| Chain sequence(s) |
A: MGSSHHHHHHSSGENLYKQGAMAVERNSGDLQLPQEIAMLVPNKTQVVPKSGGEGKVKDIFASPALVRAGGVMIAFVEGRTKNKLFPEVIDLSSSDIVAGYIKAPETWQSLVAEVTKEYWQAHTVLESANNSNHRVGVARLPTGITRGNKVFLLVGSYEERREIDDYIWKAEAWNIKVIEGEATQSTEVQPTQPINWSEPKPLFQTDSPNNKGDLKEFLGGGGSGIVMGNGTLVFPLTAKDESNKVFSLITYSTDDGQKWEIPGGVSSVACRSPRVTEWEEGTLLMVTYCEDGRKVFESRDMGKTWTEAFGTLPGVWLKSGPELPEVSLRVDALITATIEGRKVMLYTQKVRHKLEVDEPNALHLWVTDNNRTFHLGPFSVDCAENKTFANTLLYSDDALHLLQAKGDHESTAVSLARLTEELNTI
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:06:45)
[INFO] Main: Simulation completed successfully. (00:06:47)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.7560 | |
| 2 | G | A | -0.1029 | |
| 3 | S | A | -0.6883 | |
| 4 | S | A | -1.1426 | |
| 5 | H | A | -2.0123 | |
| 6 | H | A | -2.3842 | |
| 7 | H | A | -2.6089 | |
| 8 | H | A | -2.6278 | |
| 9 | H | A | -2.4070 | |
| 10 | H | A | -2.1171 | |
| 11 | S | A | -1.6268 | |
| 12 | S | A | -1.7383 | |
| 13 | G | A | -1.7421 | |
| 14 | E | A | -2.3969 | |
| 15 | N | A | -1.5224 | |
| 16 | L | A | 0.3289 | |
| 17 | Y | A | 0.2376 | |
| 18 | K | A | -1.7903 | |
| 19 | Q | A | -1.4472 | |
| 20 | G | A | -0.8690 | |
| 21 | A | A | 0.2060 | |
| 22 | M | A | 0.8517 | |
| 23 | A | A | 0.3463 | |
| 24 | V | A | 0.5321 | |
| 25 | E | A | -2.0304 | |
| 26 | R | A | -3.4595 | |
| 27 | N | A | -2.9470 | |
| 28 | S | A | -1.9066 | |
| 29 | G | A | -1.7802 | |
| 30 | D | A | -2.0981 | |
| 31 | L | A | -0.0264 | |
| 32 | Q | A | -1.4819 | |
| 33 | L | A | -0.0196 | |
| 34 | P | A | -0.7006 | |
| 35 | Q | A | -1.2824 | |
| 36 | E | A | -0.9226 | |
| 37 | I | A | 0.0000 | |
| 38 | A | A | -0.0607 | |
| 39 | M | A | 0.0000 | |
| 40 | L | A | 0.0000 | |
| 41 | V | A | -0.5349 | |
| 42 | P | A | 0.0000 | |
| 43 | N | A | -2.2541 | |
| 44 | K | A | -2.5131 | |
| 45 | T | A | -1.5545 | |
| 46 | Q | A | -2.0307 | |
| 47 | V | A | 0.0000 | |
| 48 | V | A | -1.6590 | |
| 49 | P | A | -2.0235 | |
| 50 | K | A | -2.1011 | |
| 51 | S | A | -1.6019 | |
| 52 | G | A | -1.6779 | |
| 53 | G | A | -2.1022 | |
| 54 | E | A | -2.7670 | |
| 55 | G | A | -2.4006 | |
| 56 | K | A | -2.4785 | |
| 57 | V | A | -1.2514 | |
| 58 | K | A | 0.0000 | |
| 59 | D | A | -1.5121 | |
| 60 | I | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | A | A | -0.0587 | |
| 63 | S | A | 0.0080 | |
| 64 | P | A | 0.0000 | |
| 65 | A | A | 0.0000 | |
| 66 | L | A | 0.0000 | |
| 67 | V | A | 0.0000 | |
| 68 | R | A | -0.9129 | |
| 69 | A | A | 0.0000 | |
| 70 | G | A | -1.5530 | |
| 71 | G | A | -1.5358 | |
| 72 | V | A | 0.0000 | |
| 73 | M | A | 0.0000 | |
| 74 | I | A | 0.0000 | |
| 75 | A | A | 0.0000 | |
| 76 | F | A | 0.0000 | |
| 77 | V | A | 0.0000 | |
| 78 | E | A | 0.0000 | |
| 79 | G | A | 0.0000 | |
| 80 | R | A | -0.7324 | |
| 81 | T | A | -1.2532 | |
| 82 | K | A | -1.6911 | |
| 83 | N | A | -1.7475 | |
| 84 | K | A | -1.7908 | |
| 85 | L | A | -0.5589 | |
| 86 | F | A | 0.0000 | |
| 87 | P | A | -1.2028 | |
| 88 | E | A | -1.4726 | |
| 89 | V | A | 0.2933 | |
| 90 | I | A | 0.6588 | |
| 91 | D | A | -1.5756 | |
| 92 | L | A | 0.0000 | |
| 93 | S | A | 0.0000 | |
| 94 | S | A | 0.0000 | |
| 95 | S | A | 0.0000 | |
| 96 | D | A | -0.7146 | |
| 97 | I | A | 0.0000 | |
| 98 | V | A | 0.0000 | |
| 99 | A | A | 0.0000 | |
| 100 | G | A | 0.0000 | |
| 101 | Y | A | 0.0000 | |
| 102 | I | A | 0.0000 | |
| 103 | K | A | -1.3720 | |
| 104 | A | A | -1.1663 | |
| 105 | P | A | 0.0000 | |
| 106 | E | A | -2.4416 | |
| 107 | T | A | -1.2598 | |
| 108 | W | A | -1.0336 | |
| 109 | Q | A | -1.2915 | |
| 110 | S | A | -1.0424 | |
| 111 | L | A | 0.0000 | |
| 112 | V | A | -0.2056 | |
| 113 | A | A | -0.2855 | |
| 114 | E | A | 0.0000 | |
| 115 | V | A | 0.0000 | |
| 116 | T | A | -0.6219 | |
| 117 | K | A | -1.1738 | |
| 118 | E | A | -1.5691 | |
| 119 | Y | A | -0.0204 | |
| 120 | W | A | -0.4337 | |
| 121 | Q | A | -0.7162 | |
| 122 | A | A | 0.0000 | |
| 123 | H | A | 0.0000 | |
| 124 | T | A | 0.0000 | |
| 125 | V | A | 0.0000 | |
| 126 | L | A | 0.0000 | |
| 127 | E | A | -1.5099 | |
| 128 | S | A | -1.2312 | |
| 129 | A | A | -1.4731 | |
| 130 | N | A | -2.6224 | |
| 131 | N | A | -2.8469 | |
| 132 | S | A | -2.3886 | |
| 133 | N | A | -2.2735 | |
| 134 | H | A | -2.2634 | |
| 135 | R | A | -3.4338 | |
| 136 | V | A | 0.0000 | |
| 137 | G | A | 0.0000 | |
| 138 | V | A | 0.0000 | |
| 139 | A | A | 0.0000 | |
| 140 | R | A | -0.4190 | |
| 141 | L | A | -0.0205 | |
| 142 | P | A | 0.0000 | |
| 143 | T | A | 0.0000 | |
| 144 | G | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | T | A | -0.8515 | |
| 147 | R | A | -1.5132 | |
| 148 | G | A | -1.4885 | |
| 149 | N | A | -1.8751 | |
| 150 | K | A | -2.2815 | |
| 151 | V | A | 0.0000 | |
| 152 | F | A | 0.0000 | |
| 153 | L | A | 0.0000 | |
| 154 | L | A | 0.0000 | |
| 155 | V | A | 0.0000 | |
| 156 | G | A | 0.0000 | |
| 157 | S | A | -0.8804 | |
| 158 | Y | A | -1.2909 | |
| 159 | E | A | -2.6763 | |
| 160 | E | A | -2.5818 | |
| 161 | R | A | -2.6444 | |
| 162 | R | A | -1.4613 | |
| 163 | E | A | -1.0024 | |
| 164 | I | A | 0.6035 | |
| 165 | D | A | -1.4230 | |
| 166 | D | A | -1.3269 | |
| 167 | Y | A | 0.7451 | |
| 168 | I | A | 0.4867 | |
| 169 | W | A | -0.7139 | |
| 170 | K | A | -2.0371 | |
| 171 | A | A | -1.9790 | |
| 172 | E | A | -2.6618 | |
| 173 | A | A | -1.5633 | |
| 174 | W | A | -1.2041 | |
| 175 | N | A | -1.7317 | |
| 176 | I | A | 0.0000 | |
| 177 | K | A | -1.3020 | |
| 178 | V | A | 0.0000 | |
| 179 | I | A | 0.0000 | |
| 180 | E | A | -1.5399 | |
| 181 | G | A | 0.0000 | |
| 182 | E | A | -2.4795 | |
| 183 | A | A | 0.0000 | |
| 184 | T | A | -1.7710 | |
| 185 | Q | A | -1.8300 | |
| 186 | S | A | -1.3030 | |
| 187 | T | A | -1.0280 | |
| 188 | E | A | -1.6448 | |
| 189 | V | A | 0.2805 | |
| 190 | Q | A | -1.1150 | |
| 191 | P | A | -1.2717 | |
| 192 | T | A | -0.6646 | |
| 193 | Q | A | -0.9952 | |
| 194 | P | A | 0.0000 | |
| 195 | I | A | 0.0000 | |
| 196 | N | A | -1.8650 | |
| 197 | W | A | -1.6314 | |
| 198 | S | A | -1.7313 | |
| 199 | E | A | -2.3234 | |
| 200 | P | A | -1.8554 | |
| 201 | K | A | -2.3399 | |
| 202 | P | A | -1.5134 | |
| 203 | L | A | 0.0000 | |
| 204 | F | A | -1.6973 | |
| 205 | Q | A | -2.2300 | |
| 206 | T | A | -1.5880 | |
| 207 | D | A | -2.4161 | |
| 208 | S | A | -2.0865 | |
| 209 | P | A | -2.1372 | |
| 210 | N | A | -2.8066 | |
| 211 | N | A | -2.7720 | |
| 212 | K | A | -3.0489 | |
| 213 | G | A | -2.8264 | |
| 214 | D | A | -3.6414 | |
| 215 | L | A | -2.5718 | |
| 216 | K | A | -2.7916 | |
| 217 | E | A | -1.7483 | |
| 218 | F | A | 0.0000 | |
| 219 | L | A | 0.0000 | |
| 220 | G | A | 0.0000 | |
| 221 | G | A | 0.0000 | |
| 222 | G | A | 0.0000 | |
| 223 | G | A | 0.0000 | |
| 224 | S | A | 0.1283 | |
| 225 | G | A | 0.0000 | |
| 226 | I | A | 0.4044 | |
| 227 | V | A | 0.2766 | |
| 228 | M | A | 0.0000 | |
| 229 | G | A | -1.5996 | |
| 230 | N | A | -1.7619 | |
| 231 | G | A | -1.1115 | |
| 232 | T | A | 0.0000 | |
| 233 | L | A | 0.0000 | |
| 234 | V | A | 0.0000 | |
| 235 | F | A | 0.0000 | |
| 236 | P | A | 0.0000 | |
| 237 | L | A | 0.0000 | |
| 238 | T | A | 0.0000 | |
| 239 | A | A | 0.0000 | |
| 240 | K | A | -1.8606 | |
| 241 | D | A | 0.0000 | |
| 242 | E | A | -3.4337 | |
| 243 | S | A | -2.4439 | |
| 244 | N | A | -2.8344 | |
| 245 | K | A | -1.9192 | |
| 246 | V | A | 0.0000 | |
| 247 | F | A | -0.1594 | |
| 248 | S | A | 0.0000 | |
| 249 | L | A | 0.0000 | |
| 250 | I | A | 0.0000 | |
| 251 | T | A | 0.0000 | |
| 252 | Y | A | -0.6635 | |
| 253 | S | A | 0.0000 | |
| 254 | T | A | -1.6122 | |
| 255 | D | A | -2.0177 | |
| 256 | D | A | -2.7508 | |
| 257 | G | A | 0.0000 | |
| 258 | Q | A | -2.6587 | |
| 259 | K | A | -3.1218 | |
| 260 | W | A | 0.0000 | |
| 261 | E | A | -1.8887 | |
| 262 | I | A | -1.1596 | |
| 263 | P | A | 0.0000 | |
| 264 | G | A | -1.6316 | |
| 265 | G | A | 0.0000 | |
| 266 | V | A | 0.4672 | |
| 267 | S | A | 0.0000 | |
| 268 | S | A | -0.1021 | |
| 269 | V | A | 0.4557 | |
| 270 | A | A | -0.9522 | |
| 271 | C | A | 0.0000 | |
| 272 | R | A | -1.9010 | |
| 273 | S | A | -0.9316 | |
| 274 | P | A | 0.0000 | |
| 275 | R | A | -0.3698 | |
| 276 | V | A | 0.0000 | |
| 277 | T | A | 0.0000 | |
| 278 | E | A | -0.9167 | |
| 279 | W | A | -1.4469 | |
| 280 | E | A | -2.9284 | |
| 281 | E | A | -3.2462 | |
| 282 | G | A | -2.4335 | |
| 283 | T | A | 0.0000 | |
| 284 | L | A | 0.0000 | |
| 285 | L | A | 0.0000 | |
| 286 | M | A | 0.0000 | |
| 287 | V | A | 0.0000 | |
| 288 | T | A | 0.0000 | |
| 289 | Y | A | -1.4384 | |
| 290 | C | A | 0.0000 | |
| 291 | E | A | -3.2553 | |
| 292 | D | A | -3.1565 | |
| 293 | G | A | 0.0000 | |
| 294 | R | A | 0.0000 | |
| 295 | K | A | -0.8377 | |
| 296 | V | A | 0.0000 | |
| 297 | F | A | 0.0000 | |
| 298 | E | A | -0.9881 | |
| 299 | S | A | 0.0000 | |
| 300 | R | A | -2.9446 | |
| 301 | D | A | -2.0512 | |
| 302 | M | A | -1.1720 | |
| 303 | G | A | 0.0000 | |
| 304 | K | A | -2.0691 | |
| 305 | T | A | -1.2842 | |
| 306 | W | A | -0.9773 | |
| 307 | T | A | -0.7050 | |
| 308 | E | A | -0.9916 | |
| 309 | A | A | 0.0000 | |
| 310 | F | A | 1.2614 | |
| 311 | G | A | 0.0999 | |
| 312 | T | A | -0.2340 | |
| 313 | L | A | 0.0000 | |
| 314 | P | A | -0.3665 | |
| 315 | G | A | 0.0386 | |
| 316 | V | A | 0.0000 | |
| 317 | W | A | 0.1286 | |
| 318 | L | A | -0.7042 | |
| 319 | K | A | -2.2468 | |
| 320 | S | A | -2.3079 | |
| 321 | G | A | -1.7139 | |
| 322 | P | A | -1.3575 | |
| 323 | E | A | -1.9373 | |
| 324 | L | A | -1.2313 | |
| 325 | P | A | -1.1077 | |
| 326 | E | A | -1.7999 | |
| 327 | V | A | 0.1320 | |
| 328 | S | A | 0.0000 | |
| 329 | L | A | 0.0000 | |
| 330 | R | A | -0.6200 | |
| 331 | V | A | 0.0000 | |
| 332 | D | A | 0.0000 | |
| 333 | A | A | 0.0000 | |
| 334 | L | A | 0.0000 | |
| 335 | I | A | 0.2787 | |
| 336 | T | A | -0.0595 | |
| 337 | A | A | 0.0000 | |
| 338 | T | A | -1.7554 | |
| 339 | I | A | -2.0122 | |
| 340 | E | A | -2.7906 | |
| 341 | G | A | -2.4145 | |
| 342 | R | A | -3.0631 | |
| 343 | K | A | -2.4037 | |
| 344 | V | A | 0.0000 | |
| 345 | M | A | 0.0000 | |
| 346 | L | A | 0.0000 | |
| 347 | Y | A | 0.0000 | |
| 348 | T | A | 0.0000 | |
| 349 | Q | A | 0.0000 | |
| 350 | K | A | 0.0000 | |
| 351 | V | A | -0.6654 | |
| 352 | R | A | -1.8302 | |
| 353 | H | A | -2.3205 | |
| 354 | K | A | -2.3954 | |
| 355 | L | A | -0.6645 | |
| 356 | E | A | -1.9532 | |
| 357 | V | A | -0.1816 | |
| 358 | D | A | -2.2476 | |
| 359 | E | A | -2.7204 | |
| 360 | P | A | -1.5950 | |
| 361 | N | A | -1.2447 | |
| 362 | A | A | 0.0000 | |
| 363 | L | A | 0.0000 | |
| 364 | H | A | 0.0000 | |
| 365 | L | A | 0.0000 | |
| 366 | W | A | 0.2265 | |
| 367 | V | A | 0.0000 | |
| 368 | T | A | 0.0000 | |
| 369 | D | A | -1.9097 | |
| 370 | N | A | -1.8828 | |
| 371 | N | A | -2.5554 | |
| 372 | R | A | -2.4938 | |
| 373 | T | A | -1.0313 | |
| 374 | F | A | 0.3898 | |
| 375 | H | A | 0.0688 | |
| 376 | L | A | -0.1727 | |
| 377 | G | A | -0.1862 | |
| 378 | P | A | 0.0881 | |
| 379 | F | A | 0.0000 | |
| 380 | S | A | 0.0000 | |
| 381 | V | A | 0.2631 | |
| 382 | D | A | 0.0000 | |
| 383 | C | A | -0.9686 | |
| 384 | A | A | -1.1446 | |
| 385 | E | A | -2.5615 | |
| 386 | N | A | -2.0855 | |
| 387 | K | A | -1.6611 | |
| 388 | T | A | 0.0000 | |
| 389 | F | A | -0.0698 | |
| 390 | A | A | 0.1196 | |
| 391 | N | A | 0.0000 | |
| 392 | T | A | 0.0000 | |
| 393 | L | A | 0.0000 | |
| 394 | L | A | 0.0752 | |
| 395 | Y | A | -0.4404 | |
| 396 | S | A | -1.3529 | |
| 397 | D | A | -2.9372 | |
| 398 | D | A | -2.7811 | |
| 399 | A | A | 0.0000 | |
| 400 | L | A | 0.0000 | |
| 401 | H | A | 0.0000 | |
| 402 | L | A | 0.0000 | |
| 403 | L | A | 0.0000 | |
| 404 | Q | A | 0.0000 | |
| 405 | A | A | 0.0000 | |
| 406 | K | A | -1.1259 | |
| 407 | G | A | 0.0000 | |
| 408 | D | A | -2.7257 | |
| 409 | H | A | -2.7553 | |
| 410 | E | A | -3.0006 | |
| 411 | S | A | -2.1293 | |
| 412 | T | A | 0.0000 | |
| 413 | A | A | -0.3507 | |
| 414 | V | A | 0.0000 | |
| 415 | S | A | 0.0000 | |
| 416 | L | A | 0.0000 | |
| 417 | A | A | 0.0000 | |
| 418 | R | A | -0.9812 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.5702 | |
| 421 | E | A | -2.4135 | |
| 422 | E | A | -1.4426 | |
| 423 | L | A | -1.1849 | |
| 424 | N | A | -1.7550 | |
| 425 | T | A | -0.8939 | |
| 426 | I | A | -0.2662 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine