Project name: 1B6

Status: done

Started: 2025-08-08 04:51:58
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Chain sequence(s) H: QLQLVESGGGLVQAGGSLRLSCAASGLTVGYLAIGWFRQAPGKEREGVSCISRSDGSTYYADSVKGRFTISSDNAKNTVYLQMNSLKPEDTAVYYCATDCTIVSPEFIDYWGKGTLVTVSS
input PDB
Selected Chain(s) H
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with H chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:42)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:42)
Show buried residues

Minimal score value
-3.1736
Maximal score value
2.7806
Average score
-0.5147
Total score value
-62.273

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q H -1.3563
2 L H -0.6597
3 Q H -0.8725
4 L H 0.0000
5 V H 0.4425
6 E H 0.0000
7 S H -0.1622
8 G H -0.6509
9 G H 0.2482
11 G H 0.8170
12 L H 1.5229
13 V H 0.1170
14 Q H -1.1972
15 A H -1.3754
16 G H -1.2728
17 G H -0.8383
18 S H -0.9597
19 L H -0.4696
20 R H -1.3051
21 L H 0.0000
22 S H -0.2710
23 C H 0.0000
24 A H -0.2629
25 A H -0.3625
26 S H -0.5350
27 G H -0.8507
28 L H -0.1348
29 T H -0.1896
30 V H 0.0000
35 G H -0.2793
36 Y H 0.9103
37 L H 0.4781
38 A H 0.0301
39 I H 0.0000
40 G H 0.0000
41 W H 0.0000
42 F H 0.0000
43 R H 0.0000
44 Q H -1.3385
45 A H -1.3842
46 P H -1.1651
47 G H -1.7801
48 K H -2.9313
49 E H -3.1736
50 R H -2.1923
51 E H -1.4603
52 G H -0.0542
53 V H 0.0000
54 S H 0.0000
55 C H 0.0000
56 I H 0.0000
57 S H -0.3142
58 R H -0.6934
59 S H -0.9110
62 D H -2.0476
63 G H -1.3669
64 S H -0.7308
65 T H 0.0155
66 Y H 0.6091
67 Y H -0.4240
68 A H -1.1461
69 D H -2.4604
70 S H -1.7992
71 V H 0.0000
72 K H -2.5016
74 G H -1.7271
75 R H -1.5859
76 F H 0.0000
77 T H -0.6820
78 I H 0.0000
79 S H -0.5726
80 S H -1.3818
81 D H -2.3877
82 N H -2.4066
83 A H -1.8368
84 K H -2.6241
85 N H -1.9673
86 T H 0.0000
87 V H 0.0000
88 Y H -0.4730
89 L H 0.0000
90 Q H -0.8241
91 M H 0.0000
92 N H -1.1871
93 S H -1.1690
94 L H 0.0000
95 K H -2.1356
96 P H -1.7481
97 E H -2.2444
98 D H 0.0000
99 T H -0.3497
100 A H 0.0000
101 V H 0.7847
102 Y H 0.0000
103 Y H 0.1417
104 C H 0.0000
105 A H 0.0000
106 T H 0.0000
107 D H -0.4707
108 C H 0.0000
109 T H 1.3608
110 I H 2.7806
111 V H 2.2370
112A S H 0.9648
112 P H -0.2307
113 E H -1.0588
114 F H 0.9091
115 I H -0.4072
116 D H -1.4206
117 Y H -0.6501
118 W H -0.3863
119 G H -0.6575
120 K H -1.3997
121 G H 0.0000
122 T H 0.5092
123 L H 1.8133
124 V H 0.0000
125 T H 0.4503
126 V H 0.0000
127 S H -0.7423
128 S H -0.8081
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Laboratory of Theory of Biopolymers 2018