| Chain sequence(s) |
A: FKGH
C: FKGH B: FKGH D: FKGH input PDB |
| Selected Chain(s) | A,C,B,D |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:26)
[INFO] Main: Simulation completed successfully. (00:00:27)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | F | A | 1.5616 | |
| 2 | K | A | -0.9191 | |
| 3 | G | A | -1.0636 | |
| 4 | H | A | -1.8651 | |
| 1 | F | B | 2.1509 | |
| 2 | K | B | -0.3133 | |
| 3 | G | B | -1.0169 | |
| 4 | H | B | -2.1327 | |
| 1 | F | C | 2.2131 | |
| 2 | K | C | -0.2922 | |
| 3 | G | C | -1.0470 | |
| 4 | H | C | -2.1888 | |
| 1 | F | D | 1.6189 | |
| 2 | K | D | -0.8508 | |
| 3 | G | D | -1.3515 | |
| 4 | H | D | -1.9596 |