| Chain sequence(s) |
A: GKITLYEDRGFQGRHYECSSDHPNLQPYLSRCDSARVDSGCWMLYEQPNYSGLQYFLRRGDYADHQQWMGLSDSVRSCRLIPHSGSHRIRLYEREDYRGQMIEFTEDCSCLQDRFRFNEIHSLNVLEGSWVLYELSNYRGRQYLLMPGDYRRYQDWGATNARVGSLRRVIDFS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:10)
[INFO] Main: Simulation completed successfully. (00:02:11)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -2.2364 | |
| 2 | K | A | -3.2454 | |
| 3 | I | A | 0.0000 | |
| 4 | T | A | -1.7223 | |
| 5 | L | A | 0.0000 | |
| 6 | Y | A | -2.3071 | |
| 7 | E | A | -2.5833 | |
| 8 | D | A | -2.9986 | |
| 9 | R | A | -3.0710 | |
| 10 | G | A | -1.8189 | |
| 11 | F | A | -1.7174 | |
| 12 | Q | A | -2.6446 | |
| 13 | G | A | -2.7741 | |
| 14 | R | A | -2.9201 | |
| 15 | H | A | -2.4895 | |
| 16 | Y | A | -1.4028 | |
| 17 | E | A | -2.3833 | |
| 18 | C | A | 0.0000 | |
| 19 | S | A | -2.1255 | |
| 20 | S | A | -1.8400 | |
| 21 | D | A | -2.2029 | |
| 22 | H | A | -1.7333 | |
| 23 | P | A | -1.7355 | |
| 24 | N | A | -1.6749 | |
| 25 | L | A | 0.0000 | |
| 26 | Q | A | -1.6113 | |
| 27 | P | A | -0.6317 | |
| 28 | Y | A | -0.4497 | |
| 29 | L | A | 0.0000 | |
| 30 | S | A | -1.2852 | |
| 31 | R | A | -2.3469 | |
| 32 | C | A | 0.0000 | |
| 33 | D | A | -2.3891 | |
| 34 | S | A | 0.0000 | |
| 35 | A | A | 0.0000 | |
| 36 | R | A | -2.3928 | |
| 37 | V | A | 0.0000 | |
| 38 | D | A | -3.2304 | |
| 39 | S | A | -2.0411 | |
| 40 | G | A | 0.0000 | |
| 41 | C | A | 0.0000 | |
| 42 | W | A | 0.0000 | |
| 43 | M | A | 0.0000 | |
| 44 | L | A | 0.0000 | |
| 45 | Y | A | 0.0000 | |
| 46 | E | A | -1.3944 | |
| 47 | Q | A | -2.1417 | |
| 48 | P | A | -1.8059 | |
| 49 | N | A | -2.0130 | |
| 50 | Y | A | -1.2128 | |
| 51 | S | A | -1.0944 | |
| 52 | G | A | -1.0016 | |
| 53 | L | A | -0.3263 | |
| 54 | Q | A | -0.2379 | |
| 55 | Y | A | 0.0000 | |
| 56 | F | A | 0.0722 | |
| 57 | L | A | 0.0000 | |
| 58 | R | A | -1.3500 | |
| 59 | R | A | -2.1805 | |
| 60 | G | A | -1.9674 | |
| 61 | D | A | -2.7582 | |
| 62 | Y | A | -2.1412 | |
| 63 | A | A | -2.0248 | |
| 64 | D | A | -2.3808 | |
| 65 | H | A | -1.9051 | |
| 66 | Q | A | -1.8706 | |
| 67 | Q | A | -2.2069 | |
| 68 | W | A | 0.0000 | |
| 69 | M | A | -0.6392 | |
| 70 | G | A | -0.3296 | |
| 71 | L | A | 0.8288 | |
| 72 | S | A | -0.5837 | |
| 73 | D | A | -1.9167 | |
| 74 | S | A | -1.4483 | |
| 75 | V | A | 0.0000 | |
| 76 | R | A | -1.8891 | |
| 77 | S | A | 0.0000 | |
| 78 | C | A | 0.0000 | |
| 79 | R | A | -1.4090 | |
| 80 | L | A | -1.1680 | |
| 81 | I | A | 0.0000 | |
| 82 | P | A | -0.7449 | |
| 83 | H | A | -1.1846 | |
| 84 | S | A | -1.1489 | |
| 85 | G | A | -1.1695 | |
| 86 | S | A | -1.3853 | |
| 87 | H | A | 0.0000 | |
| 88 | R | A | -2.5225 | |
| 89 | I | A | 0.0000 | |
| 90 | R | A | -1.3514 | |
| 91 | L | A | 0.0000 | |
| 92 | Y | A | 0.0000 | |
| 93 | E | A | -1.9689 | |
| 94 | R | A | -2.7403 | |
| 95 | E | A | -2.8868 | |
| 96 | D | A | -3.6119 | |
| 97 | Y | A | -2.7719 | |
| 98 | R | A | -2.8888 | |
| 99 | G | A | -2.1291 | |
| 100 | Q | A | -1.5122 | |
| 101 | M | A | -0.8489 | |
| 102 | I | A | -0.7583 | |
| 103 | E | A | -1.0661 | |
| 104 | F | A | 0.0000 | |
| 105 | T | A | -1.6559 | |
| 106 | E | A | -1.6018 | |
| 107 | D | A | -1.5777 | |
| 108 | C | A | 0.0000 | |
| 109 | S | A | -1.4457 | |
| 110 | C | A | -1.2899 | |
| 111 | L | A | 0.0000 | |
| 112 | Q | A | -2.8604 | |
| 113 | D | A | -3.3242 | |
| 114 | R | A | -3.1992 | |
| 115 | F | A | 0.0000 | |
| 116 | R | A | -2.8696 | |
| 117 | F | A | -1.6678 | |
| 118 | N | A | -2.0205 | |
| 119 | E | A | -2.2290 | |
| 120 | I | A | 0.0000 | |
| 121 | H | A | -2.6933 | |
| 122 | S | A | 0.0000 | |
| 123 | L | A | 0.0000 | |
| 124 | N | A | -1.9493 | |
| 125 | V | A | 0.0000 | |
| 126 | L | A | -1.3251 | |
| 127 | E | A | -2.1473 | |
| 128 | G | A | 0.0000 | |
| 129 | S | A | 0.0000 | |
| 130 | W | A | 0.0000 | |
| 131 | V | A | 0.0000 | |
| 132 | L | A | 0.0000 | |
| 133 | Y | A | 0.0000 | |
| 134 | E | A | 0.0000 | |
| 135 | L | A | -0.7840 | |
| 136 | S | A | -1.0035 | |
| 137 | N | A | -1.5384 | |
| 138 | Y | A | -1.2204 | |
| 139 | R | A | -1.8183 | |
| 140 | G | A | -1.3130 | |
| 141 | R | A | -1.4515 | |
| 142 | Q | A | 0.0000 | |
| 143 | Y | A | -0.1397 | |
| 144 | L | A | 0.0000 | |
| 145 | L | A | 0.0000 | |
| 146 | M | A | -0.3886 | |
| 147 | P | A | -1.1424 | |
| 148 | G | A | -1.3272 | |
| 149 | D | A | -2.9495 | |
| 150 | Y | A | -3.0640 | |
| 151 | R | A | -4.2051 | |
| 152 | R | A | -3.9768 | |
| 153 | Y | A | -2.5293 | |
| 154 | Q | A | -2.9790 | |
| 155 | D | A | -3.4797 | |
| 156 | W | A | 0.0000 | |
| 157 | G | A | -1.7416 | |
| 158 | A | A | -1.4084 | |
| 159 | T | A | -0.8795 | |
| 160 | N | A | -1.3587 | |
| 161 | A | A | 0.0000 | |
| 162 | R | A | -1.6323 | |
| 163 | V | A | 0.0000 | |
| 164 | G | A | 0.0000 | |
| 165 | S | A | 0.0000 | |
| 166 | L | A | 0.0000 | |
| 167 | R | A | -1.2937 | |
| 168 | R | A | -1.2946 | |
| 169 | V | A | 0.0000 | |
| 170 | I | A | 0.4463 | |
| 171 | D | A | 0.0169 | |
| 172 | F | A | 1.0192 | |
| 173 | S | A | -0.0752 |