| Chain sequence(s) |
H: QVQLVESGGGLVQAGGSLRLSCVASGLTFIEYGMGWFRQAPGKEREFVSAISWSGGSTYYADSVKGRFTISREHAKNTVYLQMNSLKPEDTAVYYCAASRRAGWSNIPAHDYDYWGQGTQVTVSS
input PDB |
| Selected Chain(s) | H |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with H chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:28)
[INFO] Main: Simulation completed successfully. (00:01:29)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -1.6072 | |
| 2 | V | H | 0.0000 | |
| 3 | Q | H | -1.1076 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 1.3366 | |
| 6 | E | H | 0.3811 | |
| 7 | S | H | -0.2172 | |
| 8 | G | H | -0.9985 | |
| 9 | G | H | -0.6000 | |
| 11 | G | H | 0.1035 | |
| 12 | L | H | 1.1665 | |
| 13 | V | H | 0.1169 | |
| 14 | Q | H | -1.1933 | |
| 15 | A | H | -1.5161 | |
| 16 | G | H | -1.2731 | |
| 17 | G | H | -0.8553 | |
| 18 | S | H | -1.0819 | |
| 19 | L | H | -0.6628 | |
| 20 | R | H | -1.7398 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.0991 | |
| 23 | C | H | 0.0000 | |
| 24 | V | H | 0.7234 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -0.8154 | |
| 27 | G | H | -1.2434 | |
| 28 | L | H | -0.7200 | |
| 29 | T | H | -0.0753 | |
| 30 | F | H | 0.0000 | |
| 35 | I | H | 1.4260 | |
| 36 | E | H | -0.3668 | |
| 37 | Y | H | 0.0000 | |
| 38 | G | H | 0.0000 | |
| 39 | M | H | 0.0000 | |
| 40 | G | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | F | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -1.8145 | |
| 45 | A | H | -1.7594 | |
| 46 | P | H | -1.3540 | |
| 47 | G | H | -1.9171 | |
| 48 | K | H | -3.2270 | |
| 49 | E | H | -3.3025 | |
| 50 | R | H | -2.2303 | |
| 51 | E | H | -1.3395 | |
| 52 | F | H | 0.0713 | |
| 53 | V | H | 0.0000 | |
| 54 | S | H | 0.0000 | |
| 55 | A | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | S | H | 0.0000 | |
| 58 | W | H | 0.4924 | |
| 59 | S | H | -0.0741 | |
| 62 | G | H | -0.3620 | |
| 63 | G | H | -0.6222 | |
| 64 | S | H | -0.1395 | |
| 65 | T | H | 0.1699 | |
| 66 | Y | H | 0.5522 | |
| 67 | Y | H | -0.3439 | |
| 68 | A | H | -0.9837 | |
| 69 | D | H | -2.4286 | |
| 70 | S | H | -1.7399 | |
| 71 | V | H | 0.0000 | |
| 72 | K | H | -2.5360 | |
| 74 | G | H | -1.7432 | |
| 75 | R | H | -1.5990 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -0.7552 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.3839 | |
| 80 | R | H | 0.0000 | |
| 81 | E | H | -1.3394 | |
| 82 | H | H | -1.0267 | |
| 83 | A | H | -1.2505 | |
| 84 | K | H | -2.0632 | |
| 85 | N | H | -1.0262 | |
| 86 | T | H | 0.0000 | |
| 87 | V | H | 0.0000 | |
| 88 | Y | H | -0.3585 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -1.0869 | |
| 91 | M | H | 0.0000 | |
| 92 | N | H | -1.3125 | |
| 93 | S | H | -1.1712 | |
| 94 | L | H | 0.0000 | |
| 95 | K | H | -2.0850 | |
| 96 | P | H | -1.7199 | |
| 97 | E | H | -2.2135 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.7413 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | -0.2633 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | -0.0913 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | A | H | 0.0000 | |
| 107 | S | H | 0.0000 | |
| 108 | R | H | -2.9556 | |
| 109 | R | H | -2.9066 | |
| 110 | A | H | -1.1215 | |
| 111 | G | H | 0.0000 | |
| 111A | W | H | 1.0770 | |
| 111B | S | H | 0.7897 | |
| 112C | N | H | 0.0000 | |
| 112B | I | H | 1.4354 | |
| 112A | P | H | 0.1527 | |
| 112 | A | H | -0.5627 | |
| 113 | H | H | -1.2467 | |
| 114 | D | H | -1.4991 | |
| 115 | Y | H | 0.0000 | |
| 116 | D | H | -2.3138 | |
| 117 | Y | H | -0.9824 | |
| 118 | W | H | -0.1934 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -0.8914 | |
| 121 | G | H | -0.4700 | |
| 122 | T | H | -0.4959 | |
| 123 | Q | H | -0.5728 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | -0.1296 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.7184 | |
| 128 | S | H | -0.7805 |