| Chain sequence(s) |
A: VSSVPTKLEVVAATPTSLLISWDAPAVTVDFYFITYGETGYPGPPQEFTVPGSKSTATISGLKPGVDYTITVYAWAYYERLSPISIYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:41)
[INFO] Main: Simulation completed successfully. (00:00:42)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.7662 | |
| 2 | S | A | 0.7537 | |
| 3 | S | A | 0.3258 | |
| 4 | V | A | 0.3059 | |
| 5 | P | A | 0.0000 | |
| 6 | T | A | -1.3349 | |
| 7 | K | A | -2.3868 | |
| 8 | L | A | 0.0000 | |
| 9 | E | A | -1.7628 | |
| 10 | V | A | -0.0136 | |
| 11 | V | A | 1.5547 | |
| 12 | A | A | 0.9381 | |
| 13 | A | A | 0.5787 | |
| 14 | T | A | -0.3475 | |
| 15 | P | A | -0.8449 | |
| 16 | T | A | -0.9481 | |
| 17 | S | A | -0.4625 | |
| 18 | L | A | 0.5442 | |
| 19 | L | A | 0.8304 | |
| 20 | I | A | 0.0000 | |
| 21 | S | A | -0.7789 | |
| 22 | W | A | 0.0000 | |
| 23 | D | A | -1.7930 | |
| 24 | A | A | -0.8649 | |
| 25 | P | A | 0.1759 | |
| 26 | A | A | 0.4712 | |
| 27 | V | A | 0.5646 | |
| 28 | T | A | -0.0061 | |
| 29 | V | A | 0.0000 | |
| 30 | D | A | -1.1579 | |
| 31 | F | A | -0.2973 | |
| 32 | Y | A | 0.0000 | |
| 33 | F | A | 0.0746 | |
| 34 | I | A | 0.0000 | |
| 35 | T | A | 0.0000 | |
| 36 | Y | A | 0.0000 | |
| 37 | G | A | -1.0107 | |
| 38 | E | A | -1.0818 | |
| 39 | T | A | -0.4046 | |
| 40 | G | A | -0.1350 | |
| 41 | Y | A | 0.5507 | |
| 42 | P | A | 0.0020 | |
| 43 | G | A | -0.2978 | |
| 44 | P | A | -0.8859 | |
| 45 | P | A | -1.4245 | |
| 46 | Q | A | -2.1571 | |
| 47 | E | A | -2.1419 | |
| 48 | F | A | -0.5354 | |
| 49 | T | A | 0.1275 | |
| 50 | V | A | 0.0000 | |
| 51 | P | A | -0.8055 | |
| 52 | G | A | -0.9946 | |
| 53 | S | A | -1.2548 | |
| 54 | K | A | -1.9517 | |
| 55 | S | A | -1.1103 | |
| 56 | T | A | -0.6365 | |
| 57 | A | A | 0.0000 | |
| 58 | T | A | 0.2898 | |
| 59 | I | A | 0.0000 | |
| 60 | S | A | -0.6273 | |
| 61 | G | A | -1.0218 | |
| 62 | L | A | 0.0000 | |
| 63 | K | A | -2.1060 | |
| 64 | P | A | -1.2938 | |
| 65 | G | A | -0.8916 | |
| 66 | V | A | -0.9211 | |
| 67 | D | A | -1.0930 | |
| 68 | Y | A | 0.0000 | |
| 69 | T | A | -0.1835 | |
| 70 | I | A | 0.0000 | |
| 71 | T | A | 0.0019 | |
| 72 | V | A | 0.0000 | |
| 73 | Y | A | 0.0655 | |
| 74 | A | A | 0.0000 | |
| 75 | W | A | -0.5123 | |
| 76 | A | A | 0.0000 | |
| 77 | Y | A | 0.8717 | |
| 78 | Y | A | 0.4458 | |
| 79 | E | A | -1.7763 | |
| 80 | R | A | -2.0798 | |
| 81 | L | A | 0.0000 | |
| 82 | S | A | -0.6973 | |
| 83 | P | A | -0.2816 | |
| 84 | I | A | 0.0120 | |
| 85 | S | A | 0.0103 | |
| 86 | I | A | 0.0137 | |
| 87 | Y | A | 0.3794 | |
| 88 | R | A | -1.1083 | |
| 89 | T | A | -0.6244 |