| Chain sequence(s) |
A: MGSSHHHHHHSSGLVPRGSHMASMTGGQQMGRGSMVVKVGINGFGRIGRLAFRRIQNVEGVEVTRINDLTDPNMLAHLLKYDTTQGRFDGTVEVKEGGFEVNGQFVKVSAEREPANIDWATDGVEIVLEATGFFASKEKAEQHIHENGAKKVVILEHHHHHH
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:01)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.7722 | |
| 2 | G | A | -0.0913 | |
| 3 | S | A | -0.5531 | |
| 4 | S | A | -1.1366 | |
| 5 | H | A | -1.8473 | |
| 6 | H | A | -2.2584 | |
| 7 | H | A | -2.3975 | |
| 8 | H | A | -2.4147 | |
| 9 | H | A | -2.2328 | |
| 10 | H | A | -1.9037 | |
| 11 | S | A | -1.1545 | |
| 12 | S | A | -0.4647 | |
| 13 | G | A | 0.4030 | |
| 14 | L | A | 1.8694 | |
| 15 | V | A | 1.7820 | |
| 16 | P | A | -0.0376 | |
| 17 | R | A | -1.6285 | |
| 18 | G | A | -1.5688 | |
| 19 | S | A | -1.1687 | |
| 20 | H | A | -0.6514 | |
| 21 | M | A | 0.4929 | |
| 22 | A | A | 0.5364 | |
| 23 | S | A | 0.4893 | |
| 24 | M | A | 0.7459 | |
| 25 | T | A | -0.1540 | |
| 26 | G | A | -1.0926 | |
| 27 | G | A | -1.3857 | |
| 28 | Q | A | -1.9021 | |
| 29 | Q | A | -1.9756 | |
| 30 | M | A | -0.8568 | |
| 31 | G | A | -1.5346 | |
| 32 | R | A | -2.0381 | |
| 33 | G | A | -0.9879 | |
| 34 | S | A | -0.5598 | |
| 35 | M | A | 0.8713 | |
| 36 | V | A | 1.0613 | |
| 37 | V | A | 0.6780 | |
| 38 | K | A | -0.1658 | |
| 39 | V | A | 0.0000 | |
| 40 | G | A | 0.0000 | |
| 41 | I | A | 0.0000 | |
| 42 | N | A | 0.0000 | |
| 43 | G | A | 0.0000 | |
| 44 | F | A | 0.0000 | |
| 45 | G | A | -0.4549 | |
| 46 | R | A | -0.5456 | |
| 47 | I | A | -0.1468 | |
| 48 | G | A | 0.0000 | |
| 49 | R | A | -0.3798 | |
| 50 | L | A | -0.1559 | |
| 51 | A | A | -0.3293 | |
| 52 | F | A | 0.0000 | |
| 53 | R | A | -1.4356 | |
| 54 | R | A | -2.0041 | |
| 55 | I | A | -1.2804 | |
| 56 | Q | A | -1.9240 | |
| 57 | N | A | -1.9815 | |
| 58 | V | A | -1.1260 | |
| 59 | E | A | -1.5920 | |
| 60 | G | A | -0.2248 | |
| 61 | V | A | 0.1365 | |
| 62 | E | A | -0.4898 | |
| 63 | V | A | 0.0000 | |
| 64 | T | A | -0.2860 | |
| 65 | R | A | 0.0000 | |
| 66 | I | A | 0.0000 | |
| 67 | N | A | 0.0000 | |
| 68 | D | A | -0.2949 | |
| 69 | L | A | 0.3697 | |
| 70 | T | A | -0.2515 | |
| 71 | D | A | -1.4896 | |
| 72 | P | A | -1.6787 | |
| 73 | N | A | -1.9017 | |
| 74 | M | A | -0.5447 | |
| 75 | L | A | 0.0000 | |
| 76 | A | A | 0.0000 | |
| 77 | H | A | -0.5667 | |
| 78 | L | A | -0.0339 | |
| 79 | L | A | 0.0000 | |
| 80 | K | A | -1.1484 | |
| 81 | Y | A | 0.0163 | |
| 82 | D | A | 0.0000 | |
| 83 | T | A | -0.4390 | |
| 84 | T | A | -0.7946 | |
| 85 | Q | A | -1.3327 | |
| 86 | G | A | -1.5999 | |
| 87 | R | A | -2.3284 | |
| 88 | F | A | 0.0000 | |
| 89 | D | A | -2.7113 | |
| 90 | G | A | -1.9221 | |
| 91 | T | A | -1.6971 | |
| 92 | V | A | 0.0000 | |
| 93 | E | A | -2.0726 | |
| 94 | V | A | -1.3064 | |
| 95 | K | A | -2.3907 | |
| 96 | E | A | -2.7360 | |
| 97 | G | A | -1.7260 | |
| 98 | G | A | 0.0000 | |
| 99 | F | A | 0.0000 | |
| 100 | E | A | -1.5650 | |
| 101 | V | A | 0.0000 | |
| 102 | N | A | -2.1155 | |
| 103 | G | A | -1.5591 | |
| 104 | Q | A | -1.3450 | |
| 105 | F | A | -0.1033 | |
| 106 | V | A | 0.0000 | |
| 107 | K | A | -1.0947 | |
| 108 | V | A | 0.0000 | |
| 109 | S | A | -0.7031 | |
| 110 | A | A | -0.6493 | |
| 111 | E | A | -1.9536 | |
| 112 | R | A | -2.8115 | |
| 113 | E | A | -3.0010 | |
| 114 | P | A | 0.0000 | |
| 115 | A | A | -2.1638 | |
| 116 | N | A | -2.6095 | |
| 117 | I | A | 0.0000 | |
| 118 | D | A | -1.8313 | |
| 119 | W | A | 0.0000 | |
| 120 | A | A | -1.5132 | |
| 121 | T | A | -0.6798 | |
| 122 | D | A | -0.8103 | |
| 123 | G | A | -0.7117 | |
| 124 | V | A | 0.0000 | |
| 125 | E | A | -1.3912 | |
| 126 | I | A | -0.6388 | |
| 127 | V | A | 0.0000 | |
| 128 | L | A | 0.6498 | |
| 129 | E | A | 0.0000 | |
| 130 | A | A | 0.0408 | |
| 131 | T | A | 0.2795 | |
| 132 | G | A | 0.1703 | |
| 133 | F | A | 1.6653 | |
| 134 | F | A | -0.2050 | |
| 135 | A | A | -0.5735 | |
| 136 | S | A | -1.6362 | |
| 137 | K | A | -3.0748 | |
| 138 | E | A | -3.5575 | |
| 139 | K | A | -2.4868 | |
| 140 | A | A | 0.0000 | |
| 141 | E | A | -2.6700 | |
| 142 | Q | A | -1.9204 | |
| 143 | H | A | 0.0000 | |
| 144 | I | A | -1.0286 | |
| 145 | H | A | -1.8371 | |
| 146 | E | A | -2.6281 | |
| 147 | N | A | -2.6523 | |
| 148 | G | A | -2.2016 | |
| 149 | A | A | 0.0000 | |
| 150 | K | A | -2.8122 | |
| 151 | K | A | -2.1378 | |
| 152 | V | A | -0.6382 | |
| 153 | V | A | 0.3851 | |
| 154 | I | A | 0.0836 | |
| 155 | L | A | -0.3868 | |
| 156 | E | A | -2.3614 | |
| 157 | H | A | -2.6280 | |
| 158 | H | A | -2.8526 | |
| 159 | H | A | -2.9247 | |
| 160 | H | A | -2.6759 | |
| 161 | H | A | -2.3880 | |
| 162 | H | A | -1.9025 |