Project name: CFHR5_A3D_Analysis

Status: done

Started: 2026-07-23 09:42:43
Settings
Chain sequence(s) A: MLLLFSVILISWVSTVGGEGTLCDFPKIHHGFLYDEEDYNPFSQVPTGEVFYYSCEYNFVSPSKSFWTRITCTEEGWSPTPKCLRMCSFPFVKNGHSESSGLIHLEGDTVQIICNTGYSLQNNEKNISCVERGWSTPPICSFTKGECHVPILEANVDAQPKKESYKVGDVLKFSCRKNLIRVGSDSVQCYQFGWSPNFPTCKGQVRSCGPPPQLSNGEVKEIRKEEYGHNEVVEYDCNPNFIINGPKKIQCVDGEWTTLPTCVEQVKTCGYIPELEYGYVQPSVPPYQHGVSVEVNCRNEYAMIGNNMITCINGIWTELPMCVATHQLKRCKIAGVNIKTLLKLSGKEFNHNSRIRYRCSDIFRYRHSVCINGKWNPEVDCTEKREQFCPPPPQIPNAQNMTTTVNYQDGEKVAVLCKENYLLPEAKEIVCKDGRWQSLPRCVESTAYCGPPPSINNGDTTSFPLSVYPPGSTVTYRCQSFYKLQGSVTVTCRNKQWSEPPRCLDPCVVSEENMNKNNIQLKWRNDGKLYAKTGDAVEFQCKFPHKAMISSPPFRAICQEGKFEYPICE
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:07:17)
[INFO]       Main:     Simulation completed successfully.                                          (00:07:21)
Show buried residues

Minimal score value
-4.4142
Maximal score value
4.3393
Average score
-0.9409
Total score value
-535.3736

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 2.3519
2 L A 3.3703
3 L A 3.7818
4 L A 3.8688
5 F A 3.8722
6 S A 2.8689
7 V A 4.0139
8 I A 4.3393
9 L A 4.0419
10 I A 4.0032
11 S A 2.4782
12 W A 2.6324
13 V A 2.6566
14 S A 1.4593
15 T A 1.1938
16 V A 1.3405
17 G A -0.4102
18 G A -1.1497
19 E A -2.0078
20 G A -1.6284
21 T A -1.4841
22 L A -1.0414
23 C A 0.0000
24 D A -1.9617
25 F A -1.0738
26 P A 0.0000
27 K A -2.1734
28 I A -1.3879
29 H A -1.7302
30 H A -1.3361
31 G A -0.8487
32 F A -0.2768
33 L A 0.0000
34 Y A -0.0984
35 D A -2.7307
36 E A -2.9610
37 E A -3.8588
38 D A -3.3676
39 Y A -1.8893
40 N A -2.3002
41 P A -0.7082
42 F A 0.5783
43 S A -0.4064
44 Q A -1.1886
45 V A 0.0000
46 P A -0.8496
47 T A -1.2329
48 G A -0.9762
49 E A -0.7901
50 V A -0.3085
51 F A 0.0000
52 Y A 0.4286
53 Y A 0.0000
54 S A 0.0000
55 C A -0.1844
56 E A -0.5786
57 Y A 0.3917
58 N A -0.8769
59 F A -0.8233
60 V A -0.3754
61 S A 0.0000
62 P A -1.0227
63 S A -1.1040
64 K A -1.3445
65 S A -0.2452
66 F A 1.4741
67 W A 0.7755
68 T A 0.0000
69 R A -1.3002
70 I A 0.0000
71 T A -0.8010
72 C A 0.0000
73 T A -1.6696
74 E A -2.7154
75 E A -2.6284
76 G A -1.7065
77 W A -1.1434
78 S A -0.9846
79 P A -0.8702
80 T A -0.5306
81 P A -1.2355
82 K A -1.6676
83 C A 0.0000
84 L A -0.9496
85 R A -1.2108
86 M A 0.0008
87 C A 0.0000
88 S A 0.7394
89 F A 0.0000
90 P A 1.0889
91 F A 1.3766
92 V A 0.5219
93 K A -1.2070
94 N A -0.9681
95 G A -0.6012
96 H A -1.2004
97 S A 0.0000
98 E A -1.7027
99 S A -0.3082
100 S A 0.3070
101 G A 0.6687
102 L A 1.7824
103 I A 2.3423
104 H A 0.8339
105 L A -0.0826
106 E A -1.2353
107 G A -1.1504
108 D A -0.9816
109 T A -1.0361
110 V A 0.0000
111 Q A -1.8925
112 I A 0.0000
113 I A -0.4602
114 C A -0.6524
115 N A -1.4703
116 T A -0.6095
117 G A -0.9066
118 Y A -0.2685
119 S A -1.0331
120 L A 0.0000
121 Q A -1.3904
122 N A -2.5008
123 N A -2.8699
124 E A -3.0388
125 K A -2.8392
126 N A -2.3511
127 I A 0.0000
128 S A -0.8260
129 C A 0.0000
130 V A -1.0275
131 E A -2.0224
132 R A -2.4162
133 G A -1.3312
134 W A -0.6506
135 S A -0.5368
136 T A -0.2321
137 P A 0.3387
138 P A 0.5255
139 I A 1.7424
140 C A 0.0000
141 S A -0.2839
142 F A -0.5978
143 T A -1.5767
144 K A -2.4121
145 G A -2.2443
146 E A -2.9982
147 C A 0.0000
148 H A -1.2489
149 V A -0.1699
150 P A 0.6102
151 I A 1.7057
152 L A 0.3559
153 E A -1.3564
154 A A -0.8816
155 N A -1.9632
156 V A 0.0000
157 D A -1.8512
158 A A 0.0000
159 Q A -2.7183
160 P A -2.5286
161 K A -3.3132
162 K A -3.1086
163 E A -2.9823
164 S A -2.4849
165 Y A 0.0000
166 K A -2.5100
167 V A -1.1783
168 G A -0.8408
169 D A -0.7960
170 V A -0.7291
171 L A 0.0000
172 K A -2.3685
173 F A 0.0000
174 S A -1.5910
175 C A -1.7613
176 R A -2.7647
177 K A -2.8954
178 N A -2.4458
179 L A -1.5614
180 I A -0.6302
181 R A -0.8838
182 V A -0.2185
183 G A -0.3708
184 S A 0.0000
185 D A -1.0438
186 S A 0.0000
187 V A 0.0000
188 Q A 0.0000
189 C A 0.0000
190 Y A 0.0000
191 Q A -1.5391
192 F A -0.3384
193 G A 0.0000
194 W A -0.2366
195 S A 0.0000
196 P A 0.0000
197 N A -1.2015
198 F A -0.4399
199 P A 0.0000
200 T A -0.5962
201 C A -1.3375
202 K A -1.3306
203 G A -1.4887
204 Q A -1.7256
205 V A -1.4565
206 R A -2.4773
207 S A -2.2724
208 C A 0.0000
209 G A -2.6095
210 P A -2.5060
211 P A 0.0000
212 P A -0.8593
213 Q A -1.6598
214 L A -1.4838
215 S A -1.2895
216 N A -2.3023
217 G A -2.5344
218 E A -3.5106
219 V A -2.6752
220 K A -2.9797
221 E A -2.0718
222 I A -0.1883
223 R A -2.8692
224 K A -3.6304
225 E A -4.0058
226 E A -3.8587
227 Y A 0.0000
228 G A -1.8706
229 H A -2.0092
230 N A -1.5873
231 E A -1.9197
232 V A -1.1206
233 V A 0.0000
234 E A -2.2882
235 Y A 0.0000
236 D A -2.8022
237 C A -2.2212
238 N A -2.4857
239 P A -1.5282
240 N A -1.5184
241 F A -1.2249
242 I A -0.3327
243 I A -0.2211
244 N A 0.0000
245 G A -0.7185
246 P A 0.0000
247 K A -1.2542
248 K A -1.3216
249 I A 0.0000
250 Q A -1.1769
251 C A 0.0000
252 V A -1.3351
253 D A -1.7587
254 G A -1.9920
255 E A -2.2541
256 W A 0.0000
257 T A 0.0000
258 T A -0.6009
259 L A -0.2680
260 P A 0.0000
261 T A -0.3681
262 C A -0.8096
263 V A -0.6761
264 E A -1.9957
265 Q A -1.2388
266 V A -0.0357
267 K A -1.2881
268 T A -0.4987
269 C A 0.0000
270 G A 0.3591
271 Y A 1.1222
272 I A 0.7798
273 P A -0.7284
274 E A -1.7687
275 L A 0.0000
276 E A -1.7841
277 Y A -0.7757
278 G A 0.0000
279 Y A -0.1222
280 V A -0.4771
281 Q A -1.2135
282 P A -0.0738
283 S A 0.4579
284 V A 1.7123
285 P A 0.6940
286 P A -0.2156
287 Y A 0.0000
288 Q A -0.9809
289 H A 0.0000
290 G A -0.4267
291 V A 0.0392
292 S A -0.0796
293 V A -0.5661
294 E A -1.4956
295 V A 0.0000
296 N A -0.6105
297 C A -0.8426
298 R A -2.2241
299 N A -2.6838
300 E A -2.6854
301 Y A -1.2406
302 A A -0.6678
303 M A 0.1612
304 I A 0.2551
305 G A -1.0056
306 N A -1.9824
307 N A -1.7187
308 M A -1.1169
309 I A 0.0000
310 T A 0.3283
311 C A 0.0000
312 I A 1.2671
313 N A 0.1663
314 G A 0.2985
315 I A 1.7708
316 W A 1.0967
317 T A -0.1913
318 E A -1.6471
319 L A -0.9553
320 P A 0.0000
321 M A 0.3897
322 C A 0.0000
323 V A -0.4771
324 A A 0.0000
325 T A -1.5968
326 H A -1.9706
327 Q A -2.1721
328 L A -2.1150
329 K A -3.7309
330 R A -4.3065
331 C A 0.0000
332 K A -3.4902
333 I A 0.0000
334 A A -1.0328
335 G A -0.6683
336 V A -0.4521
337 N A -1.7541
338 I A -1.5062
339 K A -1.6177
340 T A -0.5584
341 L A 1.0175
342 L A 0.4915
343 K A -1.5092
344 L A 0.0000
345 S A -1.7222
346 G A -2.0918
347 K A -2.9484
348 E A -3.2697
349 F A -2.8900
350 N A -3.0828
351 H A -2.5060
352 N A -2.0576
353 S A -2.0220
354 R A -2.7958
355 I A 0.0000
356 R A -2.0168
357 Y A 0.0000
358 R A -1.2937
359 C A 0.0000
360 S A -1.4250
361 D A -1.9510
362 I A -0.3736
363 F A 0.7588
364 R A -0.7105
365 Y A -0.4375
366 R A -1.4789
367 H A -2.4543
368 S A 0.0000
369 V A -2.1838
370 C A 0.0000
371 I A -1.6806
372 N A -2.1586
373 G A -2.9626
374 K A -2.9163
375 W A 0.0000
376 N A -2.5893
377 P A -2.2910
378 E A -2.8021
379 V A -1.5129
380 D A -1.5584
381 C A -1.5021
382 T A -2.0383
383 E A -3.6846
384 K A -4.3167
385 R A -4.2972
386 E A -4.4142
387 Q A -3.7248
388 F A -1.8900
389 C A 0.0000
390 P A 0.0000
391 P A 0.0000
392 P A 0.0000
393 P A 0.0000
394 Q A -0.9865
395 I A 0.0000
396 P A -1.0135
397 N A -1.5925
398 A A 0.0000
399 Q A -1.7887
400 N A -1.8143
401 M A 0.0000
402 T A -0.7125
403 T A 0.0000
404 T A -0.4203
405 V A -0.4496
406 N A -0.4216
407 Y A 0.0000
408 Q A -2.9204
409 D A -4.0531
410 G A -2.6621
411 E A -2.6907
412 K A -2.7322
413 V A 0.0000
414 A A -1.0591
415 V A 0.0000
416 L A -0.4876
417 C A -1.1289
418 K A -1.8797
419 E A -1.8753
420 N A -1.7531
421 Y A -1.1212
422 L A -0.3861
423 L A -0.6437
424 P A -1.0897
425 E A -2.4177
426 A A -1.8736
427 K A -2.1573
428 E A -2.4613
429 I A 0.0000
430 V A -2.2593
431 C A 0.0000
432 K A -3.8665
433 D A -3.7151
434 G A 0.0000
435 R A -2.1995
436 W A 0.0000
437 Q A -1.6685
438 S A -1.2378
439 L A -0.8262
440 P A -1.5455
441 R A -2.0852
442 C A 0.0000
443 V A -0.6321
444 E A -1.7333
445 S A -1.0793
446 T A -0.5044
447 A A -1.1129
448 Y A -0.1224
449 C A 0.0000
450 G A -0.0418
451 P A 0.2759
452 P A 0.0000
453 P A -0.8283
454 S A -0.9425
455 I A -1.6621
456 N A -2.3353
457 N A -2.3002
458 G A -2.7640
459 D A -2.7100
460 T A -1.0357
461 T A -0.6653
462 S A 0.4876
463 F A 1.3115
464 P A 0.5515
465 L A 0.9368
466 S A 0.8147
467 V A 1.5302
468 Y A 0.0000
469 P A -0.3832
470 P A -1.3789
471 G A -1.0925
472 S A -0.3603
473 T A -0.2969
474 V A 0.0000
475 T A -0.5422
476 Y A 0.0000
477 R A -2.7865
478 C A -2.4570
479 Q A -2.0904
480 S A -0.4957
481 F A 0.5743
482 Y A -1.4257
483 K A -2.2746
484 L A -1.7888
485 Q A -2.0115
486 G A -1.6062
487 S A -0.8779
488 V A -0.4289
489 T A -0.3105
490 V A 0.0000
491 T A -1.0035
492 C A 0.0000
493 R A -2.7693
494 N A -2.6250
495 K A -2.7335
496 Q A -2.8052
497 W A -1.8977
498 S A -1.4989
499 E A -2.2557
500 P A -1.5027
501 P A 0.0000
502 R A -3.1624
503 C A 0.0000
504 L A 0.0000
505 D A -3.0484
506 P A -1.5068
507 C A 0.0000
508 V A 0.3361
509 V A 0.0000
510 S A -2.1985
511 E A -3.9184
512 E A -3.8403
513 N A -2.7349
514 M A 0.0000
515 N A -3.0412
516 K A -2.9656
517 N A 0.0000
518 N A -2.0113
519 I A 0.0000
520 Q A -1.8805
521 L A 0.0000
522 K A -1.5249
523 W A -0.7618
524 R A -2.9717
525 N A -3.2284
526 D A -3.6960
527 G A -3.2937
528 K A -2.6993
529 L A -0.9010
530 Y A 0.8624
531 A A 0.0000
532 K A -1.3211
533 T A 0.0000
534 G A -1.2891
535 D A -0.9316
536 A A -0.5349
537 V A 0.0000
538 E A -1.2194
539 F A 0.0000
540 Q A -0.9546
541 C A -0.9314
542 K A -0.7164
543 F A 0.8206
544 P A -0.0718
545 H A -1.4020
546 K A -1.9168
547 A A -0.7107
548 M A 0.3902
549 I A 1.7051
550 S A 0.8554
551 S A 0.3277
552 P A -0.4180
553 P A -0.8418
554 F A -0.8985
555 R A -1.9421
556 A A 0.0000
557 I A -0.5795
558 C A 0.0000
559 Q A -3.1423
560 E A -3.7176
561 G A -2.6046
562 K A -2.9391
563 F A -1.8283
564 E A -2.1401
565 Y A -1.1637
566 P A 0.0000
567 I A -0.6066
568 C A 0.0000
569 E A -2.0704
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Laboratory of Theory of Biopolymers 2018