| Chain sequence(s) |
A: KWCFRVCYRVICYRRCR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:32)
[INFO] Main: Simulation completed successfully. (00:00:33)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | K | A | -1.4154 | |
| 2 | W | A | 0.1177 | |
| 3 | C | A | -0.5126 | |
| 4 | F | A | -0.7469 | |
| 5 | R | A | -1.9135 | |
| 6 | V | A | -0.0624 | |
| 7 | C | A | 1.6230 | |
| 8 | Y | A | 2.2132 | |
| 9 | R | A | 0.4831 | |
| 10 | V | A | 2.5200 | |
| 11 | I | A | 3.5028 | |
| 12 | C | A | 2.0950 | |
| 13 | Y | A | 0.2188 | |
| 14 | R | A | -2.3498 | |
| 15 | R | A | -2.5093 | |
| 16 | C | A | -1.3778 | |
| 17 | R | A | -1.8408 |