| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIVVNGKVLVPKVSGWQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTIGHPLFNKLGDTENPTAPVHEGADDRVAFSFDPKQTQLFIVGCEPPTGEHWDIAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYRRSGPEGHPLPDAPPPSPLYTPPPASSPYAVRPSTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLSTPAENVYDASNFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:02)
[INFO] Main: Simulation completed successfully. (00:00:07)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9486 | |
| 2 | L | A | 1.9750 | |
| 3 | P | A | 0.6583 | |
| 4 | P | A | 0.3289 | |
| 5 | T | A | 0.0932 | |
| 6 | T | A | 0.1203 | |
| 7 | P | A | 0.1459 | |
| 8 | V | A | 1.2077 | |
| 9 | A | A | -0.0008 | |
| 10 | K | A | -1.1760 | |
| 11 | V | A | -0.4542 | |
| 12 | Q | A | -1.5679 | |
| 13 | S | A | -1.6209 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4037 | |
| 16 | E | A | -2.4353 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4601 | |
| 20 | P | A | 0.1079 | |
| 21 | T | A | 0.1153 | |
| 22 | S | A | -0.1701 | |
| 23 | L | A | 0.0000 | |
| 24 | F | A | -0.0951 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.2872 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.8870 | |
| 31 | R | A | -2.6963 | |
| 32 | L | A | -0.8563 | |
| 33 | L | A | 0.9869 | |
| 34 | T | A | 1.2240 | |
| 35 | V | A | 1.6724 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.3070 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6603 | |
| 40 | K | A | -1.8823 | |
| 41 | D | A | -0.7575 | |
| 42 | I | A | 1.2426 | |
| 43 | V | A | 2.2075 | |
| 44 | V | A | 1.6598 | |
| 45 | N | A | -0.5186 | |
| 46 | G | A | -0.3595 | |
| 47 | K | A | -0.1236 | |
| 48 | V | A | 2.2029 | |
| 49 | L | A | 2.5349 | |
| 50 | V | A | 1.4411 | |
| 51 | P | A | 0.3198 | |
| 52 | K | A | -0.7175 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | W | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1098 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4595 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.3041 | |
| 70 | K | A | -1.8163 | |
| 71 | F | A | -0.6724 | |
| 72 | A | A | -0.5822 | |
| 73 | L | A | -0.9411 | |
| 74 | P | A | -1.2649 | |
| 75 | Q | A | -2.4764 | |
| 76 | K | A | -3.0947 | |
| 77 | D | A | -2.9903 | |
| 78 | F | A | -1.6439 | |
| 79 | Y | A | -1.9151 | |
| 80 | D | A | -2.7557 | |
| 81 | P | A | -2.3529 | |
| 82 | E | A | -3.0699 | |
| 83 | K | A | -3.4406 | |
| 84 | E | A | -2.5037 | |
| 85 | R | A | -1.3152 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6290 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9591 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3346 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.7972 | |
| 99 | G | A | -0.6172 | |
| 100 | P | A | -0.4632 | |
| 101 | L | A | -0.0627 | |
| 102 | G | A | -0.4388 | |
| 103 | K | A | -1.0646 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.5363 | |
| 106 | I | A | 0.0000 | |
| 107 | G | A | 0.1459 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.4309 | |
| 110 | L | A | 0.3318 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.1644 | |
| 113 | K | A | -0.5335 | |
| 114 | L | A | 0.0000 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.3997 | |
| 117 | T | A | -1.2150 | |
| 118 | E | A | -2.6881 | |
| 119 | N | A | -2.4083 | |
| 120 | P | A | -1.5042 | |
| 121 | T | A | -0.7295 | |
| 122 | A | A | -0.2834 | |
| 123 | P | A | -0.0111 | |
| 124 | V | A | -0.1633 | |
| 125 | H | A | -1.2373 | |
| 126 | E | A | -2.2620 | |
| 127 | G | A | -2.1082 | |
| 128 | A | A | -1.5649 | |
| 129 | D | A | -2.4676 | |
| 130 | D | A | -2.0929 | |
| 131 | R | A | -1.1556 | |
| 132 | V | A | 0.2319 | |
| 133 | A | A | 0.4453 | |
| 134 | F | A | 0.2725 | |
| 135 | S | A | -0.0785 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.7611 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5050 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2472 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1221 | |
| 157 | D | A | 0.2964 | |
| 158 | I | A | 0.8390 | |
| 159 | A | A | 0.1124 | |
| 160 | E | A | -1.4801 | |
| 161 | P | A | -0.2381 | |
| 162 | C | A | 0.1848 | |
| 163 | P | A | -0.1660 | |
| 164 | G | A | -0.0617 | |
| 165 | L | A | 0.6156 | |
| 166 | P | A | -0.0959 | |
| 167 | P | A | -0.3327 | |
| 168 | G | A | -0.4162 | |
| 169 | A | A | -0.0127 | |
| 170 | C | A | 0.7561 | |
| 171 | P | A | 0.5513 | |
| 172 | P | A | 0.7768 | |
| 173 | I | A | 2.0361 | |
| 174 | Q | A | 0.8472 | |
| 175 | L | A | 1.4467 | |
| 176 | V | A | 0.8194 | |
| 177 | N | A | -0.3495 | |
| 178 | S | A | 0.0116 | |
| 179 | V | A | 0.4234 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3766 | |
| 182 | D | A | 0.0793 | |
| 183 | G | A | -0.1587 | |
| 184 | D | A | -0.5743 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | -0.4755 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.0912 | |
| 190 | F | A | 0.0128 | |
| 191 | G | A | -0.1510 | |
| 192 | N | A | -0.3279 | |
| 193 | M | A | -0.1599 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.3926 | |
| 197 | E | A | -2.5951 | |
| 198 | L | A | -1.2016 | |
| 199 | Q | A | -2.5259 | |
| 200 | Q | A | -3.3315 | |
| 201 | D | A | -3.5996 | |
| 202 | R | A | -3.3392 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.2006 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3843 | |
| 211 | S | A | -1.9146 | |
| 212 | T | A | -1.4685 | |
| 213 | R | A | -2.1588 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.2214 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3176 | |
| 220 | L | A | 0.5075 | |
| 221 | K | A | -1.2947 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.8892 | |
| 224 | N | A | -1.6586 | |
| 225 | E | A | -1.3258 | |
| 226 | A | A | -0.6948 | |
| 227 | Y | A | -0.4252 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6809 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | 0.0974 | |
| 234 | F | A | 0.2814 | |
| 235 | G | A | -0.8013 | |
| 236 | R | A | -2.5882 | |
| 237 | R | A | -2.8351 | |
| 238 | E | A | -2.0983 | |
| 239 | Q | A | -0.0618 | |
| 240 | V | A | 1.5342 | |
| 241 | Y | A | 1.2561 | |
| 242 | A | A | 0.1641 | |
| 243 | R | A | -1.3199 | |
| 244 | H | A | -1.2105 | |
| 245 | F | A | -0.2534 | |
| 246 | Y | A | 0.0000 | |
| 247 | R | A | 0.0000 | |
| 248 | R | A | -0.8303 | |
| 249 | S | A | -1.5129 | |
| 250 | G | A | -1.2458 | |
| 251 | P | A | -1.1178 | |
| 252 | E | A | -1.3490 | |
| 253 | G | A | -1.2718 | |
| 254 | H | A | -1.4678 | |
| 255 | P | A | -1.3624 | |
| 256 | L | A | -0.4401 | |
| 257 | P | A | -0.8843 | |
| 258 | D | A | -1.9167 | |
| 259 | A | A | -0.8978 | |
| 260 | P | A | -0.9438 | |
| 261 | P | A | -0.6323 | |
| 262 | P | A | -0.3202 | |
| 263 | S | A | -0.1872 | |
| 264 | P | A | 0.4213 | |
| 265 | L | A | 1.4869 | |
| 266 | Y | A | 0.5960 | |
| 267 | T | A | -0.1319 | |
| 268 | P | A | -0.3495 | |
| 269 | P | A | 0.0852 | |
| 270 | P | A | -0.2378 | |
| 271 | A | A | 0.1749 | |
| 272 | S | A | 0.0061 | |
| 273 | S | A | 0.3236 | |
| 274 | P | A | 0.4432 | |
| 275 | Y | A | 1.2651 | |
| 276 | A | A | 1.0175 | |
| 277 | V | A | 1.4328 | |
| 278 | R | A | 0.3494 | |
| 279 | P | A | -0.2937 | |
| 280 | S | A | 0.0000 | |
| 281 | T | A | -0.4965 | |
| 282 | D | A | -0.8847 | |
| 283 | Y | A | 0.8438 | |
| 284 | F | A | 0.7011 | |
| 285 | G | A | 0.1188 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.7976 | |
| 291 | L | A | 1.5723 | |
| 292 | V | A | 0.5081 | |
| 293 | S | A | -0.1694 | |
| 294 | S | A | -0.9711 | |
| 295 | D | A | -1.8454 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1145 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6337 | |
| 301 | R | A | -1.8655 | |
| 302 | P | A | -0.9592 | |
| 303 | F | A | -0.1618 | |
| 304 | W | A | -0.5134 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0789 | |
| 307 | R | A | -2.8296 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.3916 | |
| 310 | G | A | -1.2314 | |
| 311 | N | A | -1.3271 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.8290 | |
| 319 | N | A | -0.8415 | |
| 320 | E | A | -1.0168 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.4945 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.2519 | |
| 333 | N | A | 0.4521 | |
| 334 | F | A | 1.6830 | |
| 335 | T | A | 0.8626 | |
| 336 | I | A | 0.4209 | |
| 337 | S | A | -1.0633 | |
| 338 | Q | A | -1.9419 | |
| 339 | Q | A | -1.6326 | |
| 340 | L | A | 0.1992 | |
| 341 | S | A | -0.0618 | |
| 342 | T | A | -0.4124 | |
| 343 | P | A | -0.4413 | |
| 344 | A | A | -0.6463 | |
| 345 | E | A | -1.7501 | |
| 346 | N | A | -1.0815 | |
| 347 | V | A | 1.0204 | |
| 348 | Y | A | 1.0818 | |
| 349 | D | A | -0.1637 | |
| 350 | A | A | -0.5018 | |
| 351 | S | A | -0.5374 | |
| 352 | N | A | -0.6937 | |
| 353 | F | A | -1.1413 | |
| 354 | K | A | -2.0374 | |
| 355 | N | A | -1.8274 | |
| 356 | Y | A | -0.1197 | |
| 357 | L | A | 0.6402 | |
| 358 | R | A | 0.8998 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.1248 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.2472 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -1.9598 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6622 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.3077 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3195 | |
| 376 | L | A | -1.7506 | |
| 377 | D | A | -2.0304 | |
| 378 | P | A | -1.0643 | |
| 379 | G | A | -1.0210 | |
| 380 | V | A | -0.9282 | |
| 381 | L | A | -0.5401 | |
| 382 | A | A | -0.6587 | |
| 383 | H | A | -0.8538 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.3955 | |
| 386 | T | A | -0.5717 | |
| 387 | M | A | -0.3361 | |
| 388 | N | A | -0.8633 | |
| 389 | P | A | -1.2711 | |
| 390 | T | A | -1.5322 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.5178 | |
| 393 | E | A | -2.9175 | |
| 394 | N | A | -2.6495 | |
| 395 | W | A | -1.5091 | |
| 396 | N | A | -1.1373 | |
| 397 | L | A | -0.1830 | |
| 398 | G | A | 0.5585 | |
| 399 | F | A | 2.4286 | |
| 400 | V | A | 1.8613 | |
| 401 | P | A | 0.0618 | |
| 402 | P | A | -1.9254 | |
| 403 | K | A | -3.4438 | |
| 404 | E | A | -3.9339 | |
| 405 | R | A | -4.2882 | |
| 406 | E | A | -3.9480 | |
| 407 | D | A | -2.9484 | |
| 408 | P | A | -1.8100 | |
| 409 | Y | A | -0.9931 | |
| 410 | K | A | -2.1111 | |
| 411 | G | A | -0.6409 | |
| 412 | L | A | 0.6611 | |
| 413 | I | A | 1.5828 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3860 | |
| 416 | E | A | -1.6473 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9331 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0768 | |
| 421 | E | A | -2.8119 | |
| 422 | R | A | -2.6973 | |
| 423 | F | A | -1.3245 | |
| 424 | S | A | -1.4713 | |
| 425 | Q | A | -1.8623 | |
| 426 | D | A | -2.8822 | |
| 427 | L | A | -1.9769 | |
| 428 | D | A | -2.7620 | |
| 429 | Q | A | -2.6065 | |
| 430 | F | A | -1.4282 | |
| 431 | A | A | -0.8902 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.5646 | |
| 435 | K | A | -0.7103 | |
| 436 | F | A | 0.1705 | |
| 437 | L | A | 1.0402 | |
| 438 | Y | A | 0.8320 | |
| 439 | Q | A | -0.2634 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine