| Chain sequence(s) |
H: QVQLQESGPGLVKPSQTLSLTCTVSGGTISSGGHYWNWIRQHPGKGLEWIGYIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARGGYCSNGVCSPYGSGSHHFDYWGQGTLVTVSS
L: EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWPPTFGQGTKVEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:15)
[INFO] Main: Simulation completed successfully. (00:01:16)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -1.6397 | |
| 2 | V | H | -1.3046 | |
| 3 | Q | H | -1.8271 | |
| 4 | L | H | 0.0000 | |
| 5 | Q | H | -1.2371 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.5184 | |
| 8 | G | H | -0.4115 | |
| 9 | P | H | -0.2474 | |
| 11 | G | H | 0.1346 | |
| 12 | L | H | 0.2982 | |
| 13 | V | H | 0.0000 | |
| 14 | K | H | -1.3398 | |
| 15 | P | H | -1.1419 | |
| 16 | S | H | -1.1245 | |
| 17 | Q | H | -1.5488 | |
| 18 | T | H | -1.2559 | |
| 19 | L | H | 0.0000 | |
| 20 | S | H | -1.0188 | |
| 21 | L | H | 0.0000 | |
| 22 | T | H | -0.5578 | |
| 23 | C | H | 0.0000 | |
| 24 | T | H | -1.0400 | |
| 25 | V | H | 0.0000 | |
| 26 | S | H | -1.4131 | |
| 27 | G | H | -1.3828 | |
| 28 | G | H | -1.0889 | |
| 29 | T | H | -0.7452 | |
| 30 | I | H | 0.0000 | |
| 31 | S | H | -0.2466 | |
| 34 | S | H | -0.0983 | |
| 35 | G | H | 0.0841 | |
| 36 | G | H | 0.3001 | |
| 37 | H | H | 0.2289 | |
| 38 | Y | H | 0.3948 | |
| 39 | W | H | 0.0000 | |
| 40 | N | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | I | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.8403 | |
| 45 | H | H | -1.0190 | |
| 46 | P | H | -0.9675 | |
| 47 | G | H | -1.5014 | |
| 48 | K | H | -2.4614 | |
| 49 | G | H | -1.6237 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -1.1980 | |
| 52 | W | H | 0.0000 | |
| 53 | I | H | 0.0000 | |
| 54 | G | H | 0.0000 | |
| 55 | Y | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | Y | H | 0.3886 | |
| 58 | Y | H | 0.2008 | |
| 59 | S | H | -0.1208 | |
| 63 | G | H | -0.3010 | |
| 64 | S | H | 0.0164 | |
| 65 | T | H | 0.3945 | |
| 66 | Y | H | 0.7515 | |
| 67 | Y | H | -0.0784 | |
| 68 | N | H | -0.6964 | |
| 69 | P | H | -0.8631 | |
| 70 | S | H | -0.8259 | |
| 71 | L | H | 0.0000 | |
| 72 | K | H | -1.8681 | |
| 74 | S | H | -1.2675 | |
| 75 | R | H | -1.3401 | |
| 76 | V | H | 0.0000 | |
| 77 | T | H | -0.9064 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.3986 | |
| 80 | V | H | -0.3631 | |
| 81 | D | H | -1.2397 | |
| 82 | T | H | -1.0672 | |
| 83 | S | H | -1.3496 | |
| 84 | K | H | -2.2057 | |
| 85 | N | H | -1.4700 | |
| 86 | Q | H | -1.2664 | |
| 87 | F | H | 0.0000 | |
| 88 | S | H | -0.5903 | |
| 89 | L | H | 0.0000 | |
| 90 | K | H | -1.6574 | |
| 91 | L | H | 0.0000 | |
| 92 | S | H | -1.0448 | |
| 93 | S | H | -0.8780 | |
| 94 | V | H | 0.0000 | |
| 95 | T | H | -0.4406 | |
| 96 | A | H | -0.1599 | |
| 97 | A | H | -0.0104 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | 0.1619 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | 0.4582 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | R | H | -0.2747 | |
| 107 | G | H | 0.0000 | |
| 108 | G | H | 0.0000 | |
| 109 | Y | H | 0.4383 | |
| 110 | C | H | 0.7517 | |
| 111 | S | H | 0.0044 | |
| 111A | N | H | -0.8395 | |
| 111B | G | H | 0.0389 | |
| 111C | V | H | 1.6732 | |
| 111D | C | H | 1.3344 | |
| 111E | S | H | 0.9451 | |
| 112E | P | H | 0.5831 | |
| 112D | Y | H | 1.2831 | |
| 112C | G | H | 0.1004 | |
| 112B | S | H | 0.3545 | |
| 112A | G | H | -0.1161 | |
| 112 | S | H | 0.0000 | |
| 113 | H | H | 0.0000 | |
| 114 | H | H | -0.0560 | |
| 115 | F | H | 0.0000 | |
| 116 | D | H | -0.3985 | |
| 117 | Y | H | -0.5236 | |
| 118 | W | H | -0.5900 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.6489 | |
| 121 | G | H | -0.7539 | |
| 122 | T | H | -0.0209 | |
| 123 | L | H | 0.8071 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | 0.2012 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.4640 | |
| 128 | S | H | -0.5740 | |
| 1 | E | L | -1.5472 | |
| 2 | I | L | 0.0000 | |
| 3 | V | L | 0.7485 | |
| 4 | L | L | 0.0000 | |
| 5 | T | L | -0.5749 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -0.7261 | |
| 8 | P | L | -0.2831 | |
| 9 | A | L | -0.3225 | |
| 10 | T | L | -0.3854 | |
| 11 | L | L | -0.3620 | |
| 12 | S | L | -0.6672 | |
| 13 | L | L | -0.8854 | |
| 14 | S | L | -1.3831 | |
| 15 | P | L | -1.3952 | |
| 16 | G | L | -1.5369 | |
| 17 | E | L | -2.0775 | |
| 18 | R | L | -2.3650 | |
| 19 | A | L | 0.0000 | |
| 20 | T | L | -0.6469 | |
| 21 | L | L | 0.0000 | |
| 22 | S | L | -0.8206 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -2.2015 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -0.7849 | |
| 27 | Q | L | -1.2645 | |
| 28 | S | L | -1.1848 | |
| 29 | V | L | 0.0000 | |
| 36 | S | L | -0.4830 | |
| 37 | S | L | -0.2529 | |
| 38 | Y | L | 0.1676 | |
| 39 | L | L | 0.0000 | |
| 40 | A | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | -0.6792 | |
| 45 | K | L | -0.9385 | |
| 46 | P | L | -0.7891 | |
| 47 | G | L | -1.4006 | |
| 48 | Q | L | -1.9975 | |
| 49 | A | L | -1.2356 | |
| 50 | P | L | 0.0000 | |
| 51 | R | L | -0.9298 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | -0.3209 | |
| 56 | D | L | -0.4385 | |
| 57 | A | L | 0.0000 | |
| 65 | S | L | -0.9351 | |
| 66 | N | L | -1.4530 | |
| 67 | R | L | -1.5929 | |
| 68 | A | L | -0.9548 | |
| 69 | T | L | -0.6639 | |
| 70 | G | L | -0.5927 | |
| 71 | I | L | -0.5022 | |
| 72 | P | L | -0.3358 | |
| 74 | A | L | -0.3159 | |
| 75 | R | L | -0.5699 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.6074 | |
| 78 | G | L | 0.0000 | |
| 79 | S | L | -0.7034 | |
| 80 | G | L | -0.9448 | |
| 83 | S | L | -0.9338 | |
| 84 | G | L | -1.0072 | |
| 85 | T | L | -1.5507 | |
| 86 | D | L | -1.8839 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -0.7000 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | -0.5836 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -1.2190 | |
| 93 | S | L | -1.5126 | |
| 94 | L | L | 0.0000 | |
| 95 | E | L | -1.5079 | |
| 96 | P | L | -1.2665 | |
| 97 | E | L | -1.3942 | |
| 98 | D | L | 0.0000 | |
| 99 | F | L | 0.1176 | |
| 100 | A | L | 0.0000 | |
| 101 | V | L | -0.0065 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | R | L | 0.0000 | |
| 108 | S | L | -0.4558 | |
| 109 | N | L | -1.0970 | |
| 114 | W | L | -0.0673 | |
| 115 | P | L | 0.0000 | |
| 116 | P | L | 0.0000 | |
| 117 | T | L | -0.1903 | |
| 118 | F | L | 0.0516 | |
| 119 | G | L | 0.0000 | |
| 120 | Q | L | -1.1906 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -0.4778 | |
| 124 | V | L | 0.0000 | |
| 125 | E | L | -0.7471 | |
| 126 | I | L | -0.7541 | |
| 127 | K | L | -1.6753 |