Project name: design2

Status: done

Started: 2026-06-08 10:28:54
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Chain sequence(s) A: SREIILLDRATFERLAASELPDVIAAADFAILAAGRIGRTYGPLFVEAGVPVMIVGMDPEKVKAIADELGTDYYVALDRFGDAETLKKILESLKDKKRILVALGSAEDTFIEVALKLGHKITDLRVYPKLTNKTKELKKKYPV
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:04:53)
[INFO]       Main:     Simulation completed successfully.                                          (00:04:54)
Show buried residues

Minimal score value
-4.3596
Maximal score value
0.6428
Average score
-1.1874
Total score value
-169.8027

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 S A -1.3499
2 R A -2.7174
3 E A -2.1291
4 I A 0.0000
5 I A -0.2660
6 L A 0.0000
7 L A 0.0000
8 D A 0.0000
9 R A -1.7383
10 A A -1.0697
11 T A 0.0000
12 F A 0.0000
13 E A -2.4881
14 R A -2.7568
15 L A -2.0338
16 A A -1.6593
17 A A -1.2278
18 S A -1.7255
19 E A -2.6355
20 L A 0.0000
21 P A -1.7151
22 D A -2.3187
23 V A -1.2279
24 I A 0.0000
25 A A -0.8580
26 A A -0.9595
27 A A 0.0000
28 D A -1.5113
29 F A 0.0000
30 A A 0.0000
31 I A 0.0000
32 L A 0.0000
33 A A -0.4427
34 A A -1.2964
35 G A -1.6386
36 R A -2.5725
37 I A -1.6433
38 G A 0.0000
39 R A -2.6923
40 T A -1.5659
41 Y A 0.0000
42 G A 0.0000
43 P A -0.7717
44 L A -0.1785
45 F A 0.0000
46 V A -0.0314
47 E A -1.3868
48 A A -0.9661
49 G A -0.7174
50 V A 0.0000
51 P A -0.3728
52 V A 0.0000
53 M A 0.1934
54 I A 0.0000
55 V A 0.0000
56 G A 0.0000
57 M A -1.1919
58 D A -2.7505
59 P A -2.4938
60 E A -3.2643
61 K A -3.0292
62 V A 0.0000
63 K A -3.1381
64 A A -2.9522
65 I A 0.0000
66 A A 0.0000
67 D A -3.4773
68 E A -3.2999
69 L A 0.0000
70 G A -1.9909
71 T A -1.5618
72 D A -1.8592
73 Y A -0.2030
74 Y A -0.1234
75 V A -0.3625
76 A A -1.3818
77 L A 0.0000
78 D A -2.5031
79 R A -1.9197
80 F A 0.3811
81 G A -0.8059
82 D A -1.4845
83 A A -1.7522
84 E A -2.6599
85 T A -1.9291
86 L A 0.0000
87 K A -2.7088
88 K A -3.0338
89 I A 0.0000
90 L A 0.0000
91 E A -3.0279
92 S A -2.3151
93 L A 0.0000
94 K A -3.7512
95 D A -3.6803
96 K A -3.2345
97 K A -3.4890
98 R A -2.8096
99 I A 0.0000
100 L A 0.0000
101 V A 0.0000
102 A A 0.0000
103 L A 0.0000
104 G A -0.5305
105 S A -0.7640
106 A A -0.3159
107 E A 0.0000
108 D A -1.6493
109 T A -0.9835
110 F A 0.0000
111 I A 0.0000
112 E A -1.7623
113 V A 0.0000
114 A A 0.0000
115 L A 0.0000
116 K A -1.4386
117 L A -0.7976
118 G A -0.4008
119 H A -1.2128
120 K A -1.4766
121 I A 0.0000
122 T A -0.4362
123 D A -0.1815
124 L A 0.5631
125 R A 0.0000
126 V A 0.5574
127 Y A 0.0510
128 P A -0.9512
129 K A -1.9765
130 L A -1.6928
131 T A -1.7268
132 N A -2.6915
133 K A -3.6205
134 T A 0.0000
135 K A -3.9883
136 E A -4.3596
137 L A -3.5216
138 K A -3.1592
139 K A -3.6168
140 K A -3.2426
141 Y A -1.6480
142 P A -1.1980
143 V A 0.6428
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Laboratory of Theory of Biopolymers 2018