Chain sequence(s) |
H: QVQLVQSGSELKQPGASVKVSCKASGYTFTHYALHWLRQAPGQGLEWMGWLNTNTENPTFAQGFTGRFVFSLDTSVTTAYLQISSLKAEDTAVYYCARGDMVVPTTIWNYYHFMDVWGQGTTVTVSS
L: DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPPTFGQGTKVEIK input PDB |
Selected Chain(s) | H,L |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:49) [INFO] Main: Simulation completed successfully. (00:00:51) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | Q | H | -1.3546 | |
2 | V | H | -0.7647 | |
3 | Q | H | -1.0697 | |
4 | L | H | 0.0000 | |
5 | V | H | 0.7838 | |
6 | Q | H | 0.0000 | |
7 | S | H | -0.4715 | |
8 | G | H | -0.7126 | |
9 | S | H | -0.4116 | |
11 | E | H | -0.3403 | |
12 | L | H | 0.6494 | |
13 | K | H | -0.8196 | |
14 | Q | H | -1.7190 | |
15 | P | H | -1.6431 | |
16 | G | H | -1.4405 | |
17 | A | H | -0.9550 | |
18 | S | H | -0.9687 | |
19 | V | H | 0.0000 | |
20 | K | H | -1.1454 | |
21 | V | H | 0.0000 | |
22 | S | H | -0.3132 | |
23 | C | H | 0.0000 | |
24 | K | H | -0.3624 | |
25 | A | H | 0.0000 | |
26 | S | H | -0.5259 | |
27 | G | H | -0.8815 | |
28 | Y | H | -0.4124 | |
29 | T | H | -0.2698 | |
30 | F | H | 0.0000 | |
35 | T | H | -0.9305 | |
36 | H | H | -0.7566 | |
37 | Y | H | 0.0213 | |
38 | A | H | 0.0000 | |
39 | L | H | 0.0000 | |
40 | H | H | 0.0000 | |
41 | W | H | 0.0000 | |
42 | L | H | 0.0000 | |
43 | R | H | -0.4387 | |
44 | Q | H | 0.0000 | |
45 | A | H | -0.9535 | |
46 | P | H | -0.9779 | |
47 | G | H | -1.2135 | |
48 | Q | H | -1.8060 | |
49 | G | H | -1.2688 | |
50 | L | H | 0.0000 | |
51 | E | H | -0.8069 | |
52 | W | H | 0.0000 | |
53 | M | H | 0.0000 | |
54 | G | H | 0.0000 | |
55 | W | H | -0.0499 | |
56 | L | H | 0.0000 | |
57 | N | H | -1.5143 | |
58 | T | H | 0.0000 | |
59 | N | H | -1.9989 | |
62 | T | H | -1.6987 | |
63 | E | H | -2.2076 | |
64 | N | H | -2.1042 | |
65 | P | H | -0.7412 | |
66 | T | H | -0.1160 | |
67 | F | H | 0.1516 | |
68 | A | H | -0.8645 | |
69 | Q | H | -1.5758 | |
70 | G | H | -1.0339 | |
71 | F | H | -0.4055 | |
72 | T | H | -0.5812 | |
74 | G | H | -0.6795 | |
75 | R | H | -0.8299 | |
76 | F | H | 0.0000 | |
77 | V | H | 0.7907 | |
78 | F | H | 0.0000 | |
79 | S | H | -0.4326 | |
80 | L | H | -0.6572 | |
81 | D | H | -0.4415 | |
82 | T | H | -0.4639 | |
83 | S | H | 0.1998 | |
84 | V | H | 0.7684 | |
85 | T | H | 0.0568 | |
86 | T | H | 0.0000 | |
87 | A | H | 0.0000 | |
88 | Y | H | -0.1143 | |
89 | L | H | 0.0000 | |
90 | Q | H | -0.5796 | |
91 | I | H | 0.0000 | |
92 | S | H | -0.8885 | |
93 | S | H | -1.2247 | |
94 | L | H | 0.0000 | |
95 | K | H | -2.6972 | |
96 | A | H | -1.9938 | |
97 | E | H | -2.3336 | |
98 | D | H | 0.0000 | |
99 | T | H | -0.8407 | |
100 | A | H | 0.0000 | |
101 | V | H | -0.1615 | |
102 | Y | H | 0.0000 | |
103 | Y | H | 0.0000 | |
104 | C | H | 0.0000 | |
105 | A | H | 0.0000 | |
106 | R | H | 0.0000 | |
107 | G | H | 0.0000 | |
108 | D | H | 0.4369 | |
109 | M | H | 0.9918 | |
110 | V | H | 1.8354 | |
111 | V | H | 2.0273 | |
111A | P | H | 1.0743 | |
111B | T | H | 0.8818 | |
111C | T | H | 1.2522 | |
112D | I | H | 2.2093 | |
112C | W | H | 2.1968 | |
112B | N | H | 1.4416 | |
112A | Y | H | 1.8171 | |
112 | Y | H | 1.1149 | |
113 | H | H | 0.5415 | |
114 | F | H | 0.0000 | |
115 | M | H | 0.0000 | |
116 | D | H | -0.3652 | |
117 | V | H | -0.4518 | |
118 | W | H | 0.0000 | |
119 | G | H | 0.0000 | |
120 | Q | H | -1.2509 | |
121 | G | H | -0.8107 | |
122 | T | H | 0.0000 | |
123 | T | H | -0.1594 | |
124 | V | H | 0.0000 | |
125 | T | H | -0.3800 | |
126 | V | H | 0.0000 | |
127 | S | H | -0.9398 | |
128 | S | H | -0.6573 | |
1 | D | L | -2.2003 | |
2 | I | L | 0.0000 | |
3 | Q | L | -2.1590 | |
4 | M | L | 0.0000 | |
5 | T | L | -1.3391 | |
6 | Q | L | 0.0000 | |
7 | S | L | -0.7415 | |
8 | P | L | -0.5467 | |
9 | S | L | -0.6840 | |
10 | S | L | -0.6091 | |
11 | L | L | -0.2628 | |
12 | S | L | -0.3733 | |
13 | A | L | 0.0000 | |
14 | S | L | -0.0607 | |
15 | V | L | 0.6571 | |
16 | G | L | -0.5693 | |
17 | D | L | -1.5534 | |
18 | R | L | -2.2035 | |
19 | V | L | 0.0000 | |
20 | T | L | -0.6722 | |
21 | I | L | 0.0000 | |
22 | T | L | -0.7803 | |
23 | C | L | 0.0000 | |
24 | R | L | -2.6939 | |
25 | A | L | 0.0000 | |
26 | S | L | -1.7300 | |
27 | Q | L | -1.5718 | |
28 | S | L | -1.0323 | |
29 | I | L | 0.0000 | |
36 | S | L | -0.4694 | |
37 | S | L | -0.1087 | |
38 | Y | L | 0.5759 | |
39 | L | L | 0.0000 | |
40 | N | L | 0.0000 | |
41 | W | L | 0.0000 | |
42 | Y | L | 0.0000 | |
43 | Q | L | -0.4493 | |
44 | Q | L | -1.0087 | |
45 | K | L | -1.4056 | |
46 | P | L | -1.1749 | |
47 | G | L | -1.7057 | |
48 | K | L | -2.4545 | |
49 | A | L | -1.5066 | |
50 | P | L | 0.0000 | |
51 | K | L | -0.9460 | |
52 | L | L | 0.0000 | |
53 | L | L | 0.0000 | |
54 | I | L | 0.0000 | |
55 | Y | L | 0.3229 | |
56 | A | L | 0.2511 | |
57 | A | L | 0.0000 | |
65 | S | L | -0.2463 | |
66 | S | L | 0.0650 | |
67 | L | L | 0.2711 | |
68 | Q | L | -0.1703 | |
69 | S | L | -0.4061 | |
70 | G | L | -0.5850 | |
71 | V | L | -0.2349 | |
72 | P | L | -0.3710 | |
74 | S | L | -0.3715 | |
75 | R | L | -0.6766 | |
76 | F | L | 0.0000 | |
77 | S | L | -0.2865 | |
78 | G | L | -0.2587 | |
79 | S | L | -0.6601 | |
80 | G | L | -1.0654 | |
83 | S | L | -1.0226 | |
84 | G | L | -1.0640 | |
85 | T | L | -1.5886 | |
86 | D | L | -2.0513 | |
87 | F | L | 0.0000 | |
88 | T | L | -0.7391 | |
89 | L | L | 0.0000 | |
90 | T | L | -0.6497 | |
91 | I | L | 0.0000 | |
92 | S | L | -1.3124 | |
93 | S | L | -1.1732 | |
94 | L | L | 0.0000 | |
95 | Q | L | -1.1331 | |
96 | P | L | -0.6853 | |
97 | E | L | -1.7934 | |
98 | D | L | 0.0000 | |
99 | F | L | 0.1905 | |
100 | A | L | 0.0000 | |
101 | T | L | -0.7533 | |
102 | Y | L | 0.0000 | |
103 | Y | L | 0.0000 | |
104 | C | L | 0.0000 | |
105 | Q | L | 0.0000 | |
106 | Q | L | 0.0000 | |
107 | S | L | 0.0000 | |
108 | Y | L | 0.8438 | |
109 | S | L | -0.0134 | |
114 | T | L | -0.5463 | |
115 | P | L | -0.7869 | |
116 | P | L | 0.0000 | |
117 | T | L | -0.7608 | |
118 | F | L | 0.0000 | |
119 | G | L | 0.0000 | |
120 | Q | L | -1.3308 | |
121 | G | L | 0.0000 | |
122 | T | L | 0.0000 | |
123 | K | L | -0.6368 | |
124 | V | L | 0.0000 | |
125 | E | L | -0.0861 | |
126 | I | L | 1.0498 | |
127 | K | L | -0.7876 |