| Chain sequence(s) |
A: EAEAEFTDACVLPAVQGPCRGWEPRWAYSPLLQQCHPFVYGGCEGNGNNFHSRESCEDACPVVDHHHHHH
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:50)
[INFO] Main: Simulation completed successfully. (00:00:52)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | A | -2.4459 | |
| 2 | A | A | -2.1055 | |
| 3 | E | A | -2.7209 | |
| 4 | A | A | -0.7870 | |
| 5 | E | A | -0.6151 | |
| 6 | F | A | 1.4394 | |
| 7 | T | A | 0.9666 | |
| 8 | D | A | 0.0000 | |
| 9 | A | A | 0.4737 | |
| 10 | C | A | 0.0000 | |
| 11 | V | A | 2.1353 | |
| 12 | L | A | 0.6919 | |
| 13 | P | A | 0.2140 | |
| 14 | A | A | 0.0107 | |
| 15 | V | A | -0.5130 | |
| 16 | Q | A | -1.1130 | |
| 17 | G | A | -1.3555 | |
| 18 | P | A | -1.1539 | |
| 19 | C | A | -1.1786 | |
| 20 | R | A | -1.9285 | |
| 21 | G | A | -0.9412 | |
| 22 | W | A | 0.2295 | |
| 23 | E | A | -0.5435 | |
| 24 | P | A | -0.2800 | |
| 25 | R | A | -0.5461 | |
| 26 | W | A | -0.5879 | |
| 27 | A | A | 0.0000 | |
| 28 | Y | A | 0.0000 | |
| 29 | S | A | 0.0000 | |
| 30 | P | A | 0.7968 | |
| 31 | L | A | 1.8724 | |
| 32 | L | A | 1.3693 | |
| 33 | Q | A | -0.4078 | |
| 34 | Q | A | -0.6372 | |
| 35 | C | A | 0.0000 | |
| 36 | H | A | -0.4984 | |
| 37 | P | A | -0.2769 | |
| 38 | F | A | 0.5189 | |
| 39 | V | A | 1.0450 | |
| 40 | Y | A | -0.2347 | |
| 41 | G | A | 0.0000 | |
| 42 | G | A | -1.1582 | |
| 43 | C | A | -1.3243 | |
| 44 | E | A | -2.2593 | |
| 45 | G | A | -1.9037 | |
| 46 | N | A | -1.9439 | |
| 47 | G | A | -1.0353 | |
| 48 | N | A | 0.0000 | |
| 49 | N | A | -0.7620 | |
| 50 | F | A | -1.1723 | |
| 51 | H | A | -1.4379 | |
| 52 | S | A | -1.6074 | |
| 53 | R | A | -2.2068 | |
| 54 | E | A | -2.9771 | |
| 55 | S | A | -2.1736 | |
| 56 | C | A | 0.0000 | |
| 57 | E | A | -2.3573 | |
| 58 | D | A | -2.1531 | |
| 59 | A | A | -1.1197 | |
| 60 | C | A | 0.0000 | |
| 61 | P | A | -0.4466 | |
| 62 | V | A | 1.0454 | |
| 63 | V | A | 1.0021 | |
| 64 | D | A | -1.3192 | |
| 65 | H | A | 0.0000 | |
| 66 | H | A | -2.6122 | |
| 67 | H | A | -1.8386 | |
| 68 | H | A | -1.9079 | |
| 69 | H | A | -2.1358 | |
| 70 | H | A | -1.7178 |