| Chain sequence(s) |
B: SFADELKASLEKVKALAEKMKAEGNEELAKALEQMAKKLAEILEKVEKTL
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:14)
[INFO] Main: Simulation completed successfully. (00:02:14)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | B | -0.4663 | |
| 2 | F | B | 0.3553 | |
| 3 | A | B | -1.2316 | |
| 4 | D | B | -2.6317 | |
| 5 | E | B | -2.5253 | |
| 6 | L | B | 0.0000 | |
| 7 | K | B | -2.6253 | |
| 8 | A | B | -2.4428 | |
| 9 | S | B | -2.3996 | |
| 10 | L | B | 0.0000 | |
| 11 | E | B | -3.3632 | |
| 12 | K | B | -3.1142 | |
| 13 | V | B | 0.0000 | |
| 14 | K | B | -3.3333 | |
| 15 | A | B | -2.7012 | |
| 16 | L | B | -1.9811 | |
| 17 | A | B | 0.0000 | |
| 18 | E | B | -4.1977 | |
| 19 | K | B | -3.3841 | |
| 20 | M | B | -3.4933 | |
| 21 | K | B | -4.4786 | |
| 22 | A | B | -3.0363 | |
| 23 | E | B | -3.4855 | |
| 24 | G | B | -3.1615 | |
| 25 | N | B | -3.6379 | |
| 26 | E | B | -4.3197 | |
| 27 | E | B | -3.4119 | |
| 28 | L | B | -2.5779 | |
| 29 | A | B | 0.0000 | |
| 30 | K | B | -3.7279 | |
| 31 | A | B | -2.0469 | |
| 32 | L | B | -2.5219 | |
| 33 | E | B | -3.7164 | |
| 34 | Q | B | -2.9202 | |
| 35 | M | B | -1.9493 | |
| 36 | A | B | 0.0000 | |
| 37 | K | B | -3.4351 | |
| 38 | K | B | -3.1905 | |
| 39 | L | B | -2.2165 | |
| 40 | A | B | -2.6000 | |
| 41 | E | B | -3.3669 | |
| 42 | I | B | -1.9928 | |
| 43 | L | B | -2.7314 | |
| 44 | E | B | -3.8524 | |
| 45 | K | B | -3.3964 | |
| 46 | V | B | -1.7954 | |
| 47 | E | B | -3.1671 | |
| 48 | K | B | -2.9928 | |
| 49 | T | B | -1.3645 | |
| 50 | L | B | 0.0528 |