| Chain sequence(s) |
L: KYGCYFGNVAEKD
input PDB |
| Selected Chain(s) | L |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with L chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:13)
[INFO] Main: Simulation completed successfully. (00:00:13)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 242 | K | L | -1.4604 | |
| 243 | Y | L | 0.9214 | |
| 244 | G | L | -0.0949 | |
| 245 | C | L | 0.8865 | |
| 246 | Y | L | 1.8035 | |
| 247 | F | L | 2.0955 | |
| 248 | G | L | -0.3422 | |
| 249 | N | L | -1.1607 | |
| 250 | V | L | 0.8790 | |
| 251 | A | L | -0.0677 | |
| 252 | E | L | -2.1245 | |
| 253 | K | L | -2.3621 | |
| 254 | D | L | -2.0980 |