| Chain sequence(s) |
B: SAAAKAAADRLGAGLLADSKEKAEEQAKELKERLEEE
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:55)
[INFO] Main: Simulation completed successfully. (00:01:56)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | B | -0.5884 | |
| 2 | A | B | -0.6679 | |
| 3 | A | B | -0.5272 | |
| 4 | A | B | -1.1027 | |
| 5 | K | B | -2.1822 | |
| 6 | A | B | -1.4318 | |
| 7 | A | B | -1.0853 | |
| 8 | A | B | -0.6437 | |
| 9 | D | B | -1.2630 | |
| 10 | R | B | -1.3223 | |
| 11 | L | B | 0.9325 | |
| 12 | G | B | 0.3406 | |
| 13 | A | B | -0.0424 | |
| 14 | G | B | -0.0274 | |
| 15 | L | B | 0.7667 | |
| 16 | L | B | 0.3333 | |
| 17 | A | B | -1.5504 | |
| 18 | D | B | -2.8574 | |
| 19 | S | B | -2.5115 | |
| 20 | K | B | -3.6919 | |
| 21 | E | B | -4.9867 | |
| 22 | K | B | -5.0310 | |
| 23 | A | B | -4.0334 | |
| 24 | E | B | -5.3372 | |
| 25 | E | B | -5.5245 | |
| 26 | Q | B | -4.4491 | |
| 27 | A | B | -3.7191 | |
| 28 | K | B | -4.7554 | |
| 29 | E | B | -4.3191 | |
| 30 | L | B | -2.4618 | |
| 31 | K | B | -3.9026 | |
| 32 | E | B | -4.6000 | |
| 33 | R | B | -4.0289 | |
| 34 | L | B | -2.2851 | |
| 35 | E | B | -4.0954 | |
| 36 | E | B | -4.2709 | |
| 37 | E | B | -3.3534 |