| Chain sequence(s) |
A: GPQIVLSCMKQP
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:04)
[INFO] Main: Simulation completed successfully. (00:00:05)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.1585 | |
| 2 | P | A | 0.4710 | |
| 3 | Q | A | 0.7396 | |
| 4 | I | A | 2.6391 | |
| 5 | V | A | 3.1677 | |
| 6 | L | A | 2.6081 | |
| 7 | S | A | 1.5922 | |
| 8 | C | A | 1.3021 | |
| 9 | M | A | 0.3333 | |
| 10 | K | A | -1.9291 | |
| 11 | Q | A | -1.6593 | |
| 12 | P | A | -1.1903 |