Project name: query_structure

Status: done

Started: 2026-03-16 20:10:09
Settings
Chain sequence(s) A: EVVREVCSEQAETGPCRAAIFRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSAI
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:34)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:35)
Show buried residues

Minimal score value
-2.9835
Maximal score value
2.5267
Average score
-0.6147
Total score value
-37.4994

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E A -1.7120
2 V A 0.0418
3 V A -0.5519
4 R A -2.2482
5 E A -2.8812
6 V A -2.0681
7 C A 0.0000
8 S A -1.6159
9 E A -2.9835
10 Q A -2.2988
11 A A -1.5550
12 E A -1.6790
13 T A -0.4184
14 G A -0.6608
15 P A -0.7058
16 C A -0.6208
17 R A -1.3377
18 A A 0.0283
19 A A 1.1223
20 I A 1.9521
21 F A 2.4835
22 R A 0.4843
23 W A -0.3883
24 Y A -0.9955
25 F A 0.0000
26 D A -1.3441
27 V A -0.2109
28 T A -0.8757
29 E A -2.1891
30 G A -1.1359
31 K A -2.2645
32 C A -1.4008
33 A A -0.8476
34 P A 0.0454
35 F A 1.5033
36 F A 2.5267
37 Y A 1.2386
38 G A 0.0000
39 G A 0.3179
40 C A 0.0333
41 G A -0.8008
42 G A -1.5955
43 N A -2.1337
44 R A -2.7734
45 N A 0.0000
46 N A -1.2218
47 F A 0.0000
48 D A -1.8243
49 T A -1.5888
50 E A -2.3617
51 E A -2.0049
52 Y A -0.3986
53 C A 0.0000
54 M A -0.5081
55 A A 0.0443
56 V A 0.3202
57 C A 0.0000
58 G A 0.2220
59 S A 0.3484
60 A A 0.2183
61 I A 1.7710
Download PDB file
View in 3Dmol
Play the video

Laboratory of Theory of Biopolymers 2018