| Chain sequence(s) |
H: EVQLVESGGGLVQPGGSLRLSCAASGFSFSNYSMAWVRQAPGKGLEWVSVISSNGGNISYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARISALQVQLQSVTYLMDYWGQGTLVTVSS
input PDB |
| Selected Chain(s) | H |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with H chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:31)
[INFO] Main: Simulation completed successfully. (00:00:32)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -1.4745 | |
| 2 | V | H | -0.6012 | |
| 3 | Q | H | -0.8907 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 1.1179 | |
| 6 | E | H | 0.4739 | |
| 7 | S | H | -0.1388 | |
| 8 | G | H | -0.8047 | |
| 9 | G | H | 0.0390 | |
| 10 | G | H | 0.5564 | |
| 11 | L | H | 1.3151 | |
| 12 | V | H | 0.0000 | |
| 13 | Q | H | -1.3829 | |
| 14 | P | H | -1.6262 | |
| 15 | G | H | -1.4548 | |
| 16 | G | H | -1.0752 | |
| 17 | S | H | -1.2946 | |
| 18 | L | H | -0.9768 | |
| 19 | R | H | -2.0595 | |
| 20 | L | H | 0.0000 | |
| 21 | S | H | -0.4189 | |
| 22 | C | H | 0.0000 | |
| 23 | A | H | -0.0876 | |
| 24 | A | H | 0.0000 | |
| 25 | S | H | -0.5675 | |
| 26 | G | H | -0.5813 | |
| 27 | F | H | 0.6725 | |
| 28 | S | H | -0.0071 | |
| 29 | F | H | 0.0000 | |
| 30 | S | H | -1.2475 | |
| 31 | N | H | -1.3715 | |
| 32 | Y | H | -0.5331 | |
| 33 | S | H | 0.0000 | |
| 34 | M | H | 0.0000 | |
| 35 | A | H | 0.0000 | |
| 36 | W | H | 0.0000 | |
| 37 | V | H | 0.0000 | |
| 38 | R | H | 0.0000 | |
| 39 | Q | H | -0.6528 | |
| 40 | A | H | -1.0742 | |
| 41 | P | H | -0.8990 | |
| 42 | G | H | -1.4731 | |
| 43 | K | H | -2.2556 | |
| 44 | G | H | -1.2002 | |
| 45 | L | H | 0.0444 | |
| 46 | E | H | -0.5620 | |
| 47 | W | H | 0.0678 | |
| 48 | V | H | 0.0000 | |
| 49 | S | H | 0.0000 | |
| 50 | V | H | 0.0000 | |
| 51 | I | H | 0.0000 | |
| 52 | S | H | 0.0000 | |
| 52A | S | H | -1.4578 | |
| 53 | N | H | -1.9043 | |
| 54 | G | H | -1.1752 | |
| 55 | G | H | -1.0403 | |
| 56 | N | H | -0.5836 | |
| 57 | I | H | 0.4578 | |
| 58 | S | H | -0.2242 | |
| 59 | Y | H | -0.7829 | |
| 60 | A | H | -1.5620 | |
| 61 | D | H | -2.5087 | |
| 62 | S | H | -1.7832 | |
| 63 | V | H | 0.0000 | |
| 64 | K | H | -2.6544 | |
| 65 | G | H | -1.7712 | |
| 66 | R | H | -1.5360 | |
| 67 | F | H | 0.0000 | |
| 68 | T | H | -0.7052 | |
| 69 | I | H | 0.0000 | |
| 70 | S | H | -0.2160 | |
| 71 | R | H | -1.1277 | |
| 72 | D | H | -1.5796 | |
| 73 | N | H | -2.1635 | |
| 74 | S | H | -1.6775 | |
| 75 | K | H | -2.4142 | |
| 76 | N | H | -1.6664 | |
| 77 | T | H | -1.0212 | |
| 78 | L | H | 0.0000 | |
| 79 | Y | H | -0.4731 | |
| 80 | L | H | 0.0000 | |
| 81 | Q | H | -1.1277 | |
| 82 | M | H | 0.0000 | |
| 82A | N | H | -1.4143 | |
| 82B | S | H | -1.2330 | |
| 82C | L | H | 0.0000 | |
| 83 | R | H | -2.2254 | |
| 84 | A | H | -1.6963 | |
| 85 | E | H | -2.1971 | |
| 86 | D | H | 0.0000 | |
| 87 | T | H | -0.4005 | |
| 88 | A | H | 0.0000 | |
| 89 | V | H | 0.8348 | |
| 90 | Y | H | 0.0000 | |
| 91 | Y | H | 0.4322 | |
| 92 | C | H | 0.0000 | |
| 93 | A | H | 0.0000 | |
| 94 | R | H | 0.0000 | |
| 95 | I | H | 0.0000 | |
| 96 | S | H | -0.3874 | |
| 97 | A | H | -0.0439 | |
| 98 | L | H | 0.0442 | |
| 99 | Q | H | -0.7371 | |
| 100 | V | H | 0.4804 | |
| 100A | Q | H | 0.0000 | |
| 100B | L | H | 0.7685 | |
| 100C | Q | H | -0.2726 | |
| 100D | S | H | 0.0000 | |
| 100E | V | H | 1.6381 | |
| 100F | T | H | 1.2923 | |
| 100G | Y | H | 2.1687 | |
| 100H | L | H | 2.2660 | |
| 100I | M | H | 0.0000 | |
| 101 | D | H | -0.0145 | |
| 102 | Y | H | 0.2895 | |
| 103 | W | H | 0.2817 | |
| 104 | G | H | 0.0127 | |
| 105 | Q | H | -0.7412 | |
| 106 | G | H | 0.0708 | |
| 107 | T | H | 0.5533 | |
| 108 | L | H | 1.5269 | |
| 109 | V | H | 0.0000 | |
| 110 | T | H | 0.2798 | |
| 111 | V | H | 0.0000 | |
| 112 | S | H | -0.7404 | |
| 113 | S | H | -0.5798 |