Project name: query_structure

Status: done

Started: 2026-03-16 23:11:35
Settings
Chain sequence(s) A: CGETCVGGTCNTPGCTCSWPVCTRNGLPV
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:02)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:02)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:02)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:02)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:02)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:16)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:16)
Show buried residues

Minimal score value
-1.6312
Maximal score value
1.8461
Average score
-0.0
Total score value
-0.0003

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 C A -0.1281
2 G A -0.2976
3 E A -0.2598
4 T A 0.4945
5 C A 0.0000
6 V A 1.8461
7 G A 0.4523
8 G A 0.2779
9 T A -0.0417
10 C A -0.4425
11 N A -1.3551
12 T A -1.0974
13 P A -0.9343
14 G A -1.2203
15 C A -0.8862
16 T A -0.4089
17 C A 0.5327
18 S A 0.9678
19 W A 1.7432
20 P A 1.4729
21 V A 1.2954
22 C A 0.0000
23 T A -0.0881
24 R A -1.2946
25 N A -1.6312
26 G A -0.7147
27 L A 0.6390
28 P A 0.3378
29 V A 0.7406
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Laboratory of Theory of Biopolymers 2018