Project name: HN WT J

Status: done

Started: 2025-07-15 12:43:59
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Chain sequence(s) A: MGSDKIHHHHHHENLYFQGHMNQGGGYGGGYDNYGGGNYGSGNYNDFGNYNQQPSNYGPMKSGNFGGSRNMGGPYGGGNYGPGGSGGSGGYGGRSRY
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:43)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:44)
Show buried residues

Minimal score value
-3.0936
Maximal score value
2.0115
Average score
-0.9252
Total score value
-89.7418

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 0.5656
2 G A -0.7591
3 S A -1.2714
4 D A -2.2828
5 K A -2.1109
6 I A -0.2279
7 H A -1.6135
8 H A -2.0246
9 H A -2.3975
10 H A -2.8977
11 H A -3.0936
12 H A -2.9338
13 E A -2.7074
14 N A -1.1595
15 L A 1.2860
16 Y A 1.9393
17 F A 2.0115
18 Q A 0.0367
19 G A -0.6004
20 H A -1.3239
21 M A -0.7776
22 N A -1.8860
23 Q A -2.0747
24 G A -1.4920
25 G A -1.1712
26 G A -0.5084
27 Y A 0.6009
28 G A -0.3446
29 G A -0.5985
30 G A -0.8151
31 Y A -0.0075
32 D A -1.5882
33 N A -1.5345
34 Y A -0.1128
35 G A -0.9348
36 G A -1.0648
37 G A -1.0774
38 N A -1.2167
39 Y A 0.1470
40 G A -0.5325
41 S A -0.6820
42 G A -0.8232
43 N A -1.5465
44 Y A -0.2302
45 N A -1.5239
46 D A -1.5674
47 F A 0.7324
48 G A -0.3908
49 N A -1.2556
50 Y A -0.2908
51 N A -2.0176
52 Q A -2.3164
53 Q A -2.3551
54 P A -1.6024
55 S A -1.1250
56 N A -1.1565
57 Y A 0.5095
58 G A -0.3072
59 P A -0.2982
60 M A 0.0992
61 K A -1.7386
62 S A -1.0083
63 G A -1.0358
64 N A -1.1246
65 F A 0.7494
66 G A -0.6737
67 G A -1.1362
68 S A -1.5904
69 R A -2.5277
70 N A -2.0039
71 M A -0.5742
72 G A -0.7515
73 G A -0.4058
74 P A -0.0081
75 Y A 0.5698
76 G A -0.5574
77 G A -0.7677
78 G A -0.9331
79 N A -1.3291
80 Y A 0.0375
81 G A -0.6540
82 P A -0.6716
83 G A -0.9915
84 G A -1.1301
85 S A -0.9469
86 G A -1.0787
87 G A -1.0893
88 S A -0.7620
89 G A -0.6841
90 G A -0.3278
91 Y A 0.6045
92 G A -0.6818
93 G A -1.6416
94 R A -2.6190
95 S A -1.8728
96 R A -1.8371
97 Y A 0.1534
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Laboratory of Theory of Biopolymers 2018