| Chain sequence(s) |
A: CGETCVGGTCNTPGCTCSWPVCTRNGLPV
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:16)
[INFO] Main: Simulation completed successfully. (00:00:16)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | C | A | -0.1281 | |
| 2 | G | A | -0.2976 | |
| 3 | E | A | -0.2598 | |
| 4 | T | A | 0.4945 | |
| 5 | C | A | 0.0000 | |
| 6 | V | A | 1.8461 | |
| 7 | G | A | 0.4523 | |
| 8 | G | A | 0.2779 | |
| 9 | T | A | -0.0417 | |
| 10 | C | A | -0.4425 | |
| 11 | N | A | -1.3551 | |
| 12 | T | A | -1.0974 | |
| 13 | P | A | -0.9343 | |
| 14 | G | A | -1.2203 | |
| 15 | C | A | -0.8862 | |
| 16 | T | A | -0.4089 | |
| 17 | C | A | 0.5327 | |
| 18 | S | A | 0.9678 | |
| 19 | W | A | 1.7432 | |
| 20 | P | A | 1.4729 | |
| 21 | V | A | 1.2954 | |
| 22 | C | A | 0.0000 | |
| 23 | T | A | -0.0881 | |
| 24 | R | A | -1.2946 | |
| 25 | N | A | -1.6312 | |
| 26 | G | A | -0.7147 | |
| 27 | L | A | 0.6390 | |
| 28 | P | A | 0.3378 | |
| 29 | V | A | 0.7406 |