| Chain sequence(s) |
A: LQVDIVPSQGEISVGESKFFLCQVAGMLPTCEISWFSPNGEKLTPNQQRISVVWNDDSSSTLTIYNANIDDAGIYKCVVHGPCQPRLTWSLGLPEATVNVKIFQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:43)
[INFO] Main: Simulation completed successfully. (00:00:43)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | L | A | 0.3056 | |
| 2 | Q | A | -1.3485 | |
| 3 | V | A | -1.3749 | |
| 4 | D | A | -1.4647 | |
| 5 | I | A | 0.0000 | |
| 6 | V | A | 0.6893 | |
| 7 | P | A | -0.0254 | |
| 8 | S | A | -0.7122 | |
| 9 | Q | A | -1.7013 | |
| 10 | G | A | 0.0000 | |
| 11 | E | A | -2.4125 | |
| 12 | I | A | 0.0000 | |
| 13 | S | A | -1.0048 | |
| 14 | V | A | -0.6670 | |
| 15 | G | A | -1.4215 | |
| 16 | E | A | -2.2944 | |
| 17 | S | A | -1.0689 | |
| 18 | K | A | -0.3301 | |
| 19 | F | A | 1.9558 | |
| 20 | F | A | 0.0000 | |
| 21 | L | A | 0.7717 | |
| 22 | C | A | 0.0000 | |
| 23 | Q | A | -1.4929 | |
| 24 | V | A | 0.0000 | |
| 25 | A | A | -0.3111 | |
| 26 | G | A | 0.1835 | |
| 27 | M | A | 0.8396 | |
| 28 | L | A | 0.3592 | |
| 29 | P | A | -0.7164 | |
| 30 | T | A | -0.6032 | |
| 31 | C | A | 0.0000 | |
| 32 | E | A | -1.7912 | |
| 33 | I | A | 0.0000 | |
| 34 | S | A | 0.0000 | |
| 35 | W | A | 0.0000 | |
| 36 | F | A | -1.2774 | |
| 37 | S | A | -1.3431 | |
| 38 | P | A | -1.2034 | |
| 39 | N | A | -2.0646 | |
| 40 | G | A | -2.1921 | |
| 41 | E | A | -3.1757 | |
| 42 | K | A | -2.6734 | |
| 43 | L | A | 0.0000 | |
| 44 | T | A | -1.1680 | |
| 45 | P | A | -0.8721 | |
| 46 | N | A | -2.1201 | |
| 47 | Q | A | -2.2954 | |
| 48 | Q | A | -2.3136 | |
| 49 | R | A | -1.8503 | |
| 50 | I | A | 0.0000 | |
| 51 | S | A | -0.3192 | |
| 52 | V | A | 0.0000 | |
| 53 | V | A | 0.7545 | |
| 54 | W | A | -0.4859 | |
| 55 | N | A | -1.8560 | |
| 56 | D | A | -3.0177 | |
| 57 | D | A | -2.8587 | |
| 58 | S | A | -1.7307 | |
| 59 | S | A | -1.6312 | |
| 60 | S | A | 0.0000 | |
| 61 | T | A | 0.6950 | |
| 62 | L | A | 0.0000 | |
| 63 | T | A | 0.8722 | |
| 64 | I | A | 0.0000 | |
| 65 | Y | A | -0.7563 | |
| 66 | N | A | -2.1151 | |
| 67 | A | A | 0.0000 | |
| 68 | N | A | -1.1795 | |
| 69 | I | A | 0.1370 | |
| 70 | D | A | -1.3082 | |
| 71 | D | A | 0.0000 | |
| 72 | A | A | -0.5867 | |
| 73 | G | A | -0.1260 | |
| 74 | I | A | 0.5460 | |
| 75 | Y | A | 0.0000 | |
| 76 | K | A | -1.0211 | |
| 77 | C | A | 0.0000 | |
| 78 | V | A | 0.0000 | |
| 79 | V | A | 0.0000 | |
| 80 | H | A | -0.7543 | |
| 81 | G | A | -0.6275 | |
| 82 | P | A | -0.7700 | |
| 83 | C | A | -0.2855 | |
| 84 | Q | A | 0.0000 | |
| 85 | P | A | -0.2487 | |
| 86 | R | A | -0.9314 | |
| 87 | L | A | 1.1614 | |
| 88 | T | A | 1.2285 | |
| 89 | W | A | 1.4113 | |
| 90 | S | A | 1.1366 | |
| 91 | L | A | 1.9841 | |
| 92 | G | A | 0.7935 | |
| 93 | L | A | 0.3407 | |
| 94 | P | A | -0.5393 | |
| 95 | E | A | -1.8988 | |
| 96 | A | A | -1.3418 | |
| 97 | T | A | -0.5892 | |
| 98 | V | A | 0.0000 | |
| 99 | N | A | -0.9615 | |
| 100 | V | A | 0.0000 | |
| 101 | K | A | -1.1866 | |
| 102 | I | A | -0.6427 | |
| 103 | F | A | 0.1979 | |
| 104 | Q | A | -0.3118 |