| Chain sequence(s) |
B: SRLREAELRLGNARAMVEWLRKQVEERKKDPSATEHQIYMFEWDLIMWERDAEEYEREVAELRAELEA
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:38)
[INFO] Main: Simulation completed successfully. (00:01:38)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | B | -2.0454 | |
| 2 | R | B | -3.2726 | |
| 3 | L | B | -2.9463 | |
| 4 | R | B | -3.2507 | |
| 5 | E | B | -3.1029 | |
| 6 | A | B | 0.0000 | |
| 7 | E | B | -2.1413 | |
| 8 | L | B | -1.0127 | |
| 9 | R | B | -2.8512 | |
| 10 | L | B | 0.0000 | |
| 11 | G | B | -1.8589 | |
| 12 | N | B | -2.1841 | |
| 13 | A | B | 0.0000 | |
| 14 | R | B | -3.5421 | |
| 15 | A | B | -2.0871 | |
| 16 | M | B | -1.5665 | |
| 17 | V | B | -2.4683 | |
| 18 | E | B | -2.9974 | |
| 19 | W | B | -1.2390 | |
| 20 | L | B | 0.0000 | |
| 21 | R | B | -3.5403 | |
| 22 | K | B | -3.7443 | |
| 23 | Q | B | -3.0373 | |
| 24 | V | B | 0.0000 | |
| 25 | E | B | -4.3035 | |
| 26 | E | B | -3.8677 | |
| 27 | R | B | -3.3208 | |
| 28 | K | B | -4.1277 | |
| 29 | K | B | -3.6726 | |
| 30 | D | B | -2.5182 | |
| 31 | P | B | -1.5007 | |
| 32 | S | B | -1.1693 | |
| 33 | A | B | -1.8616 | |
| 34 | T | B | -1.6765 | |
| 35 | E | B | -2.3391 | |
| 36 | H | B | -1.5661 | |
| 37 | Q | B | -1.1602 | |
| 38 | I | B | -1.2445 | |
| 39 | Y | B | 0.3959 | |
| 40 | M | B | 0.6070 | |
| 41 | F | B | 0.0841 | |
| 42 | E | B | 0.0552 | |
| 43 | W | B | 1.3683 | |
| 44 | D | B | -0.0688 | |
| 45 | L | B | 0.0000 | |
| 46 | I | B | 0.3545 | |
| 47 | M | B | -0.1445 | |
| 48 | W | B | -1.7976 | |
| 49 | E | B | -3.3216 | |
| 50 | R | B | -3.8127 | |
| 51 | D | B | -3.6998 | |
| 52 | A | B | -4.4598 | |
| 53 | E | B | -5.1363 | |
| 54 | E | B | -4.5373 | |
| 55 | Y | B | -4.2198 | |
| 56 | E | B | -5.0729 | |
| 57 | R | B | -4.6305 | |
| 58 | E | B | -4.2667 | |
| 59 | V | B | 0.0000 | |
| 60 | A | B | -3.0012 | |
| 61 | E | B | -3.7299 | |
| 62 | L | B | -3.2148 | |
| 63 | R | B | -2.9895 | |
| 64 | A | B | -2.3662 | |
| 65 | E | B | -2.4467 | |
| 66 | L | B | -0.8732 | |
| 67 | E | B | -2.1538 | |
| 68 | A | B | -1.1558 |