Project name: khj

Status: done

Started: 2025-07-21 07:16:00
Settings
Chain sequence(s) A: ALILLMWRTGEIMDYEYFVQYNMMQALHFGKMHLNSCGRQGTGMIRKDGDQGAGEGRDAERLRQKHSDR
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:18)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:19)
Show buried residues

Minimal score value
-4.845
Maximal score value
3.0005
Average score
-0.9685
Total score value
-66.8269

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 A A -0.0835
2 L A 1.3824
3 I A 0.0000
4 L A 2.0496
5 L A 1.6950
6 M A 0.5362
7 W A 0.4855
8 R A -0.8285
9 T A 0.0000
10 G A -1.0943
11 E A -1.4450
12 I A -0.4301
13 M A 0.0000
14 D A 0.1238
15 Y A 1.3497
16 E A 1.1639
17 Y A 1.7050
18 F A 3.0005
19 V A 2.7159
20 Q A 0.9759
21 Y A 1.9817
22 N A 0.8188
23 M A 0.0412
24 M A 0.6039
25 Q A 0.0824
26 A A 0.0000
27 L A -0.5005
28 H A -0.2938
29 F A 0.3215
30 G A 0.0000
31 K A -1.6711
32 M A -0.3022
33 H A -0.9019
34 L A -1.1136
35 N A -1.7709
36 S A -1.6063
37 C A 0.0000
38 G A -1.9880
39 R A -3.0394
40 Q A -2.3318
41 G A -1.2336
42 T A -0.6891
43 G A -0.0758
44 M A 0.2596
45 I A 0.4322
46 R A -2.2514
47 K A -2.4881
48 D A 0.0000
49 G A -1.9669
50 D A -3.2025
51 Q A -2.4826
52 G A -1.7357
53 A A -2.0245
54 G A -2.3059
55 E A -2.9692
56 G A -2.7213
57 R A -4.2522
58 D A -4.4085
59 A A 0.0000
60 E A -4.8450
61 R A -4.8020
62 L A -3.3035
63 R A -3.5868
64 Q A -4.2966
65 K A -4.0547
66 H A 0.0000
67 S A -2.7436
68 D A -3.5880
69 R A -3.1232
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Laboratory of Theory of Biopolymers 2018