Project name: ATPase_ref1

Status: done

Started: 2026-02-11 17:27:08
Settings
Chain sequence(s) A: DEIDRMVAYLKEKGYIKTEEEAEIVREAMEFERRCNLLATGIDVVEPPFLYRDVGKTETARRRAERALAAGDEEAARRWAWLFLGGAVERAAAALALGRLTEEEKAKLKEALKLTEETPVEEILALGREIYEGSVTRFREEAGEELRALGEELEATAVTPENRARLDRYYALVRAEAAAERAAAA
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:07:38)
[INFO]       Main:     Simulation completed successfully.                                          (00:07:40)
Show buried residues

Minimal score value
-3.7998
Maximal score value
0.0
Average score
-1.3624
Total score value
-252.0397

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 D A -2.9796
2 E A -2.3836
3 I A 0.0000
4 D A -3.7887
5 R A -3.3466
6 M A 0.0000
7 V A 0.0000
8 A A -2.1503
9 Y A -1.8280
10 L A 0.0000
11 K A -3.0013
12 E A -3.0414
13 K A -2.6184
14 G A -1.9368
15 Y A -1.1292
16 I A 0.0000
17 K A -3.0298
18 T A -2.7572
19 E A -3.6356
20 E A -3.5892
21 E A -2.8797
22 A A -2.9606
23 E A -3.1469
24 I A 0.0000
25 V A 0.0000
26 R A -2.4368
27 E A -2.2385
28 A A 0.0000
29 M A 0.0000
30 E A -2.3457
31 F A -1.6204
32 E A 0.0000
33 R A -1.9114
34 R A -2.2192
35 C A 0.0000
36 N A 0.0000
37 L A -0.5164
38 L A -0.6387
39 A A 0.0000
40 T A -0.2402
41 G A -0.4601
42 I A -0.6606
43 D A -0.9677
44 V A 0.0000
45 V A 0.0000
46 E A 0.0000
47 P A 0.0000
48 P A 0.0000
49 F A 0.0000
50 L A 0.0000
51 Y A -1.2036
52 R A -1.7979
53 D A -2.2604
54 V A -1.5452
55 G A -1.4751
56 K A -1.1459
57 T A -0.6444
58 E A -1.0314
59 T A 0.0000
60 A A 0.0000
61 R A -1.6745
62 R A -2.4966
63 R A -1.9694
64 A A 0.0000
65 E A -2.7673
66 R A -2.1387
67 A A 0.0000
68 L A -1.9577
69 A A -0.9672
70 A A -1.0063
71 G A -1.7211
72 D A -2.7507
73 E A -2.9125
74 E A -3.1662
75 A A -2.4056
76 A A 0.0000
77 R A -2.5888
78 R A -1.7950
79 W A -1.4336
80 A A 0.0000
81 W A 0.0000
82 L A 0.0000
83 F A 0.0000
84 L A 0.0000
85 G A 0.0000
86 G A 0.0000
87 A A 0.0000
88 V A 0.0000
89 E A -0.3783
90 R A -0.5676
91 A A 0.0000
92 A A 0.0000
93 A A 0.0000
94 A A 0.0000
95 L A 0.0000
96 A A 0.0000
97 L A -0.4180
98 G A -1.0496
99 R A -1.7975
100 L A -1.5353
101 T A -2.0905
102 E A -3.1274
103 E A -3.1835
104 E A -2.8005
105 K A -2.5752
106 A A -2.3738
107 K A -2.6039
108 L A 0.0000
109 K A -2.5918
110 E A -2.7744
111 A A 0.0000
112 L A -1.7172
113 K A -2.1848
114 L A -1.7357
115 T A -1.5403
116 E A -2.1237
117 E A -2.4307
118 T A -2.2539
119 P A -2.1989
120 V A 0.0000
121 E A -2.9196
122 E A -2.7262
123 I A 0.0000
124 L A 0.0000
125 A A -1.6667
126 L A -1.6707
127 G A 0.0000
128 R A -2.1824
129 E A -2.6932
130 I A 0.0000
131 Y A 0.0000
132 E A -2.4565
133 G A -1.5663
134 S A 0.0000
135 V A -1.5345
136 T A -2.0135
137 R A -2.6863
138 F A 0.0000
139 R A -3.4126
140 E A -3.7998
141 E A -3.5279
142 A A -2.9547
143 G A -2.8907
144 E A -3.2355
145 E A -3.3611
146 L A 0.0000
147 R A -3.2162
148 A A -2.6920
149 L A 0.0000
150 G A 0.0000
151 E A -2.9385
152 E A -2.1477
153 L A 0.0000
154 E A -1.4014
155 A A -1.0722
156 T A -0.8441
157 A A 0.0000
158 V A 0.0000
159 T A -1.5576
160 P A -1.6328
161 E A -2.4815
162 N A 0.0000
163 R A -2.6273
164 A A -2.6424
165 R A -2.9827
166 L A 0.0000
167 D A -3.1412
168 R A -3.0928
169 Y A 0.0000
170 Y A 0.0000
171 A A -1.4021
172 L A -0.7141
173 V A 0.0000
174 R A -1.6603
175 A A -0.5622
176 E A -1.0427
177 A A -1.3661
178 A A -1.0353
179 A A -0.8382
180 E A 0.0000
181 R A -1.9291
182 A A -0.8019
183 A A -0.4720
184 A A -0.7280
185 A A -0.3529
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Laboratory of Theory of Biopolymers 2018