSLKASDTAMYYCARGGYYGSEEDYWGQGTLVTVSS
L: EIVLTQSPGTLSLSPGERATLSCRASQSVSSSRLAWFQQKSGQAPRLLIFDASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPRTFGQGTKVEFK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:02)
[INFO] Main: Simulation completed successfully. (00:01:03)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -2.0412 | |
| 2 | V | H | -1.0773 | |
| 3 | Q | H | -1.1754 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 0.8078 | |
| 6 | Q | H | 0.0000 | |
| 7 | S | H | -0.3648 | |
| 8 | G | H | -0.3385 | |
| 9 | A | H | 0.3524 | |
| 11 | E | H | 0.2823 | |
| 12 | V | H | 1.1357 | |
| 13 | K | H | -1.0371 | |
| 14 | K | H | -2.4059 | |
| 15 | P | H | -2.2273 | |
| 16 | G | H | -2.0237 | |
| 17 | E | H | -2.3424 | |
| 18 | S | H | -1.8746 | |
| 19 | L | H | 0.0000 | |
| 20 | R | H | -2.2338 | |
| 21 | I | H | 0.0000 | |
| 22 | S | H | -0.5730 | |
| 23 | C | H | 0.0000 | |
| 24 | K | H | -0.3604 | |
| 25 | G | H | 0.0000 | |
| 26 | S | H | -0.6241 | |
| 27 | G | H | -1.1849 | |
| 28 | Y | H | -0.5177 | |
| 29 | S | H | -0.2624 | |
| 30 | F | H | 0.0000 | |
| 35 | T | H | -0.6909 | |
| 36 | T | H | 0.2341 | |
| 37 | Y | H | 0.8480 | |
| 38 | W | H | 0.8666 | |
| 39 | I | H | 0.0000 | |
| 40 | S | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | -0.4384 | |
| 44 | Q | H | -0.6927 | |
| 45 | M | H | -0.6452 | |
| 46 | P | H | -0.8185 | |
| 47 | G | H | -1.3886 | |
| 48 | K | H | -2.2897 | |
| 49 | G | H | -1.4650 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -0.8359 | |
| 52 | W | H | 0.0000 | |
| 53 | M | H | 0.0000 | |
| 54 | G | H | 0.0000 | |
| 55 | L | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | D | H | -0.1311 | |
| 58 | P | H | 0.0000 | |
| 59 | S | H | -1.1343 | |
| 62 | D | H | -1.7111 | |
| 63 | S | H | -0.6651 | |
| 64 | Y | H | 0.5873 | |
| 65 | T | H | 0.2367 | |
| 66 | N | H | -0.2566 | |
| 67 | Y | H | -0.7153 | |
| 68 | S | H | 0.0000 | |
| 69 | P | H | -1.2234 | |
| 70 | S | H | -0.9130 | |
| 71 | F | H | 0.0000 | |
| 72 | K | H | -2.1354 | |
| 74 | G | H | -1.4953 | |
| 75 | H | H | -1.1849 | |
| 76 | V | H | 0.0000 | |
| 77 | T | H | -0.9455 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.4518 | |
| 80 | T | H | -0.6535 | |
| 81 | D | H | -0.7908 | |
| 82 | K | H | -1.1200 | |
| 83 | S | H | -0.0140 | |
| 84 | I | H | 0.9940 | |
| 85 | S | H | -0.1217 | |
| 86 | T | H | 0.0000 | |
| 87 | A | H | 0.0000 | |
| 88 | Y | H | -0.7807 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -1.5586 | |
| 91 | W | H | 0.0000 | |
| 92 | S | H | -1.1278 | |
| 93 | S | H | -1.4465 | |
| 94 | L | H | 0.0000 | |
| 95 | K | H | -2.0418 | |
| 96 | A | H | -1.1746 | |
| 97 | S | H | -0.6040 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.0068 | |
| 100 | A | H | 0.0000 | |
| 101 | M | H | 0.3439 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | R | H | 0.0000 | |
| 107 | G | H | 0.0000 | |
| 108 | G | H | 1.0081 | |
| 109 | Y | H | 1.9933 | |
| 110 | Y | H | 1.9203 | |
| 112 | G | H | 0.0000 | |
| 113 | S | H | 0.0000 | |
| 114 | E | H | -0.1575 | |
| 115 | E | H | 0.0000 | |
| 116 | D | H | -0.4134 | |
| 117 | Y | H | -0.4026 | |
| 118 | W | H | 0.0000 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.1006 | |
| 121 | G | H | 0.0000 | |
| 122 | T | H | 0.0000 | |
| 123 | L | H | 0.8832 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | 0.2325 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.9281 | |
| 128 | S | H | -1.0089 | |
| 1 | E | L | -1.6469 | |
| 2 | I | L | 0.0000 | |
| 3 | V | L | 0.5793 | |
| 4 | L | L | 0.0000 | |
| 5 | T | L | -0.7773 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -0.9514 | |
| 8 | P | L | -0.6012 | |
| 9 | G | L | -0.9843 | |
| 10 | T | L | -0.7031 | |
| 11 | L | L | -0.2323 | |
| 12 | S | L | -0.2109 | |
| 13 | L | L | -0.4816 | |
| 14 | S | L | -0.8823 | |
| 15 | P | L | -1.3338 | |
| 16 | G | L | -1.9633 | |
| 17 | E | L | -2.6426 | |
| 18 | R | L | -3.1127 | |
| 19 | A | L | 0.0000 | |
| 20 | T | L | -0.6715 | |
| 21 | L | L | 0.0000 | |
| 22 | S | L | -0.9237 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -2.3377 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -1.0518 | |
| 27 | Q | L | -1.7461 | |
| 28 | S | L | -1.3816 | |
| 29 | V | L | 0.0000 | |
| 30 | S | L | -0.7379 | |
| 36 | S | L | -0.6622 | |
| 37 | S | L | -0.9141 | |
| 38 | R | L | -0.7180 | |
| 39 | L | L | 0.0000 | |
| 40 | A | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | F | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | 0.0000 | |
| 45 | K | L | -1.3495 | |
| 46 | S | L | -1.0031 | |
| 47 | G | L | -1.4062 | |
| 48 | Q | L | -2.0257 | |
| 49 | A | L | -1.3078 | |
| 50 | P | L | 0.0000 | |
| 51 | R | L | -1.2476 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | F | L | -0.3004 | |
| 56 | D | L | -1.0489 | |
| 57 | A | L | 0.0000 | |
| 65 | S | L | -0.7473 | |
| 66 | S | L | -0.6301 | |
| 67 | R | L | -1.0910 | |
| 68 | A | L | -0.5477 | |
| 69 | T | L | -0.4402 | |
| 70 | G | L | -0.6960 | |
| 71 | I | L | -0.7519 | |
| 72 | P | L | -1.1697 | |
| 74 | D | L | -2.3096 | |
| 75 | R | L | -1.9554 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.8748 | |
| 78 | G | L | -0.5121 | |
| 79 | S | L | -0.7566 | |
| 80 | G | L | -1.1590 | |
| 83 | S | L | -1.2087 | |
| 84 | G | L | -1.2720 | |
| 85 | T | L | -1.7567 | |
| 86 | D | L | -2.1734 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -0.7744 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | -0.8461 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -2.3967 | |
| 93 | R | L | -3.2430 | |
| 94 | L | L | 0.0000 | |
| 95 | E | L | -1.6200 | |
| 96 | P | L | -0.9276 | |
| 97 | E | L | -1.8619 | |
| 98 | D | L | 0.0000 | |
| 99 | F | L | -0.1676 | |
| 100 | A | L | 0.0000 | |
| 101 | V | L | -0.1420 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | Y | L | 0.0000 | |
| 108 | G | L | -0.3888 | |
| 109 | S | L | -0.6517 | |
| 114 | S | L | -0.6916 | |
| 115 | P | L | -0.6835 | |
| 116 | R | L | 0.0000 | |
| 117 | T | L | -0.1321 | |
| 118 | F | L | 0.0941 | |
| 119 | G | L | 0.0000 | |
| 120 | Q | L | -1.4123 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -0.9658 | |
| 124 | V | L | 0.0000 | |
| 125 | E | L | 0.0343 | |
| 126 | F | L | 0.8725 | |
| 127 | K | L | -0.8371 |