| Chain sequence(s) |
A: QVQLQESGGGLVQAGDSLRLSCAASGRTFSTTGMGWFRQAPGKEREFVAAVSWRSGNTYYADSVKGRFTISRDNAKTTVFLQMNSLKPEDTAVYYCAANPTGSYGAATSRYNYWGQGTQVTVSS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:11)
[INFO] Main: Simulation completed successfully. (00:01:12)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | A | -1.7482 | |
| 2 | V | A | -1.5955 | |
| 3 | Q | A | -1.8540 | |
| 4 | L | A | 0.0000 | |
| 5 | Q | A | -1.7483 | |
| 6 | E | A | 0.0000 | |
| 7 | S | A | -1.0754 | |
| 8 | G | A | -0.9927 | |
| 9 | G | A | -0.8216 | |
| 10 | G | A | -0.0711 | |
| 11 | L | A | 1.0460 | |
| 12 | V | A | -0.1630 | |
| 13 | Q | A | -1.4730 | |
| 14 | A | A | -1.7129 | |
| 15 | G | A | -1.7033 | |
| 16 | D | A | -1.7718 | |
| 17 | S | A | -1.5969 | |
| 18 | L | A | -1.1791 | |
| 19 | R | A | -2.0434 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.8215 | |
| 22 | C | A | 0.0000 | |
| 23 | A | A | -1.0380 | |
| 24 | A | A | 0.0000 | |
| 25 | S | A | -1.4873 | |
| 26 | G | A | -1.9310 | |
| 27 | R | A | -2.2626 | |
| 28 | T | A | -1.2531 | |
| 29 | F | A | 0.0000 | |
| 30 | S | A | -1.2118 | |
| 31 | T | A | -0.8965 | |
| 32 | T | A | 0.0000 | |
| 33 | G | A | 0.0000 | |
| 34 | M | A | 0.0000 | |
| 35 | G | A | 0.0000 | |
| 36 | W | A | 0.0000 | |
| 37 | F | A | 0.0000 | |
| 38 | R | A | -1.3617 | |
| 39 | Q | A | -2.1969 | |
| 40 | A | A | -2.0626 | |
| 41 | P | A | -1.4410 | |
| 42 | G | A | -1.9658 | |
| 43 | K | A | -3.3492 | |
| 44 | E | A | -3.5118 | |
| 45 | R | A | -2.6630 | |
| 46 | E | A | -1.9179 | |
| 47 | F | A | -0.6938 | |
| 48 | V | A | 0.0000 | |
| 49 | A | A | 0.0000 | |
| 50 | A | A | 0.0000 | |
| 51 | V | A | 0.0000 | |
| 52 | S | A | 0.0000 | |
| 53 | W | A | -1.2148 | |
| 54 | R | A | -2.1245 | |
| 55 | S | A | -1.5994 | |
| 56 | G | A | -1.4426 | |
| 57 | N | A | -1.4562 | |
| 58 | T | A | -0.2620 | |
| 59 | Y | A | 0.2374 | |
| 60 | Y | A | -0.4536 | |
| 61 | A | A | -1.2208 | |
| 62 | D | A | -2.3634 | |
| 63 | S | A | -1.8026 | |
| 64 | V | A | 0.0000 | |
| 65 | K | A | -2.5373 | |
| 66 | G | A | -1.8064 | |
| 67 | R | A | -1.5334 | |
| 68 | F | A | 0.0000 | |
| 69 | T | A | -0.7333 | |
| 70 | I | A | 0.0000 | |
| 71 | S | A | -0.6382 | |
| 72 | R | A | -1.0638 | |
| 73 | D | A | -1.6741 | |
| 74 | N | A | -2.1009 | |
| 75 | A | A | -1.5885 | |
| 76 | K | A | -2.2561 | |
| 77 | T | A | -1.8215 | |
| 78 | T | A | 0.0000 | |
| 79 | V | A | 0.0000 | |
| 80 | F | A | -0.4841 | |
| 81 | L | A | 0.0000 | |
| 82 | Q | A | -1.1719 | |
| 83 | M | A | 0.0000 | |
| 84 | N | A | -1.6356 | |
| 85 | S | A | -1.4827 | |
| 86 | L | A | 0.0000 | |
| 87 | K | A | -2.4810 | |
| 88 | P | A | -1.8820 | |
| 89 | E | A | -2.3245 | |
| 90 | D | A | 0.0000 | |
| 91 | T | A | -0.9600 | |
| 92 | A | A | 0.0000 | |
| 93 | V | A | -0.6601 | |
| 94 | Y | A | 0.0000 | |
| 95 | Y | A | -0.6503 | |
| 96 | C | A | 0.0000 | |
| 97 | A | A | 0.0000 | |
| 98 | A | A | 0.0000 | |
| 99 | N | A | 0.0000 | |
| 100 | P | A | -0.6501 | |
| 101 | T | A | -0.6602 | |
| 102 | G | A | -0.7149 | |
| 103 | S | A | -0.6297 | |
| 104 | Y | A | -0.2570 | |
| 105 | G | A | 0.0160 | |
| 106 | A | A | -0.0539 | |
| 107 | A | A | -0.5625 | |
| 108 | T | A | -1.0130 | |
| 109 | S | A | -1.3460 | |
| 110 | R | A | -2.2039 | |
| 111 | Y | A | 0.0000 | |
| 112 | N | A | -1.5087 | |
| 113 | Y | A | -0.6234 | |
| 114 | W | A | -0.3966 | |
| 115 | G | A | -0.9563 | |
| 116 | Q | A | -1.6172 | |
| 117 | G | A | -1.0890 | |
| 118 | T | A | 0.0000 | |
| 119 | Q | A | -1.2055 | |
| 120 | V | A | 0.0000 | |
| 121 | T | A | -0.2983 | |
| 122 | V | A | 0.0000 | |
| 123 | S | A | -0.8225 | |
| 124 | S | A | -0.8451 |