| Chain sequence(s) |
B: MEEELKEAKELAKKFGEWLKKNPELVNKVSVKVEGLSEEEQKVFQEEYEKYKKEVLKKLKGSGC
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:04:07)
[INFO] Main: Simulation completed successfully. (00:04:08)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | B | -0.9858 | |
| 2 | E | B | -3.2117 | |
| 3 | E | B | -4.1437 | |
| 4 | E | B | -4.1261 | |
| 5 | L | B | -3.4274 | |
| 6 | K | B | -3.8285 | |
| 7 | E | B | -4.0262 | |
| 8 | A | B | 0.0000 | |
| 9 | K | B | -3.1199 | |
| 10 | E | B | -2.7548 | |
| 11 | L | B | -1.7516 | |
| 12 | A | B | 0.0000 | |
| 13 | K | B | -2.5195 | |
| 14 | K | B | -2.3672 | |
| 15 | F | B | -0.9227 | |
| 16 | G | B | 0.0000 | |
| 17 | E | B | -2.5522 | |
| 18 | W | B | -1.4090 | |
| 19 | L | B | 0.0000 | |
| 20 | K | B | -3.0582 | |
| 21 | K | B | -2.6941 | |
| 22 | N | B | -2.0143 | |
| 23 | P | B | -2.5241 | |
| 24 | E | B | -2.4914 | |
| 25 | L | B | -1.6755 | |
| 26 | V | B | 0.0000 | |
| 27 | N | B | -2.0390 | |
| 28 | K | B | -2.2015 | |
| 29 | V | B | -0.9939 | |
| 30 | S | B | -0.7972 | |
| 31 | V | B | -0.6961 | |
| 32 | K | B | -2.0699 | |
| 33 | V | B | -1.5947 | |
| 34 | E | B | -2.2956 | |
| 35 | G | B | -1.6287 | |
| 36 | L | B | -2.1288 | |
| 37 | S | B | -2.3083 | |
| 38 | E | B | -3.3058 | |
| 39 | E | B | -3.5938 | |
| 40 | E | B | -3.2755 | |
| 41 | Q | B | -3.2953 | |
| 42 | K | B | -3.5581 | |
| 43 | V | B | -3.0247 | |
| 44 | F | B | 0.0000 | |
| 45 | Q | B | -3.2332 | |
| 46 | E | B | -3.5885 | |
| 47 | E | B | -2.9554 | |
| 48 | Y | B | 0.0000 | |
| 49 | E | B | -3.5735 | |
| 50 | K | B | -3.6900 | |
| 51 | Y | B | -3.0254 | |
| 52 | K | B | -2.6638 | |
| 53 | K | B | -3.0380 | |
| 54 | E | B | -3.1593 | |
| 55 | V | B | 0.0000 | |
| 56 | L | B | 0.0000 | |
| 57 | K | B | -3.2907 | |
| 58 | K | B | -3.2955 | |
| 59 | L | B | -2.4840 | |
| 60 | K | B | -2.5820 | |
| 61 | G | B | -1.6805 | |
| 62 | S | B | -1.4182 | |
| 63 | G | B | -0.6730 | |
| 64 | C | B | -0.1444 |