| Chain sequence(s) |
H: EVQLVESGGGLVQPGGSLRLSCAASGSIFSINAMGWYRQAPGKQRELVAVITSGGSTIYADSVKGRFTISRDNAKNTVYLQMNSLRPEDTAVYYCNAHVGLKVPTIQELSLGFGSWGQGTLVTVSS
input PDB |
| Selected Chain(s) | H |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with H chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:56)
[INFO] Main: Simulation completed successfully. (00:00:57)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -2.2357 | |
| 2 | V | H | 0.0000 | |
| 3 | Q | H | -1.3861 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 1.1018 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.1436 | |
| 8 | G | H | -0.6275 | |
| 9 | G | H | 0.2574 | |
| 11 | G | H | 0.9412 | |
| 12 | L | H | 1.5088 | |
| 13 | V | H | 0.0331 | |
| 14 | Q | H | -1.3265 | |
| 15 | P | H | -1.5863 | |
| 16 | G | H | -1.3736 | |
| 17 | G | H | -0.8909 | |
| 18 | S | H | -0.9865 | |
| 19 | L | H | -0.4838 | |
| 20 | R | H | -1.2535 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.1961 | |
| 23 | C | H | 0.0000 | |
| 24 | A | H | -0.2825 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -0.7711 | |
| 27 | G | H | -0.9501 | |
| 28 | S | H | -0.2025 | |
| 29 | I | H | 0.6285 | |
| 30 | F | H | 2.2373 | |
| 35 | S | H | 1.1478 | |
| 36 | I | H | 0.0000 | |
| 37 | N | H | 0.0983 | |
| 38 | A | H | -0.5972 | |
| 39 | M | H | 0.0000 | |
| 40 | G | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | Y | H | 0.3125 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.9083 | |
| 45 | A | H | 0.0000 | |
| 46 | P | H | -0.9400 | |
| 47 | G | H | -1.3148 | |
| 48 | K | H | -1.8966 | |
| 49 | Q | H | -2.1189 | |
| 50 | R | H | -1.5250 | |
| 51 | E | H | -0.8232 | |
| 52 | L | H | 0.5442 | |
| 53 | V | H | 0.0000 | |
| 54 | A | H | 0.0000 | |
| 55 | V | H | 0.9704 | |
| 56 | I | H | 0.0000 | |
| 57 | T | H | -0.4664 | |
| 58 | S | H | -0.7394 | |
| 59 | G | H | -0.8509 | |
| 63 | G | H | -0.8382 | |
| 64 | S | H | -0.1181 | |
| 65 | T | H | 0.8022 | |
| 66 | I | H | 1.8230 | |
| 67 | Y | H | 0.3576 | |
| 68 | A | H | -0.7293 | |
| 69 | D | H | -2.2459 | |
| 70 | S | H | -1.7149 | |
| 71 | V | H | 0.0000 | |
| 72 | K | H | -2.3076 | |
| 74 | G | H | -1.7068 | |
| 75 | R | H | -1.4197 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -0.4177 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.5497 | |
| 80 | R | H | -1.4293 | |
| 81 | D | H | -2.1886 | |
| 82 | N | H | -2.4101 | |
| 83 | A | H | -1.7799 | |
| 84 | K | H | -2.6116 | |
| 85 | N | H | -2.0193 | |
| 86 | T | H | 0.0000 | |
| 87 | V | H | 0.0000 | |
| 88 | Y | H | -0.4371 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -0.8163 | |
| 91 | M | H | 0.0000 | |
| 92 | N | H | -1.2064 | |
| 93 | S | H | -1.2041 | |
| 94 | L | H | 0.0000 | |
| 95 | R | H | -2.3123 | |
| 96 | P | H | -1.9144 | |
| 97 | E | H | -2.3302 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.4339 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | 0.7769 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.4314 | |
| 104 | C | H | 0.0000 | |
| 105 | N | H | 0.0000 | |
| 106 | A | H | 0.0000 | |
| 107 | H | H | -0.7991 | |
| 108 | V | H | 0.1966 | |
| 109 | G | H | 0.0000 | |
| 110 | L | H | 1.3116 | |
| 111 | K | H | -0.0377 | |
| 111A | V | H | 1.1845 | |
| 111B | P | H | 0.1471 | |
| 111C | T | H | 0.2803 | |
| 112D | I | H | 0.5834 | |
| 112C | Q | H | 0.1213 | |
| 112B | E | H | -0.7027 | |
| 112A | L | H | 0.9567 | |
| 112 | S | H | 0.7569 | |
| 113 | L | H | 1.4044 | |
| 114 | G | H | 0.2603 | |
| 115 | F | H | 0.9271 | |
| 116 | G | H | -0.2474 | |
| 117 | S | H | -0.5899 | |
| 118 | W | H | 0.0720 | |
| 119 | G | H | -0.2210 | |
| 120 | Q | H | -0.5524 | |
| 121 | G | H | 0.0000 | |
| 122 | T | H | 0.6459 | |
| 123 | L | H | 1.6592 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | 0.3748 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.8026 | |
| 128 | S | H | -0.8870 |