| Chain sequence(s) |
A: GPLPLDPAPELRSTDEYVIPTDLLYYAETDLITETGNPFKDIVKDGKVVTPKVSAYQYRVFLLKLPDPNKMELPSSDFVDFSTHILIWRLLAFKIHRFGPLGTGSYGHPNFNALGDIDNPTEYQHETEDVTQDLSFTPKLLQEYIIGNEPPTGKYTAPAEPEPGLPPGAVPPTKTVTTTIQHGDMADIGFGAKDFKALDPRKNNVPDIILDTTTKVFDYDGMRAEPYGNRLFTSNRKESSKNVRTLRLAGPDPVPLPSASPPSSLYVPPPPSSPYAVLPSYNIFTLPDRGEIKEEDLLFNQPIFLEKTEGLNNGVLWGNRLYITVVDNSRDTIEKKETQLSTPEPNVYDPSNYVTSYTYTEEYKISLIVQLCKIPLTPETLAYLERLDPSILVDAELPDIPPVERADPYAGLKFIEIDLTNKFSRDLSKSELGRYYLNR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:09)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:09)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:09)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:09)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:09)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:10)
[INFO] Main: Simulation completed successfully. (00:00:14)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.2112 | |
| 2 | P | A | 0.4170 | |
| 3 | L | A | 1.3192 | |
| 4 | P | A | 0.5630 | |
| 5 | L | A | 0.8813 | |
| 6 | D | A | -1.0441 | |
| 7 | P | A | -1.0594 | |
| 8 | A | A | -0.7298 | |
| 9 | P | A | -1.5131 | |
| 10 | E | A | -1.6783 | |
| 11 | L | A | -0.2231 | |
| 12 | R | A | -1.2446 | |
| 13 | S | A | -1.3224 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.6660 | |
| 16 | E | A | -2.5545 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | I | A | 0.4911 | |
| 20 | P | A | -0.2731 | |
| 21 | T | A | -0.6436 | |
| 22 | D | A | -1.7920 | |
| 23 | L | A | 0.0000 | |
| 24 | L | A | -0.8114 | |
| 25 | Y | A | 0.0000 | |
| 26 | Y | A | -0.8432 | |
| 27 | A | A | 0.0000 | |
| 28 | E | A | -0.7425 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -1.2116 | |
| 31 | L | A | 0.6052 | |
| 32 | I | A | 0.2968 | |
| 33 | T | A | -0.0850 | |
| 34 | E | A | -0.5321 | |
| 35 | T | A | -0.4165 | |
| 36 | G | A | 0.0000 | |
| 37 | N | A | -0.5838 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.7191 | |
| 40 | K | A | -1.9544 | |
| 41 | D | A | -0.8816 | |
| 42 | I | A | 0.8178 | |
| 43 | V | A | 0.8086 | |
| 44 | K | A | -1.4769 | |
| 45 | D | A | -2.4719 | |
| 46 | G | A | -1.5248 | |
| 47 | K | A | -1.2062 | |
| 48 | V | A | 1.1573 | |
| 49 | V | A | 1.7296 | |
| 50 | T | A | 0.7535 | |
| 51 | P | A | -0.0231 | |
| 52 | K | A | -0.9089 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | A | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | Y | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | L | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -1.8746 | |
| 65 | L | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.1792 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.5195 | |
| 70 | K | A | -2.2130 | |
| 71 | M | A | -1.6412 | |
| 72 | E | A | -2.0944 | |
| 73 | L | A | -1.1512 | |
| 74 | P | A | -0.7393 | |
| 75 | S | A | -0.9925 | |
| 76 | S | A | -1.4930 | |
| 77 | D | A | -2.0484 | |
| 78 | F | A | -0.9023 | |
| 79 | V | A | 0.0000 | |
| 80 | D | A | -1.7463 | |
| 81 | F | A | -0.0214 | |
| 82 | S | A | -0.2815 | |
| 83 | T | A | -0.4000 | |
| 84 | H | A | -0.2726 | |
| 85 | I | A | 0.0000 | |
| 86 | L | A | 0.0000 | |
| 87 | I | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | -0.3209 | |
| 90 | L | A | 0.0000 | |
| 91 | L | A | -0.2890 | |
| 92 | A | A | 0.0000 | |
| 93 | F | A | 0.0000 | |
| 94 | K | A | 0.0000 | |
| 95 | I | A | 0.0000 | |
| 96 | H | A | -0.3012 | |
| 97 | R | A | 0.0000 | |
| 98 | F | A | 0.6133 | |
| 99 | G | A | 0.0128 | |
| 100 | P | A | 0.0862 | |
| 101 | L | A | 0.1547 | |
| 102 | G | A | 0.2275 | |
| 103 | T | A | -0.1386 | |
| 104 | G | A | 0.0000 | |
| 105 | S | A | -0.2096 | |
| 106 | Y | A | 0.0000 | |
| 107 | G | A | -1.1794 | |
| 108 | H | A | -1.9312 | |
| 109 | P | A | -2.1534 | |
| 110 | N | A | -2.9189 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | 0.0000 | |
| 113 | A | A | 0.0000 | |
| 114 | L | A | 0.0000 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.6415 | |
| 117 | I | A | -1.6081 | |
| 118 | D | A | -2.7388 | |
| 119 | N | A | -2.6840 | |
| 120 | P | A | -1.9993 | |
| 121 | T | A | -1.5681 | |
| 122 | E | A | -1.9910 | |
| 123 | Y | A | -0.3674 | |
| 124 | Q | A | -0.8729 | |
| 125 | H | A | -0.9720 | |
| 126 | E | A | -1.8234 | |
| 127 | T | A | -2.0560 | |
| 128 | E | A | -2.9455 | |
| 129 | D | A | -2.9631 | |
| 130 | V | A | -1.7855 | |
| 131 | T | A | -2.0101 | |
| 132 | Q | A | -2.4988 | |
| 133 | D | A | -2.8455 | |
| 134 | L | A | 0.0000 | |
| 135 | S | A | -0.9325 | |
| 136 | F | A | 0.0000 | |
| 137 | T | A | -0.1225 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | L | A | 0.0000 | |
| 141 | L | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | E | A | 0.0000 | |
| 144 | Y | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | I | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | N | A | 0.0000 | |
| 149 | E | A | -0.6463 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | -0.4820 | |
| 153 | G | A | 0.0000 | |
| 154 | K | A | -0.5298 | |
| 155 | Y | A | -0.6475 | |
| 156 | T | A | -0.9253 | |
| 157 | A | A | 0.0000 | |
| 158 | P | A | -1.1461 | |
| 159 | A | A | -1.8817 | |
| 160 | E | A | -2.7250 | |
| 161 | P | A | -1.9424 | |
| 162 | E | A | -2.5206 | |
| 163 | P | A | -1.5532 | |
| 164 | G | A | -0.9144 | |
| 165 | L | A | -0.2792 | |
| 166 | P | A | -0.1462 | |
| 167 | P | A | -0.3077 | |
| 168 | G | A | -0.2184 | |
| 169 | A | A | 0.6431 | |
| 170 | V | A | 1.4573 | |
| 171 | P | A | 0.0165 | |
| 172 | P | A | -0.8528 | |
| 173 | T | A | -1.1600 | |
| 174 | K | A | -2.0373 | |
| 175 | T | A | -0.9841 | |
| 176 | V | A | -0.4982 | |
| 177 | T | A | -0.3492 | |
| 178 | T | A | -0.1681 | |
| 179 | T | A | -0.2063 | |
| 180 | I | A | 0.0000 | |
| 181 | Q | A | -0.7957 | |
| 182 | H | A | -0.9570 | |
| 183 | G | A | -0.6739 | |
| 184 | D | A | -0.6275 | |
| 185 | M | A | 0.0000 | |
| 186 | A | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | -0.6119 | |
| 190 | F | A | 0.0000 | |
| 191 | G | A | -0.3822 | |
| 192 | A | A | -0.5033 | |
| 193 | K | A | -1.2829 | |
| 194 | D | A | -1.3630 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -2.9864 | |
| 197 | A | A | -1.3820 | |
| 198 | L | A | -1.0947 | |
| 199 | D | A | 0.0000 | |
| 200 | P | A | -2.0498 | |
| 201 | R | A | -2.7727 | |
| 202 | K | A | -3.5101 | |
| 203 | N | A | -2.3526 | |
| 204 | N | A | -1.4608 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | D | A | -1.8602 | |
| 208 | I | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | L | A | -2.2518 | |
| 211 | D | A | -3.0404 | |
| 212 | T | A | -1.6764 | |
| 213 | T | A | -1.1453 | |
| 214 | T | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | V | A | 0.0265 | |
| 217 | F | A | 0.0000 | |
| 218 | D | A | -1.0676 | |
| 219 | Y | A | -1.4876 | |
| 220 | D | A | -2.5387 | |
| 221 | G | A | -1.8525 | |
| 222 | M | A | 0.0000 | |
| 223 | R | A | -3.0258 | |
| 224 | A | A | -1.6499 | |
| 225 | E | A | -1.3938 | |
| 226 | P | A | -0.5149 | |
| 227 | Y | A | -0.3608 | |
| 228 | G | A | 0.0000 | |
| 229 | N | A | -0.8288 | |
| 230 | R | A | -0.9759 | |
| 231 | L | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | T | A | -0.7899 | |
| 234 | S | A | -0.7163 | |
| 235 | N | A | -1.1956 | |
| 236 | R | A | -1.9133 | |
| 237 | K | A | -2.2350 | |
| 238 | E | A | -2.2850 | |
| 239 | S | A | -1.8175 | |
| 240 | S | A | -1.9538 | |
| 241 | K | A | -2.4742 | |
| 242 | N | A | -2.0676 | |
| 243 | V | A | -0.8907 | |
| 244 | R | A | -1.9481 | |
| 245 | T | A | -0.9484 | |
| 246 | L | A | 0.0000 | |
| 247 | R | A | 0.2206 | |
| 248 | L | A | 0.4320 | |
| 249 | A | A | -0.5654 | |
| 250 | G | A | -0.4185 | |
| 251 | P | A | -0.4085 | |
| 252 | D | A | 0.1142 | |
| 253 | P | A | 0.6638 | |
| 254 | V | A | 1.5528 | |
| 255 | P | A | 0.6719 | |
| 256 | L | A | 1.1220 | |
| 257 | P | A | 0.4667 | |
| 258 | S | A | -0.1246 | |
| 259 | A | A | 0.3361 | |
| 260 | S | A | -0.2365 | |
| 261 | P | A | -0.0158 | |
| 262 | P | A | 0.0478 | |
| 263 | S | A | 0.6249 | |
| 264 | S | A | 0.7680 | |
| 265 | L | A | 1.9129 | |
| 266 | Y | A | 1.7515 | |
| 267 | V | A | 1.9815 | |
| 268 | P | A | 1.2085 | |
| 269 | P | A | 0.7512 | |
| 270 | P | A | -0.1359 | |
| 271 | P | A | -0.1255 | |
| 272 | S | A | -0.1455 | |
| 273 | S | A | 0.2267 | |
| 274 | P | A | 0.5650 | |
| 275 | Y | A | 1.5344 | |
| 276 | A | A | 1.2024 | |
| 277 | V | A | 2.0319 | |
| 278 | L | A | 1.5918 | |
| 279 | P | A | 0.4172 | |
| 280 | S | A | 0.0000 | |
| 281 | Y | A | 1.1249 | |
| 282 | N | A | 0.8468 | |
| 283 | I | A | 2.0574 | |
| 284 | F | A | 0.9490 | |
| 285 | T | A | -0.4238 | |
| 286 | L | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | D | A | -1.4486 | |
| 289 | R | A | 0.0000 | |
| 290 | G | A | -1.6989 | |
| 291 | E | A | -2.1570 | |
| 292 | I | A | -2.0162 | |
| 293 | K | A | -3.3659 | |
| 294 | E | A | -3.4678 | |
| 295 | E | A | -3.5422 | |
| 296 | D | A | -2.8825 | |
| 297 | L | A | -1.9844 | |
| 298 | L | A | 0.0000 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.0426 | |
| 301 | Q | A | -1.2536 | |
| 302 | P | A | -0.3782 | |
| 303 | I | A | 0.1679 | |
| 304 | F | A | -0.2337 | |
| 305 | L | A | 0.0000 | |
| 306 | E | A | -2.4904 | |
| 307 | K | A | -3.0789 | |
| 308 | T | A | 0.0000 | |
| 309 | E | A | -2.3869 | |
| 310 | G | A | -1.4937 | |
| 311 | L | A | -0.7210 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | -1.5325 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | L | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | G | A | -0.6354 | |
| 319 | N | A | -0.7558 | |
| 320 | R | A | -0.9547 | |
| 321 | L | A | 0.0000 | |
| 322 | Y | A | 0.0000 | |
| 323 | I | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | S | A | 0.0000 | |
| 330 | R | A | 0.0000 | |
| 331 | D | A | 0.0000 | |
| 332 | T | A | -0.5466 | |
| 333 | I | A | -1.0614 | |
| 334 | E | A | -2.7619 | |
| 335 | K | A | -3.5950 | |
| 336 | K | A | -3.5008 | |
| 337 | E | A | -2.4366 | |
| 338 | T | A | -0.8072 | |
| 339 | Q | A | -0.0149 | |
| 340 | L | A | 1.1652 | |
| 341 | S | A | 0.0452 | |
| 342 | T | A | -0.6201 | |
| 343 | P | A | -1.2771 | |
| 344 | E | A | -1.8445 | |
| 345 | P | A | -0.9896 | |
| 346 | N | A | -0.7462 | |
| 347 | V | A | 1.2904 | |
| 348 | Y | A | 1.1872 | |
| 349 | D | A | -0.0874 | |
| 350 | P | A | 0.1140 | |
| 351 | S | A | 0.0074 | |
| 352 | N | A | -0.0196 | |
| 353 | Y | A | 0.4390 | |
| 354 | V | A | 0.6757 | |
| 355 | T | A | -0.9897 | |
| 356 | S | A | -1.3328 | |
| 357 | Y | A | -1.2273 | |
| 358 | T | A | -1.0443 | |
| 359 | Y | A | 0.0000 | |
| 360 | T | A | -0.4722 | |
| 361 | E | A | 0.0000 | |
| 362 | E | A | -0.0256 | |
| 363 | Y | A | 0.0000 | |
| 364 | K | A | -0.3361 | |
| 365 | I | A | 0.0000 | |
| 366 | S | A | 0.0000 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | V | A | 0.0000 | |
| 370 | Q | A | -0.4531 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | 0.0338 | |
| 374 | I | A | 0.0000 | |
| 375 | P | A | -0.1510 | |
| 376 | L | A | -0.0540 | |
| 377 | T | A | -0.6091 | |
| 378 | P | A | -0.9681 | |
| 379 | E | A | -1.7876 | |
| 380 | T | A | 0.0000 | |
| 381 | L | A | -0.9498 | |
| 382 | A | A | -1.4988 | |
| 383 | Y | A | 0.0000 | |
| 384 | L | A | 0.0000 | |
| 385 | E | A | -2.7416 | |
| 386 | R | A | -2.7852 | |
| 387 | L | A | -1.3603 | |
| 388 | D | A | -1.5967 | |
| 389 | P | A | -1.7264 | |
| 390 | S | A | -1.1574 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | 0.0000 | |
| 393 | V | A | -1.1109 | |
| 394 | D | A | -1.2930 | |
| 395 | A | A | -1.2308 | |
| 396 | E | A | -2.0096 | |
| 397 | L | A | -1.2032 | |
| 398 | P | A | -1.4134 | |
| 399 | D | A | -1.9635 | |
| 400 | I | A | -0.7372 | |
| 401 | P | A | -0.5656 | |
| 402 | P | A | -0.5791 | |
| 403 | V | A | 0.3916 | |
| 404 | E | A | -1.4095 | |
| 405 | R | A | -1.2473 | |
| 406 | A | A | -0.7745 | |
| 407 | D | A | -0.9963 | |
| 408 | P | A | -0.5568 | |
| 409 | Y | A | -0.4220 | |
| 410 | A | A | -0.4707 | |
| 411 | G | A | -0.6501 | |
| 412 | L | A | -0.6351 | |
| 413 | K | A | -1.8206 | |
| 414 | F | A | -1.0612 | |
| 415 | I | A | -1.0481 | |
| 416 | E | A | -2.3080 | |
| 417 | I | A | -1.8605 | |
| 418 | D | A | -2.7280 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.5688 | |
| 421 | N | A | -1.9605 | |
| 422 | K | A | -1.9154 | |
| 423 | F | A | -1.0217 | |
| 424 | S | A | -1.6523 | |
| 425 | R | A | -2.3281 | |
| 426 | D | A | -2.3570 | |
| 427 | L | A | 0.0000 | |
| 428 | S | A | -2.0258 | |
| 429 | K | A | -2.8033 | |
| 430 | S | A | 0.0000 | |
| 431 | E | A | -1.6807 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -2.1773 | |
| 435 | Y | A | -0.5820 | |
| 436 | Y | A | -0.1689 | |
| 437 | L | A | 0.0779 | |
| 438 | N | A | -1.5475 | |
| 439 | R | A | -1.8638 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine