Project name: query_structure

Status: done

Started: 2026-03-16 23:23:43
Settings
Chain sequence(s) A: GIPCGESCVFIPCISSVVGCSCKSKVCYLD
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:14)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:15)
Show buried residues

Minimal score value
-1.8055
Maximal score value
2.947
Average score
0.7923
Total score value
23.7701

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.1269
2 I A 1.5353
3 P A 0.5155
4 C A 0.7581
5 G A 0.0772
6 E A 0.2090
7 S A 0.6974
8 C A 1.3580
9 V A 2.5285
10 F A 2.9470
11 I A 2.2693
12 P A 1.4449
13 C A 1.7574
14 I A 2.6064
15 S A 2.0964
16 S A 1.9439
17 V A 2.8961
18 V A 2.7576
19 G A 0.9508
20 C A 0.0000
21 S A 0.1296
22 C A -0.3365
23 K A -1.8055
24 S A -1.1594
25 K A -0.9007
26 V A -0.3630
27 C A 0.0000
28 Y A -0.0003
29 L A 0.3902
30 D A -1.4062
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Laboratory of Theory of Biopolymers 2018