| Chain sequence(s) |
A: SREIILLDRATFERLAASELPDVIAAADFAILAAGRIGRTYGPLFVEAGVPVMIVGMDPEKVKAIADELGTDYYVALDRFGDAETLKKILESLKDKKRILVALGSAEDTFIEVALKLGHKITDLRVYPKLTNKTKELKKKYPV
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:04:53)
[INFO] Main: Simulation completed successfully. (00:04:54)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | A | -1.3499 | |
| 2 | R | A | -2.7174 | |
| 3 | E | A | -2.1291 | |
| 4 | I | A | 0.0000 | |
| 5 | I | A | -0.2660 | |
| 6 | L | A | 0.0000 | |
| 7 | L | A | 0.0000 | |
| 8 | D | A | 0.0000 | |
| 9 | R | A | -1.7383 | |
| 10 | A | A | -1.0697 | |
| 11 | T | A | 0.0000 | |
| 12 | F | A | 0.0000 | |
| 13 | E | A | -2.4881 | |
| 14 | R | A | -2.7568 | |
| 15 | L | A | -2.0338 | |
| 16 | A | A | -1.6593 | |
| 17 | A | A | -1.2278 | |
| 18 | S | A | -1.7255 | |
| 19 | E | A | -2.6355 | |
| 20 | L | A | 0.0000 | |
| 21 | P | A | -1.7151 | |
| 22 | D | A | -2.3187 | |
| 23 | V | A | -1.2279 | |
| 24 | I | A | 0.0000 | |
| 25 | A | A | -0.8580 | |
| 26 | A | A | -0.9595 | |
| 27 | A | A | 0.0000 | |
| 28 | D | A | -1.5113 | |
| 29 | F | A | 0.0000 | |
| 30 | A | A | 0.0000 | |
| 31 | I | A | 0.0000 | |
| 32 | L | A | 0.0000 | |
| 33 | A | A | -0.4427 | |
| 34 | A | A | -1.2964 | |
| 35 | G | A | -1.6386 | |
| 36 | R | A | -2.5725 | |
| 37 | I | A | -1.6433 | |
| 38 | G | A | 0.0000 | |
| 39 | R | A | -2.6923 | |
| 40 | T | A | -1.5659 | |
| 41 | Y | A | 0.0000 | |
| 42 | G | A | 0.0000 | |
| 43 | P | A | -0.7717 | |
| 44 | L | A | -0.1785 | |
| 45 | F | A | 0.0000 | |
| 46 | V | A | -0.0314 | |
| 47 | E | A | -1.3868 | |
| 48 | A | A | -0.9661 | |
| 49 | G | A | -0.7174 | |
| 50 | V | A | 0.0000 | |
| 51 | P | A | -0.3728 | |
| 52 | V | A | 0.0000 | |
| 53 | M | A | 0.1934 | |
| 54 | I | A | 0.0000 | |
| 55 | V | A | 0.0000 | |
| 56 | G | A | 0.0000 | |
| 57 | M | A | -1.1919 | |
| 58 | D | A | -2.7505 | |
| 59 | P | A | -2.4938 | |
| 60 | E | A | -3.2643 | |
| 61 | K | A | -3.0292 | |
| 62 | V | A | 0.0000 | |
| 63 | K | A | -3.1381 | |
| 64 | A | A | -2.9522 | |
| 65 | I | A | 0.0000 | |
| 66 | A | A | 0.0000 | |
| 67 | D | A | -3.4773 | |
| 68 | E | A | -3.2999 | |
| 69 | L | A | 0.0000 | |
| 70 | G | A | -1.9909 | |
| 71 | T | A | -1.5618 | |
| 72 | D | A | -1.8592 | |
| 73 | Y | A | -0.2030 | |
| 74 | Y | A | -0.1234 | |
| 75 | V | A | -0.3625 | |
| 76 | A | A | -1.3818 | |
| 77 | L | A | 0.0000 | |
| 78 | D | A | -2.5031 | |
| 79 | R | A | -1.9197 | |
| 80 | F | A | 0.3811 | |
| 81 | G | A | -0.8059 | |
| 82 | D | A | -1.4845 | |
| 83 | A | A | -1.7522 | |
| 84 | E | A | -2.6599 | |
| 85 | T | A | -1.9291 | |
| 86 | L | A | 0.0000 | |
| 87 | K | A | -2.7088 | |
| 88 | K | A | -3.0338 | |
| 89 | I | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | E | A | -3.0279 | |
| 92 | S | A | -2.3151 | |
| 93 | L | A | 0.0000 | |
| 94 | K | A | -3.7512 | |
| 95 | D | A | -3.6803 | |
| 96 | K | A | -3.2345 | |
| 97 | K | A | -3.4890 | |
| 98 | R | A | -2.8096 | |
| 99 | I | A | 0.0000 | |
| 100 | L | A | 0.0000 | |
| 101 | V | A | 0.0000 | |
| 102 | A | A | 0.0000 | |
| 103 | L | A | 0.0000 | |
| 104 | G | A | -0.5305 | |
| 105 | S | A | -0.7640 | |
| 106 | A | A | -0.3159 | |
| 107 | E | A | 0.0000 | |
| 108 | D | A | -1.6493 | |
| 109 | T | A | -0.9835 | |
| 110 | F | A | 0.0000 | |
| 111 | I | A | 0.0000 | |
| 112 | E | A | -1.7623 | |
| 113 | V | A | 0.0000 | |
| 114 | A | A | 0.0000 | |
| 115 | L | A | 0.0000 | |
| 116 | K | A | -1.4386 | |
| 117 | L | A | -0.7976 | |
| 118 | G | A | -0.4008 | |
| 119 | H | A | -1.2128 | |
| 120 | K | A | -1.4766 | |
| 121 | I | A | 0.0000 | |
| 122 | T | A | -0.4362 | |
| 123 | D | A | -0.1815 | |
| 124 | L | A | 0.5631 | |
| 125 | R | A | 0.0000 | |
| 126 | V | A | 0.5574 | |
| 127 | Y | A | 0.0510 | |
| 128 | P | A | -0.9512 | |
| 129 | K | A | -1.9765 | |
| 130 | L | A | -1.6928 | |
| 131 | T | A | -1.7268 | |
| 132 | N | A | -2.6915 | |
| 133 | K | A | -3.6205 | |
| 134 | T | A | 0.0000 | |
| 135 | K | A | -3.9883 | |
| 136 | E | A | -4.3596 | |
| 137 | L | A | -3.5216 | |
| 138 | K | A | -3.1592 | |
| 139 | K | A | -3.6168 | |
| 140 | K | A | -3.2426 | |
| 141 | Y | A | -1.6480 | |
| 142 | P | A | -1.1980 | |
| 143 | V | A | 0.6428 |