| Chain sequence(s) |
A: MSRRNTDAITIHSILDWIEDNLESPLSLEKVSERSGYSKWHLQRMFKKETGHSLGQYIRSRKMTEIAQKLKESNEPILY
B: MSRRNTDAITIHSILDWIEDNLESPLSLEKVSERSGYSKWHLQRMFKKETGHSLGQYIRSRKMTEIAQKLKESNEPILY input PDB |
| Selected Chain(s) | A,B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:31)
[INFO] Main: Simulation completed successfully. (00:03:32)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.3429 | |
| 2 | S | A | -1.3595 | |
| 3 | R | A | -3.1488 | |
| 4 | R | A | -3.8599 | |
| 5 | N | A | -3.1347 | |
| 6 | T | A | -2.0074 | |
| 7 | D | A | -1.8778 | |
| 8 | A | A | -0.2856 | |
| 9 | I | A | 0.0000 | |
| 10 | T | A | 0.0000 | |
| 11 | I | A | 0.0000 | |
| 12 | H | A | -1.6635 | |
| 13 | S | A | -0.7451 | |
| 14 | I | A | 0.0000 | |
| 15 | L | A | 0.0000 | |
| 16 | D | A | -2.6111 | |
| 17 | W | A | -1.7162 | |
| 18 | I | A | 0.0000 | |
| 19 | E | A | -2.5719 | |
| 20 | D | A | -2.9284 | |
| 21 | N | A | -2.1664 | |
| 22 | L | A | 0.0000 | |
| 23 | E | A | -2.4269 | |
| 24 | S | A | -1.3889 | |
| 25 | P | A | -0.7893 | |
| 26 | L | A | 0.0000 | |
| 27 | S | A | -1.1778 | |
| 28 | L | A | -1.4647 | |
| 29 | E | A | -2.8629 | |
| 30 | K | A | -2.4619 | |
| 31 | V | A | 0.0000 | |
| 32 | S | A | -2.5270 | |
| 33 | E | A | -3.3594 | |
| 34 | R | A | -3.0657 | |
| 35 | S | A | -2.3733 | |
| 36 | G | A | -2.0498 | |
| 37 | Y | A | -1.0699 | |
| 38 | S | A | -1.3012 | |
| 39 | K | A | -1.9805 | |
| 40 | W | A | -0.4618 | |
| 41 | H | A | -1.0972 | |
| 42 | L | A | 0.0000 | |
| 43 | Q | A | -2.1026 | |
| 44 | R | A | -2.9481 | |
| 45 | M | A | -2.0363 | |
| 46 | F | A | 0.0000 | |
| 47 | K | A | -3.1697 | |
| 48 | K | A | -3.0849 | |
| 49 | E | A | -1.8084 | |
| 50 | T | A | 0.0000 | |
| 51 | G | A | -1.7400 | |
| 52 | H | A | -1.5728 | |
| 53 | S | A | -1.6949 | |
| 54 | L | A | 0.0000 | |
| 55 | G | A | -1.1637 | |
| 56 | Q | A | -1.4052 | |
| 57 | Y | A | 0.0000 | |
| 58 | I | A | 0.0000 | |
| 59 | R | A | -2.2753 | |
| 60 | S | A | 0.0000 | |
| 61 | R | A | 0.0000 | |
| 62 | K | A | -1.5754 | |
| 63 | M | A | 0.0000 | |
| 64 | T | A | 0.0000 | |
| 65 | E | A | -1.6263 | |
| 66 | I | A | -0.4577 | |
| 67 | A | A | 0.0000 | |
| 68 | Q | A | -2.1078 | |
| 69 | K | A | -2.5897 | |
| 70 | L | A | -1.9823 | |
| 71 | K | A | -3.0174 | |
| 72 | E | A | -3.3623 | |
| 73 | S | A | -2.3957 | |
| 74 | N | A | -2.1688 | |
| 75 | E | A | -1.9304 | |
| 76 | P | A | -0.2408 | |
| 77 | I | A | 1.3965 | |
| 78 | L | A | 0.9839 | |
| 79 | Y | A | 1.5641 | |
| 1 | M | B | 0.3471 | |
| 2 | S | B | -1.4092 | |
| 3 | R | B | -3.1978 | |
| 4 | R | B | -3.9093 | |
| 5 | N | B | -3.1399 | |
| 6 | T | B | -2.0362 | |
| 7 | D | B | -1.8638 | |
| 8 | A | B | -0.3116 | |
| 9 | I | B | 0.0000 | |
| 10 | T | B | 0.0000 | |
| 11 | I | B | 0.0000 | |
| 12 | H | B | -1.8067 | |
| 13 | S | B | -0.7973 | |
| 14 | I | B | 0.0000 | |
| 15 | L | B | 0.0000 | |
| 16 | D | B | -2.6254 | |
| 17 | W | B | -1.7786 | |
| 18 | I | B | 0.0000 | |
| 19 | E | B | -2.4642 | |
| 20 | D | B | -2.8626 | |
| 21 | N | B | -2.0739 | |
| 22 | L | B | -2.0051 | |
| 23 | E | B | -2.4448 | |
| 24 | S | B | -1.3381 | |
| 25 | P | B | -0.7243 | |
| 26 | L | B | 0.0000 | |
| 27 | S | B | -1.1114 | |
| 28 | L | B | -1.4442 | |
| 29 | E | B | -2.7889 | |
| 30 | K | B | -2.5250 | |
| 31 | V | B | 0.0000 | |
| 32 | S | B | -2.6343 | |
| 33 | E | B | -3.5788 | |
| 34 | R | B | -3.5658 | |
| 35 | S | B | -2.6505 | |
| 36 | G | B | -2.2085 | |
| 37 | Y | B | -1.3482 | |
| 38 | S | B | -1.2409 | |
| 39 | K | B | -1.8350 | |
| 40 | W | B | -0.3367 | |
| 41 | H | B | -0.9511 | |
| 42 | L | B | 0.0000 | |
| 43 | Q | B | -1.9282 | |
| 44 | R | B | -2.7042 | |
| 45 | M | B | -1.8449 | |
| 46 | F | B | 0.0000 | |
| 47 | K | B | -3.0292 | |
| 48 | K | B | -3.0501 | |
| 49 | E | B | -1.9368 | |
| 50 | T | B | 0.0000 | |
| 51 | G | B | -1.7315 | |
| 52 | H | B | -1.5351 | |
| 53 | S | B | -1.6354 | |
| 54 | L | B | 0.0000 | |
| 55 | G | B | -1.1370 | |
| 56 | Q | B | -1.3857 | |
| 57 | Y | B | 0.0000 | |
| 58 | I | B | 0.0000 | |
| 59 | R | B | -2.2330 | |
| 60 | S | B | 0.0000 | |
| 61 | R | B | 0.0000 | |
| 62 | K | B | -1.4123 | |
| 63 | M | B | 0.0000 | |
| 64 | T | B | 0.0000 | |
| 65 | E | B | -1.4943 | |
| 66 | I | B | -0.1209 | |
| 67 | A | B | 0.0000 | |
| 68 | Q | B | -1.9966 | |
| 69 | K | B | -2.4895 | |
| 70 | L | B | -1.8049 | |
| 71 | K | B | -2.8332 | |
| 72 | E | B | -3.2919 | |
| 73 | S | B | -2.3326 | |
| 74 | N | B | -2.0962 | |
| 75 | E | B | -1.8473 | |
| 76 | P | B | -0.0785 | |
| 77 | I | B | 1.6694 | |
| 78 | L | B | 1.2561 | |
| 79 | Y | B | 1.7111 |