| Chain sequence(s) |
A: WLGCARVKEACGPWEWPCCSGLKCDGSECHPQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:27)
[INFO] Main: Simulation completed successfully. (00:00:27)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | W | A | 1.8846 | |
| 2 | L | A | 2.0195 | |
| 3 | G | A | 0.7068 | |
| 4 | C | A | 0.5451 | |
| 5 | A | A | 0.0000 | |
| 6 | R | A | -2.9316 | |
| 7 | V | A | -2.6771 | |
| 8 | K | A | -3.3004 | |
| 9 | E | A | -2.8669 | |
| 10 | A | A | -2.0360 | |
| 11 | C | A | -1.5380 | |
| 12 | G | A | -1.0482 | |
| 13 | P | A | -0.2127 | |
| 14 | W | A | 0.4688 | |
| 15 | E | A | -0.7762 | |
| 16 | W | A | 0.5123 | |
| 17 | P | A | -0.0067 | |
| 18 | C | A | -0.5862 | |
| 19 | C | A | -0.2096 | |
| 20 | S | A | -0.6735 | |
| 21 | G | A | -0.9876 | |
| 22 | L | A | -1.9456 | |
| 23 | K | A | -3.1415 | |
| 24 | C | A | -2.9465 | |
| 25 | D | A | -3.2719 | |
| 26 | G | A | -2.1240 | |
| 27 | S | A | -2.4221 | |
| 28 | E | A | -3.8036 | |
| 29 | C | A | 0.0000 | |
| 30 | H | A | -3.0897 | |
| 31 | P | A | -2.1131 | |
| 32 | Q | A | -2.1721 |