| Chain sequence(s) |
A: MAKGAVLKGKGGGPPRRVPKETAKKTRQGPGRLPNGLVLMRMMGVLWHMVAGTARNPILKRFWATVPVRQAIAALRKIRKTVGLLLDSLNKRRGKRRSTTGLLTPILLACLATLVFS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:21)
[INFO] Main: Simulation completed successfully. (00:03:22)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.6319 | |
| 2 | A | A | -0.3664 | |
| 3 | K | A | -1.4150 | |
| 4 | G | A | -0.4711 | |
| 5 | A | A | 0.4431 | |
| 6 | V | A | 1.6834 | |
| 7 | L | A | 1.1709 | |
| 8 | K | A | -1.1899 | |
| 9 | G | A | -1.6373 | |
| 10 | K | A | -2.5516 | |
| 11 | G | A | -2.0527 | |
| 12 | G | A | -1.4921 | |
| 13 | G | A | -1.4287 | |
| 14 | P | A | -1.4886 | |
| 15 | P | A | -1.6810 | |
| 16 | R | A | -2.5128 | |
| 17 | R | A | -2.3196 | |
| 18 | V | A | -0.5702 | |
| 19 | P | A | -1.5071 | |
| 20 | K | A | -2.7277 | |
| 21 | E | A | -3.1881 | |
| 22 | T | A | -2.4172 | |
| 23 | A | A | -2.6244 | |
| 24 | K | A | -3.9080 | |
| 25 | K | A | -3.4937 | |
| 26 | T | A | -2.6682 | |
| 27 | R | A | -3.5262 | |
| 28 | Q | A | -3.3209 | |
| 29 | G | A | -2.2523 | |
| 30 | P | A | -1.6779 | |
| 31 | G | A | -1.7646 | |
| 32 | R | A | -2.6252 | |
| 33 | L | A | -1.4144 | |
| 34 | P | A | -1.2642 | |
| 35 | N | A | -1.4523 | |
| 36 | G | A | -0.6411 | |
| 37 | L | A | 0.0069 | |
| 38 | V | A | 0.0000 | |
| 39 | L | A | 0.2981 | |
| 40 | M | A | 0.5645 | |
| 41 | R | A | -0.2977 | |
| 42 | M | A | 0.0000 | |
| 43 | M | A | 1.0134 | |
| 44 | G | A | 0.8813 | |
| 45 | V | A | 0.0000 | |
| 46 | L | A | 1.9382 | |
| 47 | W | A | 2.0266 | |
| 48 | H | A | 1.0875 | |
| 49 | M | A | 1.7372 | |
| 50 | V | A | 2.3831 | |
| 51 | A | A | 1.1490 | |
| 52 | G | A | 0.1119 | |
| 53 | T | A | -0.3792 | |
| 54 | A | A | -0.9920 | |
| 55 | R | A | -2.0069 | |
| 56 | N | A | -1.3315 | |
| 57 | P | A | -1.2088 | |
| 58 | I | A | -0.6960 | |
| 59 | L | A | -0.6779 | |
| 60 | K | A | -2.0291 | |
| 61 | R | A | -2.0742 | |
| 62 | F | A | 0.0000 | |
| 63 | W | A | 0.4700 | |
| 64 | A | A | -0.2479 | |
| 65 | T | A | -0.2308 | |
| 66 | V | A | 0.0000 | |
| 67 | P | A | -0.1125 | |
| 68 | V | A | 0.7365 | |
| 69 | R | A | -1.0087 | |
| 70 | Q | A | -1.0291 | |
| 71 | A | A | 0.0000 | |
| 72 | I | A | 0.1904 | |
| 73 | A | A | -0.7925 | |
| 74 | A | A | 0.0000 | |
| 75 | L | A | -0.6540 | |
| 76 | R | A | -2.7313 | |
| 77 | K | A | -2.8295 | |
| 78 | I | A | -1.2037 | |
| 79 | R | A | -2.4580 | |
| 80 | K | A | -2.4487 | |
| 81 | T | A | -0.7760 | |
| 82 | V | A | -0.0910 | |
| 83 | G | A | -0.2707 | |
| 84 | L | A | 1.0292 | |
| 85 | L | A | 1.1519 | |
| 86 | L | A | -0.0365 | |
| 87 | D | A | -1.8453 | |
| 88 | S | A | -1.3668 | |
| 89 | L | A | -1.6698 | |
| 90 | N | A | -3.5250 | |
| 91 | K | A | -4.2490 | |
| 92 | R | A | -4.3371 | |
| 93 | R | A | -4.9976 | |
| 94 | G | A | -4.0900 | |
| 95 | K | A | -4.3640 | |
| 96 | R | A | -4.1449 | |
| 97 | R | A | -3.6154 | |
| 98 | S | A | -1.9794 | |
| 99 | T | A | -0.3739 | |
| 100 | T | A | 0.1087 | |
| 101 | G | A | 0.5433 | |
| 102 | L | A | 2.5420 | |
| 103 | L | A | 3.1426 | |
| 104 | T | A | 2.2472 | |
| 105 | P | A | 2.4400 | |
| 106 | I | A | 3.7291 | |
| 107 | L | A | 3.2403 | |
| 108 | L | A | 3.0666 | |
| 109 | A | A | 2.5694 | |
| 110 | C | A | 2.5875 | |
| 111 | L | A | 2.9807 | |
| 112 | A | A | 2.7008 | |
| 113 | T | A | 2.4705 | |
| 114 | L | A | 3.4079 | |
| 115 | V | A | 3.6598 | |
| 116 | F | A | 3.2030 | |
| 117 | S | A | 1.6836 |