| Chain sequence(s) |
A: GPPRLNPGPPLRSTDDYVTPTDLLYIAETDLLTETGHPTKDIVVNGKVLVKRVSAYQWKVFKLKLPDPNTLPLPSEDFIDRSTEILIWQLKAYYIGRGGPLGKGSYGHPNFNALGDIDNPTSYQTGSADDTQNLSWYPKYKQLYIVGDLPPLGKYIAPAPPAPGLPPGAEPPTTEVTTTIEHGDMADIGYGAKDYAALEPRKNEVPDIILDTTTKVPDFDGMKADPYGRRMFDYNEYEKSKDSKTYVLDGPDLNPLPSTNPPSPLYTPPPASSPYATPPSTRVYTLPDQGEIKEEDLIFNKPVFLEKTAGLNNGVLWHNQLYVTVLDNSRAEIKTIKTQISTPETNVYDPSNYVTSKEYSEEYRLSLIVQLCKIPLTPETLAYLERLDPSILVNANLPDIPPVERPDPYAGKKFREIDLTDKLSSDLEKYPLGRWYLNR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:05)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.9500 | |
| 2 | P | A | -0.8489 | |
| 3 | P | A | -1.1135 | |
| 4 | R | A | -1.7675 | |
| 5 | L | A | -0.2100 | |
| 6 | N | A | -1.3864 | |
| 7 | P | A | -1.0503 | |
| 8 | G | A | -0.7752 | |
| 9 | P | A | -0.7228 | |
| 10 | P | A | -0.2934 | |
| 11 | L | A | 0.3749 | |
| 12 | R | A | -1.1136 | |
| 13 | S | A | -1.2949 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.9480 | |
| 16 | D | A | -2.8157 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | T | A | -0.9434 | |
| 20 | P | A | -0.9315 | |
| 21 | T | A | -0.9049 | |
| 22 | D | A | -1.6174 | |
| 23 | L | A | -0.4815 | |
| 24 | L | A | -0.2577 | |
| 25 | Y | A | -0.1983 | |
| 26 | I | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | E | A | -0.8143 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -1.5778 | |
| 31 | L | A | -0.2474 | |
| 32 | L | A | -0.4022 | |
| 33 | T | A | -0.5055 | |
| 34 | E | A | -0.7386 | |
| 35 | T | A | -0.6975 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -1.9045 | |
| 38 | P | A | 0.0000 | |
| 39 | T | A | -1.6961 | |
| 40 | K | A | -2.4321 | |
| 41 | D | A | -1.4000 | |
| 42 | I | A | 0.9141 | |
| 43 | V | A | 1.9484 | |
| 44 | V | A | 1.5862 | |
| 45 | N | A | -0.6082 | |
| 46 | G | A | -0.4625 | |
| 47 | K | A | -0.2454 | |
| 48 | V | A | 1.5385 | |
| 49 | L | A | 2.1825 | |
| 50 | V | A | 0.7410 | |
| 51 | K | A | -1.3301 | |
| 52 | R | A | -1.8396 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | A | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | K | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | K | A | -1.7537 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.9154 | |
| 65 | L | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -0.9561 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -0.9156 | |
| 70 | T | A | -0.3599 | |
| 71 | L | A | -0.0468 | |
| 72 | P | A | -0.3433 | |
| 73 | L | A | -0.5091 | |
| 74 | P | A | -0.7385 | |
| 75 | S | A | -1.5687 | |
| 76 | E | A | -2.8878 | |
| 77 | D | A | -3.1081 | |
| 78 | F | A | -1.7441 | |
| 79 | I | A | 0.0000 | |
| 80 | D | A | -3.2742 | |
| 81 | R | A | -3.1746 | |
| 82 | S | A | -1.9471 | |
| 83 | T | A | -1.3756 | |
| 84 | E | A | -1.6353 | |
| 85 | I | A | 0.0000 | |
| 86 | L | A | 0.0000 | |
| 87 | I | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | Q | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | K | A | -0.6780 | |
| 92 | A | A | 0.0000 | |
| 93 | Y | A | 0.0000 | |
| 94 | Y | A | -0.4785 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | 0.0000 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6590 | |
| 99 | G | A | -0.7983 | |
| 100 | P | A | -0.5049 | |
| 101 | L | A | -0.5058 | |
| 102 | G | A | -0.8861 | |
| 103 | K | A | -1.1970 | |
| 104 | G | A | 0.0000 | |
| 105 | S | A | -0.2679 | |
| 106 | Y | A | 0.0000 | |
| 107 | G | A | -0.7012 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | -1.7998 | |
| 110 | N | A | -2.6549 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | 0.0000 | |
| 113 | A | A | 0.0000 | |
| 114 | L | A | -0.5323 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.0374 | |
| 117 | I | A | -0.5793 | |
| 118 | D | A | -2.3885 | |
| 119 | N | A | -2.2345 | |
| 120 | P | A | -1.2105 | |
| 121 | T | A | -0.7585 | |
| 122 | S | A | -0.3955 | |
| 123 | Y | A | 0.1246 | |
| 124 | Q | A | -0.4714 | |
| 125 | T | A | -0.4885 | |
| 126 | G | A | -1.1153 | |
| 127 | S | A | -1.1555 | |
| 128 | A | A | -1.0962 | |
| 129 | D | A | -2.3453 | |
| 130 | D | A | -1.7882 | |
| 131 | T | A | -1.9733 | |
| 132 | Q | A | -2.3932 | |
| 133 | N | A | -2.2695 | |
| 134 | L | A | -1.1145 | |
| 135 | S | A | -0.5175 | |
| 136 | W | A | 0.0000 | |
| 137 | Y | A | 0.0071 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | -1.2036 | |
| 140 | Y | A | 0.0000 | |
| 141 | K | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | Y | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | D | A | 0.0000 | |
| 149 | L | A | 0.0561 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | L | A | -0.1442 | |
| 153 | G | A | 0.0000 | |
| 154 | K | A | -0.5450 | |
| 155 | Y | A | -0.5051 | |
| 156 | I | A | -0.4513 | |
| 157 | A | A | -0.4674 | |
| 158 | P | A | -0.4712 | |
| 159 | A | A | -0.4728 | |
| 160 | P | A | -0.4882 | |
| 161 | P | A | -0.6056 | |
| 162 | A | A | -0.2184 | |
| 163 | P | A | -0.3595 | |
| 164 | G | A | -0.3106 | |
| 165 | L | A | -0.0636 | |
| 166 | P | A | -0.4717 | |
| 167 | P | A | -0.7209 | |
| 168 | G | A | -0.8371 | |
| 169 | A | A | -0.8632 | |
| 170 | E | A | -1.9266 | |
| 171 | P | A | -1.2319 | |
| 172 | P | A | -0.7387 | |
| 173 | T | A | -0.7748 | |
| 174 | T | A | -0.8232 | |
| 175 | E | A | -1.5838 | |
| 176 | V | A | -0.5838 | |
| 177 | T | A | -0.3232 | |
| 178 | T | A | -0.1793 | |
| 179 | T | A | -0.4211 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | -1.2135 | |
| 182 | H | A | -1.3138 | |
| 183 | G | A | -0.7736 | |
| 184 | D | A | -0.7272 | |
| 185 | M | A | 0.0000 | |
| 186 | A | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | -0.5360 | |
| 190 | Y | A | 0.0000 | |
| 191 | G | A | -0.3001 | |
| 192 | A | A | -0.5120 | |
| 193 | K | A | -0.8255 | |
| 194 | D | A | -0.6711 | |
| 195 | Y | A | 0.0000 | |
| 196 | A | A | -1.2474 | |
| 197 | A | A | -0.5397 | |
| 198 | L | A | -0.6086 | |
| 199 | E | A | -1.4246 | |
| 200 | P | A | -1.5855 | |
| 201 | R | A | -2.2325 | |
| 202 | K | A | -2.4089 | |
| 203 | N | A | 0.0000 | |
| 204 | E | A | -1.0854 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | D | A | -1.4635 | |
| 208 | I | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | L | A | -1.5094 | |
| 211 | D | A | -1.8459 | |
| 212 | T | A | -1.0269 | |
| 213 | T | A | -0.6290 | |
| 214 | T | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | V | A | 0.1057 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | -0.8917 | |
| 219 | F | A | -1.1960 | |
| 220 | D | A | -2.3895 | |
| 221 | G | A | -1.6522 | |
| 222 | M | A | 0.0000 | |
| 223 | K | A | -2.4684 | |
| 224 | A | A | -1.5090 | |
| 225 | D | A | -1.1654 | |
| 226 | P | A | -0.4169 | |
| 227 | Y | A | -0.0852 | |
| 228 | G | A | 0.0000 | |
| 229 | R | A | 0.0000 | |
| 230 | R | A | -0.4829 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | D | A | -0.3970 | |
| 234 | Y | A | -0.0851 | |
| 235 | N | A | -0.6585 | |
| 236 | E | A | -1.0362 | |
| 237 | Y | A | -0.9838 | |
| 238 | E | A | -1.9880 | |
| 239 | K | A | -1.8349 | |
| 240 | S | A | -2.2498 | |
| 241 | K | A | -3.0470 | |
| 242 | D | A | -3.0550 | |
| 243 | S | A | -2.1189 | |
| 244 | K | A | -2.2710 | |
| 245 | T | A | -0.9750 | |
| 246 | Y | A | -0.0458 | |
| 247 | V | A | 0.0000 | |
| 248 | L | A | 0.0000 | |
| 249 | D | A | -0.8131 | |
| 250 | G | A | -0.6742 | |
| 251 | P | A | -0.5767 | |
| 252 | D | A | -0.5918 | |
| 253 | L | A | -0.0474 | |
| 254 | N | A | -1.0616 | |
| 255 | P | A | -0.6471 | |
| 256 | L | A | 0.2475 | |
| 257 | P | A | -0.3249 | |
| 258 | S | A | -0.6732 | |
| 259 | T | A | -0.7519 | |
| 260 | N | A | -1.6166 | |
| 261 | P | A | -1.2311 | |
| 262 | P | A | -0.6641 | |
| 263 | S | A | 0.0000 | |
| 264 | P | A | 0.4745 | |
| 265 | L | A | 1.5635 | |
| 266 | Y | A | 0.8954 | |
| 267 | T | A | 0.1771 | |
| 268 | P | A | -0.0676 | |
| 269 | P | A | -0.0139 | |
| 270 | P | A | -0.2142 | |
| 271 | A | A | -0.0684 | |
| 272 | S | A | -0.1692 | |
| 273 | S | A | 0.0509 | |
| 274 | P | A | 0.1719 | |
| 275 | Y | A | 0.8183 | |
| 276 | A | A | 0.2488 | |
| 277 | T | A | 0.1592 | |
| 278 | P | A | 0.0167 | |
| 279 | P | A | -0.3121 | |
| 280 | S | A | -0.4364 | |
| 281 | T | A | -0.2484 | |
| 282 | R | A | -0.0216 | |
| 283 | V | A | 1.2591 | |
| 284 | Y | A | 0.6703 | |
| 285 | T | A | -0.6788 | |
| 286 | L | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | D | A | -1.7290 | |
| 289 | Q | A | 0.0000 | |
| 290 | G | A | -1.8813 | |
| 291 | E | A | -2.6473 | |
| 292 | I | A | -2.1717 | |
| 293 | K | A | -3.4001 | |
| 294 | E | A | -3.5480 | |
| 295 | E | A | -3.2352 | |
| 296 | D | A | -2.2499 | |
| 297 | L | A | -1.5751 | |
| 298 | I | A | -0.9117 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.3227 | |
| 301 | K | A | -1.6761 | |
| 302 | P | A | -0.5121 | |
| 303 | V | A | -0.1129 | |
| 304 | F | A | -0.4444 | |
| 305 | L | A | 0.0000 | |
| 306 | E | A | -2.6000 | |
| 307 | K | A | -2.8090 | |
| 308 | T | A | 0.0000 | |
| 309 | A | A | -0.6374 | |
| 310 | G | A | -0.5895 | |
| 311 | L | A | -0.4116 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | -1.2296 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | L | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.8424 | |
| 319 | N | A | -1.0541 | |
| 320 | Q | A | -1.2141 | |
| 321 | L | A | 0.0000 | |
| 322 | Y | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | L | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | S | A | 0.0000 | |
| 330 | R | A | 0.0000 | |
| 331 | A | A | 0.0000 | |
| 332 | E | A | -1.9642 | |
| 333 | I | A | -1.6532 | |
| 334 | K | A | -2.3025 | |
| 335 | T | A | -1.4874 | |
| 336 | I | A | -0.4663 | |
| 337 | K | A | -1.0772 | |
| 338 | T | A | -0.0403 | |
| 339 | Q | A | 0.0256 | |
| 340 | I | A | 1.6652 | |
| 341 | S | A | 0.4516 | |
| 342 | T | A | -0.5027 | |
| 343 | P | A | -0.8226 | |
| 344 | E | A | -2.0297 | |
| 345 | T | A | -0.8935 | |
| 346 | N | A | -0.6581 | |
| 347 | V | A | 1.2172 | |
| 348 | Y | A | 1.3512 | |
| 349 | D | A | -0.3185 | |
| 350 | P | A | 0.1451 | |
| 351 | S | A | 0.0867 | |
| 352 | N | A | 0.1077 | |
| 353 | Y | A | 0.8098 | |
| 354 | V | A | 1.3292 | |
| 355 | T | A | -0.1732 | |
| 356 | S | A | -0.8768 | |
| 357 | K | A | -2.0585 | |
| 358 | E | A | -1.6542 | |
| 359 | Y | A | 0.0000 | |
| 360 | S | A | -0.9092 | |
| 361 | E | A | 0.0000 | |
| 362 | E | A | -0.8419 | |
| 363 | Y | A | 0.0000 | |
| 364 | R | A | -1.3332 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | 0.0000 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | V | A | 0.0000 | |
| 370 | Q | A | -0.3724 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.6018 | |
| 374 | I | A | 0.0000 | |
| 375 | P | A | -0.8514 | |
| 376 | L | A | -0.5458 | |
| 377 | T | A | -0.6552 | |
| 378 | P | A | -0.9703 | |
| 379 | E | A | -1.9645 | |
| 380 | T | A | 0.0000 | |
| 381 | L | A | -0.8252 | |
| 382 | A | A | -1.2813 | |
| 383 | Y | A | 0.0000 | |
| 384 | L | A | 0.0000 | |
| 385 | E | A | -2.4017 | |
| 386 | R | A | -1.8558 | |
| 387 | L | A | -0.8778 | |
| 388 | D | A | -1.0951 | |
| 389 | P | A | -1.2217 | |
| 390 | S | A | -1.2789 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | 0.0000 | |
| 393 | V | A | -1.1585 | |
| 394 | N | A | -1.5149 | |
| 395 | A | A | -1.3828 | |
| 396 | N | A | -1.9972 | |
| 397 | L | A | -1.5105 | |
| 398 | P | A | -1.4895 | |
| 399 | D | A | -1.8398 | |
| 400 | I | A | -0.4994 | |
| 401 | P | A | -0.4044 | |
| 402 | P | A | -0.6299 | |
| 403 | V | A | 0.2807 | |
| 404 | E | A | -2.1211 | |
| 405 | R | A | -2.3934 | |
| 406 | P | A | -1.8702 | |
| 407 | D | A | -2.1620 | |
| 408 | P | A | -1.2204 | |
| 409 | Y | A | -0.9882 | |
| 410 | A | A | -1.1631 | |
| 411 | G | A | -1.4353 | |
| 412 | K | A | -2.0820 | |
| 413 | K | A | -2.6347 | |
| 414 | F | A | -1.7345 | |
| 415 | R | A | -1.7496 | |
| 416 | E | A | -2.9054 | |
| 417 | I | A | 0.0000 | |
| 418 | D | A | -3.2389 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.9523 | |
| 421 | D | A | -2.3988 | |
| 422 | K | A | -1.7345 | |
| 423 | L | A | -0.6889 | |
| 424 | S | A | -0.9261 | |
| 425 | S | A | -1.0851 | |
| 426 | D | A | -2.5142 | |
| 427 | L | A | 0.0000 | |
| 428 | E | A | -3.2759 | |
| 429 | K | A | -3.1389 | |
| 430 | Y | A | -1.7377 | |
| 431 | P | A | -0.9715 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -2.1205 | |
| 435 | W | A | -0.5603 | |
| 436 | Y | A | -0.4310 | |
| 437 | L | A | -0.4534 | |
| 438 | N | A | -1.8394 | |
| 439 | R | A | -1.9726 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine