| Chain sequence(s) |
A: GGGHKGF
C: GGGHKGF B: GGGHKGF E: GGGHKGF D: GGGHKGF G: GGGHKGF F: GGGHKGF I: GGGHKGF H: GGGHKGF K: GGGHKGF J: GGGHKGF M: GGGHKGF L: GGGHKGF O: GGGHKGF N: GGGHKGF Q: GGGHKGF P: GGGHKGF S: GGGHKGF R: GGGHKGF T: GGGHKGF input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,K,J,M,L,O,N,Q,P,S,R,T |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:07:10)
[INFO] Main: Simulation completed successfully. (00:07:15)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.9359 | |
| 2 | G | A | -1.2212 | |
| 3 | G | A | -1.7204 | |
| 4 | H | A | 0.0000 | |
| 5 | K | A | -1.6804 | |
| 6 | G | A | 0.0000 | |
| 7 | F | A | 2.1500 | |
| 1 | G | B | 0.8772 | |
| 2 | G | B | 0.0000 | |
| 3 | G | B | -1.3265 | |
| 4 | H | B | -1.5880 | |
| 5 | K | B | -1.8684 | |
| 6 | G | B | -0.2608 | |
| 7 | F | B | 0.9871 | |
| 1 | G | C | -1.2160 | |
| 2 | G | C | -1.5111 | |
| 3 | G | C | -2.2679 | |
| 4 | H | C | -2.7315 | |
| 5 | K | C | -2.3012 | |
| 6 | G | C | -0.1468 | |
| 7 | F | C | 2.1853 | |
| 1 | G | D | -0.9942 | |
| 2 | G | D | -1.4643 | |
| 3 | G | D | -2.4421 | |
| 4 | H | D | -2.4927 | |
| 5 | K | D | -1.6104 | |
| 6 | G | D | 0.2951 | |
| 7 | F | D | 2.4491 | |
| 1 | G | E | -0.4775 | |
| 2 | G | E | -1.0105 | |
| 3 | G | E | -1.5289 | |
| 4 | H | E | -2.0023 | |
| 5 | K | E | -1.6583 | |
| 6 | G | E | 0.0000 | |
| 7 | F | E | 2.1822 | |
| 1 | G | F | -1.2218 | |
| 2 | G | F | -1.2402 | |
| 3 | G | F | -1.3931 | |
| 4 | H | F | -1.1601 | |
| 5 | K | F | -1.7406 | |
| 6 | G | F | 0.0000 | |
| 7 | F | F | 0.5662 | |
| 1 | G | G | -1.4067 | |
| 2 | G | G | -1.3754 | |
| 3 | G | G | -1.2895 | |
| 4 | H | G | 0.0000 | |
| 5 | K | G | -1.1441 | |
| 6 | G | G | 0.0000 | |
| 7 | F | G | 0.5815 | |
| 1 | G | H | -1.3254 | |
| 2 | G | H | -1.3339 | |
| 3 | G | H | -0.7172 | |
| 4 | H | H | 0.0000 | |
| 5 | K | H | 0.0000 | |
| 6 | G | H | 0.0000 | |
| 7 | F | H | 1.1406 | |
| 1 | G | I | -1.3235 | |
| 2 | G | I | -1.1693 | |
| 3 | G | I | 0.0000 | |
| 4 | H | I | -0.5495 | |
| 5 | K | I | -0.6185 | |
| 6 | G | I | -0.2069 | |
| 7 | F | I | 0.8172 | |
| 1 | G | J | -1.1720 | |
| 2 | G | J | -1.2536 | |
| 3 | G | J | -1.2390 | |
| 4 | H | J | -1.3964 | |
| 5 | K | J | 0.0000 | |
| 6 | G | J | -0.0175 | |
| 7 | F | J | 0.8916 | |
| 1 | G | K | -0.7721 | |
| 2 | G | K | -0.9525 | |
| 3 | G | K | -1.0043 | |
| 4 | H | K | -1.9490 | |
| 5 | K | K | -1.5721 | |
| 6 | G | K | -0.4299 | |
| 7 | F | K | 0.7690 | |
| 1 | G | L | -0.5752 | |
| 2 | G | L | -0.2943 | |
| 3 | G | L | -0.8602 | |
| 4 | H | L | -2.3937 | |
| 5 | K | L | -2.1593 | |
| 6 | G | L | -0.6948 | |
| 7 | F | L | 1.3176 | |
| 1 | G | M | -1.0281 | |
| 2 | G | M | -1.5826 | |
| 3 | G | M | -1.8515 | |
| 4 | H | M | -2.1661 | |
| 5 | K | M | -1.9003 | |
| 6 | G | M | -0.2117 | |
| 7 | F | M | 1.9473 | |
| 1 | G | N | 0.7699 | |
| 2 | G | N | -0.1740 | |
| 3 | G | N | 0.0000 | |
| 4 | H | N | -1.6421 | |
| 5 | K | N | 0.0000 | |
| 6 | G | N | -0.1052 | |
| 7 | F | N | 0.7403 | |
| 1 | G | O | -0.1509 | |
| 2 | G | O | -0.2144 | |
| 3 | G | O | -0.6716 | |
| 4 | H | O | -1.5235 | |
| 5 | K | O | -1.0413 | |
| 6 | G | O | 0.0120 | |
| 7 | F | O | 1.2953 | |
| 1 | G | P | 0.1575 | |
| 2 | G | P | -0.1739 | |
| 3 | G | P | -0.5899 | |
| 4 | H | P | -1.4514 | |
| 5 | K | P | -1.3156 | |
| 6 | G | P | -0.9061 | |
| 7 | F | P | -0.2797 | |
| 1 | G | Q | 0.0611 | |
| 2 | G | Q | -0.7398 | |
| 3 | G | Q | -1.6564 | |
| 4 | H | Q | -2.4946 | |
| 5 | K | Q | -1.4616 | |
| 6 | G | Q | -0.3361 | |
| 7 | F | Q | 1.5154 | |
| 1 | G | R | -0.3358 | |
| 2 | G | R | -0.9373 | |
| 3 | G | R | -1.4988 | |
| 4 | H | R | -2.4273 | |
| 5 | K | R | -1.8303 | |
| 6 | G | R | -0.3886 | |
| 7 | F | R | 1.1979 | |
| 1 | G | S | -0.4930 | |
| 2 | G | S | -0.7896 | |
| 3 | G | S | -1.5956 | |
| 4 | H | S | -2.3277 | |
| 5 | K | S | -1.8448 | |
| 6 | G | S | 0.0678 | |
| 7 | F | S | 1.8695 | |
| 1 | G | T | -0.4210 | |
| 2 | G | T | -0.6043 | |
| 3 | G | T | -0.7758 | |
| 4 | H | T | -2.0899 | |
| 5 | K | T | -2.0657 | |
| 6 | G | T | -0.6837 | |
| 7 | F | T | 0.9627 |