| Chain sequence(s) |
A: DEIDRMVAYLKEKGYIKTEEEAEIVREAMEFERRCNLLATGIDVVEPPFLYRDVGKTETARRRAERALAAGDEEAARRWAWLFLGGAVERAAAALALGRLTEEEKAKLKEALKLTEETPVEEILALGREIYEGSVTRFREEAGEELRALGEELEATAVTPENRARLDRYYALVRAEAAAERAAAA
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:07:38)
[INFO] Main: Simulation completed successfully. (00:07:40)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | D | A | -2.9796 | |
| 2 | E | A | -2.3836 | |
| 3 | I | A | 0.0000 | |
| 4 | D | A | -3.7887 | |
| 5 | R | A | -3.3466 | |
| 6 | M | A | 0.0000 | |
| 7 | V | A | 0.0000 | |
| 8 | A | A | -2.1503 | |
| 9 | Y | A | -1.8280 | |
| 10 | L | A | 0.0000 | |
| 11 | K | A | -3.0013 | |
| 12 | E | A | -3.0414 | |
| 13 | K | A | -2.6184 | |
| 14 | G | A | -1.9368 | |
| 15 | Y | A | -1.1292 | |
| 16 | I | A | 0.0000 | |
| 17 | K | A | -3.0298 | |
| 18 | T | A | -2.7572 | |
| 19 | E | A | -3.6356 | |
| 20 | E | A | -3.5892 | |
| 21 | E | A | -2.8797 | |
| 22 | A | A | -2.9606 | |
| 23 | E | A | -3.1469 | |
| 24 | I | A | 0.0000 | |
| 25 | V | A | 0.0000 | |
| 26 | R | A | -2.4368 | |
| 27 | E | A | -2.2385 | |
| 28 | A | A | 0.0000 | |
| 29 | M | A | 0.0000 | |
| 30 | E | A | -2.3457 | |
| 31 | F | A | -1.6204 | |
| 32 | E | A | 0.0000 | |
| 33 | R | A | -1.9114 | |
| 34 | R | A | -2.2192 | |
| 35 | C | A | 0.0000 | |
| 36 | N | A | 0.0000 | |
| 37 | L | A | -0.5164 | |
| 38 | L | A | -0.6387 | |
| 39 | A | A | 0.0000 | |
| 40 | T | A | -0.2402 | |
| 41 | G | A | -0.4601 | |
| 42 | I | A | -0.6606 | |
| 43 | D | A | -0.9677 | |
| 44 | V | A | 0.0000 | |
| 45 | V | A | 0.0000 | |
| 46 | E | A | 0.0000 | |
| 47 | P | A | 0.0000 | |
| 48 | P | A | 0.0000 | |
| 49 | F | A | 0.0000 | |
| 50 | L | A | 0.0000 | |
| 51 | Y | A | -1.2036 | |
| 52 | R | A | -1.7979 | |
| 53 | D | A | -2.2604 | |
| 54 | V | A | -1.5452 | |
| 55 | G | A | -1.4751 | |
| 56 | K | A | -1.1459 | |
| 57 | T | A | -0.6444 | |
| 58 | E | A | -1.0314 | |
| 59 | T | A | 0.0000 | |
| 60 | A | A | 0.0000 | |
| 61 | R | A | -1.6745 | |
| 62 | R | A | -2.4966 | |
| 63 | R | A | -1.9694 | |
| 64 | A | A | 0.0000 | |
| 65 | E | A | -2.7673 | |
| 66 | R | A | -2.1387 | |
| 67 | A | A | 0.0000 | |
| 68 | L | A | -1.9577 | |
| 69 | A | A | -0.9672 | |
| 70 | A | A | -1.0063 | |
| 71 | G | A | -1.7211 | |
| 72 | D | A | -2.7507 | |
| 73 | E | A | -2.9125 | |
| 74 | E | A | -3.1662 | |
| 75 | A | A | -2.4056 | |
| 76 | A | A | 0.0000 | |
| 77 | R | A | -2.5888 | |
| 78 | R | A | -1.7950 | |
| 79 | W | A | -1.4336 | |
| 80 | A | A | 0.0000 | |
| 81 | W | A | 0.0000 | |
| 82 | L | A | 0.0000 | |
| 83 | F | A | 0.0000 | |
| 84 | L | A | 0.0000 | |
| 85 | G | A | 0.0000 | |
| 86 | G | A | 0.0000 | |
| 87 | A | A | 0.0000 | |
| 88 | V | A | 0.0000 | |
| 89 | E | A | -0.3783 | |
| 90 | R | A | -0.5676 | |
| 91 | A | A | 0.0000 | |
| 92 | A | A | 0.0000 | |
| 93 | A | A | 0.0000 | |
| 94 | A | A | 0.0000 | |
| 95 | L | A | 0.0000 | |
| 96 | A | A | 0.0000 | |
| 97 | L | A | -0.4180 | |
| 98 | G | A | -1.0496 | |
| 99 | R | A | -1.7975 | |
| 100 | L | A | -1.5353 | |
| 101 | T | A | -2.0905 | |
| 102 | E | A | -3.1274 | |
| 103 | E | A | -3.1835 | |
| 104 | E | A | -2.8005 | |
| 105 | K | A | -2.5752 | |
| 106 | A | A | -2.3738 | |
| 107 | K | A | -2.6039 | |
| 108 | L | A | 0.0000 | |
| 109 | K | A | -2.5918 | |
| 110 | E | A | -2.7744 | |
| 111 | A | A | 0.0000 | |
| 112 | L | A | -1.7172 | |
| 113 | K | A | -2.1848 | |
| 114 | L | A | -1.7357 | |
| 115 | T | A | -1.5403 | |
| 116 | E | A | -2.1237 | |
| 117 | E | A | -2.4307 | |
| 118 | T | A | -2.2539 | |
| 119 | P | A | -2.1989 | |
| 120 | V | A | 0.0000 | |
| 121 | E | A | -2.9196 | |
| 122 | E | A | -2.7262 | |
| 123 | I | A | 0.0000 | |
| 124 | L | A | 0.0000 | |
| 125 | A | A | -1.6667 | |
| 126 | L | A | -1.6707 | |
| 127 | G | A | 0.0000 | |
| 128 | R | A | -2.1824 | |
| 129 | E | A | -2.6932 | |
| 130 | I | A | 0.0000 | |
| 131 | Y | A | 0.0000 | |
| 132 | E | A | -2.4565 | |
| 133 | G | A | -1.5663 | |
| 134 | S | A | 0.0000 | |
| 135 | V | A | -1.5345 | |
| 136 | T | A | -2.0135 | |
| 137 | R | A | -2.6863 | |
| 138 | F | A | 0.0000 | |
| 139 | R | A | -3.4126 | |
| 140 | E | A | -3.7998 | |
| 141 | E | A | -3.5279 | |
| 142 | A | A | -2.9547 | |
| 143 | G | A | -2.8907 | |
| 144 | E | A | -3.2355 | |
| 145 | E | A | -3.3611 | |
| 146 | L | A | 0.0000 | |
| 147 | R | A | -3.2162 | |
| 148 | A | A | -2.6920 | |
| 149 | L | A | 0.0000 | |
| 150 | G | A | 0.0000 | |
| 151 | E | A | -2.9385 | |
| 152 | E | A | -2.1477 | |
| 153 | L | A | 0.0000 | |
| 154 | E | A | -1.4014 | |
| 155 | A | A | -1.0722 | |
| 156 | T | A | -0.8441 | |
| 157 | A | A | 0.0000 | |
| 158 | V | A | 0.0000 | |
| 159 | T | A | -1.5576 | |
| 160 | P | A | -1.6328 | |
| 161 | E | A | -2.4815 | |
| 162 | N | A | 0.0000 | |
| 163 | R | A | -2.6273 | |
| 164 | A | A | -2.6424 | |
| 165 | R | A | -2.9827 | |
| 166 | L | A | 0.0000 | |
| 167 | D | A | -3.1412 | |
| 168 | R | A | -3.0928 | |
| 169 | Y | A | 0.0000 | |
| 170 | Y | A | 0.0000 | |
| 171 | A | A | -1.4021 | |
| 172 | L | A | -0.7141 | |
| 173 | V | A | 0.0000 | |
| 174 | R | A | -1.6603 | |
| 175 | A | A | -0.5622 | |
| 176 | E | A | -1.0427 | |
| 177 | A | A | -1.3661 | |
| 178 | A | A | -1.0353 | |
| 179 | A | A | -0.8382 | |
| 180 | E | A | 0.0000 | |
| 181 | R | A | -1.9291 | |
| 182 | A | A | -0.8019 | |
| 183 | A | A | -0.4720 | |
| 184 | A | A | -0.7280 | |
| 185 | A | A | -0.3529 |