| Chain sequence(s) |
H: EVQLVQSGAEVKKPGESLKISCKGSGYSFTSYWIGWVRQMPGKGLEWMGIIDPSDSDTRYSPSFQGQVTISADKSISTAYLQWSSLKASDTAMYYCARVGPADVWDSFDYWGQGTLVTVSSSASTKGPSVFPLAPSGTAALGCCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS
L: DIVMTQSPDSLAVSLGERATINCKSSQSVLLSPWNSSNQLAWYQQKPGQPPKLLIYGASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYLIPPSSTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACCEVTHQGLSSPVTKSFNRGE input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:44)
[INFO] Main: Simulation completed successfully. (00:03:47)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | D | L | -1.3921 | |
| 2 | I | L | 0.0000 | |
| 3 | V | L | 0.8398 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -0.5948 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -1.2528 | |
| 8 | P | L | -1.2613 | |
| 9 | D | L | -2.3354 | |
| 10 | S | L | -1.3596 | |
| 11 | L | L | -0.7306 | |
| 12 | A | L | -0.5762 | |
| 13 | V | L | 0.0000 | |
| 14 | S | L | -1.3544 | |
| 15 | L | L | -0.3827 | |
| 16 | G | L | -1.2957 | |
| 17 | E | L | -2.8715 | |
| 18 | R | L | -2.8102 | |
| 19 | A | L | 0.0000 | |
| 20 | T | L | -0.5740 | |
| 21 | I | L | 0.0000 | |
| 22 | N | L | -1.0485 | |
| 23 | C | L | 0.0000 | |
| 24 | K | L | -1.6674 | |
| 25 | S | L | 0.0000 | |
| 26 | S | L | -0.8751 | |
| 27 | Q | L | -1.4870 | |
| 28 | S | L | -0.8757 | |
| 29 | V | L | 0.0000 | |
| 30 | L | L | 0.0375 | |
| 31 | L | L | 0.2818 | |
| 32 | S | L | -0.2763 | |
| 33 | P | L | -0.1822 | |
| 34 | W | L | 0.3706 | |
| 35 | N | L | -0.8289 | |
| 36 | S | L | -0.2891 | |
| 37 | N | L | -0.1462 | |
| 38 | Q | L | 0.0000 | |
| 39 | L | L | 0.0000 | |
| 40 | A | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | 0.0000 | |
| 45 | K | L | -1.7768 | |
| 46 | P | L | -1.3700 | |
| 47 | G | L | -1.4743 | |
| 48 | Q | L | -2.1373 | |
| 49 | P | L | -1.4401 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -1.5929 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | 0.0179 | |
| 56 | G | L | -0.3082 | |
| 57 | A | L | 0.0000 | |
| 58 | S | L | -0.6211 | |
| 59 | T | L | -0.6021 | |
| 60 | R | L | -1.4847 | |
| 61 | E | L | -1.1973 | |
| 62 | S | L | -0.8768 | |
| 63 | G | L | -1.0566 | |
| 64 | V | L | 0.0000 | |
| 65 | P | L | -1.4040 | |
| 66 | D | L | -2.2047 | |
| 67 | R | L | -1.5002 | |
| 68 | F | L | 0.0000 | |
| 69 | S | L | -0.8877 | |
| 70 | G | L | -0.5176 | |
| 71 | S | L | -0.7358 | |
| 72 | G | L | -1.1013 | |
| 73 | S | L | -1.0423 | |
| 74 | G | L | -0.9937 | |
| 75 | T | L | -1.4202 | |
| 76 | D | L | -1.9142 | |
| 77 | F | L | 0.0000 | |
| 78 | T | L | -0.7623 | |
| 79 | L | L | 0.0000 | |
| 80 | T | L | -0.6085 | |
| 81 | I | L | 0.0000 | |
| 82 | S | L | -1.7339 | |
| 83 | S | L | -1.7377 | |
| 84 | L | L | 0.0000 | |
| 85 | Q | L | -1.1686 | |
| 86 | A | L | -0.7054 | |
| 87 | E | L | -1.8902 | |
| 88 | D | L | 0.0000 | |
| 89 | V | L | -0.4196 | |
| 90 | A | L | 0.0000 | |
| 91 | V | L | 0.0000 | |
| 92 | Y | L | 0.0000 | |
| 93 | Y | L | 0.0000 | |
| 94 | C | L | 0.0000 | |
| 95 | Q | L | 0.0000 | |
| 96 | Q | L | 0.0000 | |
| 97 | Y | L | 0.0000 | |
| 98 | Y | L | 0.9240 | |
| 99 | L | L | 0.8680 | |
| 100 | I | L | 0.5530 | |
| 101 | P | L | 0.0733 | |
| 102 | S | L | 0.0000 | |
| 103 | T | L | 0.2033 | |
| 104 | F | L | 0.1116 | |
| 105 | G | L | 0.0000 | |
| 106 | Q | L | -1.4073 | |
| 107 | G | L | 0.0000 | |
| 108 | T | L | 0.0000 | |
| 109 | K | L | -1.6336 | |
| 110 | V | L | 0.0000 | |
| 111 | E | L | 0.0000 | |
| 112 | I | L | -0.5020 | |
| 113 | K | L | -1.6514 | |
| 114 | R | L | -0.9583 | |
| 115 | T | L | 0.1011 | |
| 116 | V | L | 1.0649 | |
| 117 | A | L | 0.4588 | |
| 118 | A | L | 0.0545 | |
| 119 | P | L | 0.0000 | |
| 120 | S | L | -0.0789 | |
| 121 | V | L | 0.0386 | |
| 122 | F | L | 0.1064 | |
| 123 | I | L | 0.0000 | |
| 124 | F | L | 0.0000 | |
| 125 | P | L | -0.5386 | |
| 126 | P | L | 0.0000 | |
| 127 | S | L | -1.9008 | |
| 128 | D | L | -3.0273 | |
| 129 | E | L | -3.1374 | |
| 130 | Q | L | 0.0000 | |
| 131 | L | L | -2.3694 | |
| 132 | K | L | -2.8911 | |
| 133 | S | L | -1.7823 | |
| 134 | G | L | -1.4185 | |
| 135 | T | L | -1.0821 | |
| 136 | A | L | 0.0000 | |
| 137 | S | L | 0.0000 | |
| 138 | V | L | 0.0000 | |
| 139 | V | L | 0.0000 | |
| 140 | C | L | 0.0000 | |
| 141 | L | L | 0.0000 | |
| 142 | L | L | 0.0000 | |
| 143 | N | L | 0.0000 | |
| 144 | N | L | -0.7666 | |
| 145 | F | L | 0.0000 | |
| 146 | Y | L | 0.0000 | |
| 147 | P | L | -1.1732 | |
| 148 | R | L | -2.0418 | |
| 149 | E | L | -2.7840 | |
| 150 | A | L | -2.1034 | |
| 151 | K | L | -2.2328 | |
| 152 | V | L | -1.1445 | |
| 153 | Q | L | -0.6321 | |
| 154 | W | L | 0.0000 | |
| 155 | K | L | -0.4857 | |
| 156 | V | L | 0.0000 | |
| 157 | D | L | -1.7304 | |
| 158 | N | L | -1.3022 | |
| 159 | A | L | -0.2228 | |
| 160 | L | L | 0.7449 | |
| 161 | Q | L | -0.1312 | |
| 162 | S | L | -0.4120 | |
| 163 | G | L | -0.9675 | |
| 164 | N | L | -0.9505 | |
| 165 | S | L | -1.2157 | |
| 166 | Q | L | -1.4900 | |
| 167 | E | L | -1.9428 | |
| 168 | S | L | -0.9573 | |
| 169 | V | L | -0.4996 | |
| 170 | T | L | -0.9646 | |
| 171 | E | L | -2.0825 | |
| 172 | Q | L | -1.6664 | |
| 173 | D | L | -1.8511 | |
| 174 | S | L | -1.6833 | |
| 175 | K | L | -2.2671 | |
| 176 | D | L | -1.6766 | |
| 177 | S | L | -1.7045 | |
| 178 | T | L | 0.0000 | |
| 179 | Y | L | 0.0000 | |
| 180 | S | L | 0.0000 | |
| 181 | L | L | 0.0000 | |
| 182 | S | L | 0.0000 | |
| 183 | S | L | 0.0000 | |
| 184 | T | L | -0.7104 | |
| 185 | L | L | 0.0000 | |
| 186 | T | L | -0.4953 | |
| 187 | L | L | -0.7764 | |
| 188 | S | L | -1.1903 | |
| 189 | K | L | -2.2024 | |
| 190 | A | L | -2.0594 | |
| 191 | D | L | -2.9576 | |
| 192 | Y | L | 0.0000 | |
| 193 | E | L | -3.5751 | |
| 194 | K | L | -3.6878 | |
| 195 | H | L | -2.8213 | |
| 196 | K | L | -2.4387 | |
| 197 | V | L | -0.8079 | |
| 198 | Y | L | 0.0000 | |
| 199 | A | L | -0.6766 | |
| 200 | C | L | 0.0000 | |
| 201 | E | L | -0.9219 | |
| 202 | V | L | 0.0000 | |
| 203 | T | L | -1.2810 | |
| 204 | H | L | 0.0000 | |
| 205 | Q | L | -1.3802 | |
| 206 | G | L | -0.2475 | |
| 207 | L | L | -0.1633 | |
| 208 | S | L | -0.4577 | |
| 209 | S | L | -0.4637 | |
| 210 | P | L | -0.6584 | |
| 211 | V | L | -0.0833 | |
| 212 | T | L | -0.5109 | |
| 213 | K | L | -0.7006 | |
| 214 | S | L | -0.4642 | |
| 215 | F | L | -0.6975 | |
| 216 | N | L | -1.4735 | |
| 217 | R | L | -2.1149 | |
| 218 | G | L | -1.9481 | |
| 219 | E | L | -2.3746 | |
| 1 | E | H | -2.1748 | |
| 2 | V | H | -1.2578 | |
| 3 | Q | H | -1.5092 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 0.3480 | |
| 6 | Q | H | 0.0000 | |
| 7 | S | H | -0.4570 | |
| 8 | G | H | -0.3118 | |
| 9 | A | H | 0.1177 | |
| 10 | E | H | -0.0698 | |
| 11 | V | H | 0.7839 | |
| 12 | K | H | -0.7783 | |
| 13 | K | H | -1.8034 | |
| 14 | P | H | -1.9923 | |
| 15 | G | H | -1.9102 | |
| 16 | E | H | -2.0879 | |
| 17 | S | H | -1.7415 | |
| 18 | L | H | 0.0000 | |
| 19 | K | H | -2.0024 | |
| 20 | I | H | 0.0000 | |
| 21 | S | H | -0.5226 | |
| 22 | C | H | 0.0000 | |
| 23 | K | H | -0.6219 | |
| 24 | G | H | 0.0000 | |
| 25 | S | H | -0.7508 | |
| 26 | G | H | -1.2873 | |
| 27 | Y | H | -0.5724 | |
| 28 | S | H | -0.3823 | |
| 29 | F | H | 0.0000 | |
| 30 | T | H | -0.9579 | |
| 31 | S | H | -0.1845 | |
| 32 | Y | H | 0.1030 | |
| 33 | W | H | 0.0142 | |
| 34 | I | H | 0.0000 | |
| 35 | G | H | 0.0000 | |
| 36 | W | H | 0.0000 | |
| 37 | V | H | 0.0000 | |
| 38 | R | H | -0.6018 | |
| 39 | Q | H | -0.8177 | |
| 40 | M | H | -0.7502 | |
| 41 | P | H | -0.8961 | |
| 42 | G | H | -1.4091 | |
| 43 | K | H | -2.2581 | |
| 44 | G | H | -1.4661 | |
| 45 | L | H | 0.0000 | |
| 46 | E | H | -1.0319 | |
| 47 | W | H | 0.0000 | |
| 48 | M | H | 0.0000 | |
| 49 | G | H | 0.0000 | |
| 50 | I | H | 0.0000 | |
| 51 | I | H | 0.0000 | |
| 52 | D | H | -1.2270 | |
| 53 | P | H | 0.0000 | |
| 54 | S | H | -1.7047 | |
| 55 | D | H | -2.5149 | |
| 56 | S | H | -1.8808 | |
| 57 | D | H | -1.4907 | |
| 58 | T | H | -0.9169 | |
| 59 | R | H | -0.8165 | |
| 60 | Y | H | -0.5473 | |
| 61 | S | H | 0.0000 | |
| 62 | P | H | -0.9407 | |
| 63 | S | H | -0.8949 | |
| 64 | F | H | 0.0000 | |
| 65 | Q | H | -1.8601 | |
| 66 | G | H | -1.5040 | |
| 67 | Q | H | -1.6261 | |
| 68 | V | H | 0.0000 | |
| 69 | T | H | -0.8702 | |
| 70 | I | H | 0.0000 | |
| 71 | S | H | -0.7671 | |
| 72 | A | H | -1.1672 | |
| 73 | D | H | -1.5378 | |
| 74 | K | H | -2.0783 | |
| 75 | S | H | -0.4434 | |
| 76 | I | H | 0.7409 | |
| 77 | S | H | -0.3938 | |
| 78 | T | H | 0.0000 | |
| 79 | A | H | 0.0000 | |
| 80 | Y | H | -0.6625 | |
| 81 | L | H | 0.0000 | |
| 82 | Q | H | -1.3643 | |
| 83 | W | H | 0.0000 | |
| 84 | S | H | -1.1128 | |
| 85 | S | H | -1.5352 | |
| 86 | L | H | 0.0000 | |
| 87 | K | H | -2.3477 | |
| 88 | A | H | -1.2321 | |
| 89 | S | H | -0.7620 | |
| 90 | D | H | 0.0000 | |
| 91 | T | H | -0.1740 | |
| 92 | A | H | 0.0000 | |
| 93 | M | H | 0.2113 | |
| 94 | Y | H | 0.0000 | |
| 95 | Y | H | 0.0000 | |
| 96 | C | H | 0.0000 | |
| 97 | A | H | 0.0000 | |
| 98 | R | H | 0.0000 | |
| 99 | V | H | 0.0000 | |
| 100 | G | H | 0.0000 | |
| 101 | P | H | -0.5532 | |
| 102 | A | H | -0.6766 | |
| 103 | D | H | -1.3899 | |
| 104 | V | H | 0.2041 | |
| 105 | W | H | 0.3299 | |
| 106 | D | H | -0.1064 | |
| 107 | S | H | 0.0000 | |
| 108 | F | H | 0.0000 | |
| 109 | D | H | -0.3258 | |
| 110 | Y | H | -0.1938 | |
| 111 | W | H | -0.2542 | |
| 112 | G | H | 0.0000 | |
| 113 | Q | H | -1.1026 | |
| 114 | G | H | -0.5101 | |
| 115 | T | H | 0.0000 | |
| 116 | L | H | 0.5188 | |
| 117 | V | H | 0.0000 | |
| 118 | T | H | 0.0164 | |
| 119 | V | H | 0.0000 | |
| 120 | S | H | -0.7009 | |
| 121 | S | H | -0.7858 | |
| 122 | A | H | -0.4417 | |
| 123 | S | H | -0.5126 | |
| 124 | T | H | -0.5821 | |
| 125 | K | H | -1.2145 | |
| 126 | G | H | -1.3310 | |
| 127 | P | H | 0.0000 | |
| 128 | S | H | -0.3974 | |
| 129 | V | H | 0.0000 | |
| 130 | F | H | 0.0000 | |
| 131 | P | H | -1.3066 | |
| 132 | L | H | 0.0000 | |
| 133 | A | H | -1.2740 | |
| 134 | P | H | 0.0000 | |
| 135 | S | H | -0.6986 | |
| 142 | G | H | -0.6727 | |
| 143 | T | H | -0.4976 | |
| 144 | A | H | -0.2543 | |
| 145 | A | H | 0.0000 | |
| 146 | L | H | 0.0000 | |
| 147 | G | H | 0.0000 | |
| 148 | C | H | 0.0000 | |
| 149 | L | H | 0.0000 | |
| 150 | V | H | 0.0000 | |
| 151 | K | H | 0.0000 | |
| 152 | D | H | -0.4616 | |
| 153 | Y | H | 0.0000 | |
| 154 | F | H | 0.0000 | |
| 155 | P | H | -0.6971 | |
| 156 | E | H | -1.1238 | |
| 157 | P | H | -1.1829 | |
| 158 | V | H | -0.8923 | |
| 159 | T | H | -0.5651 | |
| 160 | V | H | -0.2409 | |
| 161 | S | H | -0.3176 | |
| 162 | W | H | 0.0000 | |
| 163 | N | H | -0.7036 | |
| 164 | S | H | -0.6326 | |
| 165 | G | H | -0.5573 | |
| 166 | A | H | -0.2523 | |
| 167 | L | H | -0.0373 | |
| 168 | T | H | -0.1907 | |
| 169 | S | H | -0.4046 | |
| 170 | G | H | -0.4864 | |
| 171 | V | H | 0.1425 | |
| 172 | H | H | 0.0000 | |
| 173 | T | H | 0.1011 | |
| 174 | F | H | 0.0000 | |
| 175 | P | H | -0.3718 | |
| 176 | A | H | -0.1318 | |
| 177 | V | H | 0.1569 | |
| 178 | L | H | 0.7354 | |
| 179 | Q | H | 0.1076 | |
| 180 | S | H | -0.1275 | |
| 181 | S | H | -0.2669 | |
| 182 | G | H | -0.0736 | |
| 183 | L | H | -0.1475 | |
| 184 | Y | H | 0.0000 | |
| 185 | S | H | 0.0000 | |
| 186 | L | H | 0.0000 | |
| 187 | S | H | 0.0000 | |
| 188 | S | H | 0.0000 | |
| 189 | V | H | 0.0000 | |
| 190 | V | H | 0.0000 | |
| 191 | T | H | -0.1390 | |
| 192 | V | H | 0.0000 | |
| 193 | P | H | -0.6159 | |
| 194 | S | H | -0.5883 | |
| 195 | S | H | -0.6460 | |
| 196 | S | H | -0.6644 | |
| 197 | L | H | -0.8455 | |
| 198 | G | H | -0.9821 | |
| 199 | T | H | -0.6994 | |
| 200 | Q | H | -1.2022 | |
| 201 | T | H | -1.0849 | |
| 202 | Y | H | 0.0000 | |
| 203 | I | H | -1.1821 | |
| 204 | C | H | 0.0000 | |
| 205 | N | H | 0.0000 | |
| 206 | V | H | 0.0000 | |
| 207 | N | H | -1.7766 | |
| 208 | H | H | 0.0000 | |
| 209 | K | H | -2.8185 | |
| 210 | P | H | -1.7947 | |
| 211 | S | H | -1.8352 | |
| 212 | N | H | -2.5840 | |
| 213 | T | H | -2.0181 | |
| 214 | K | H | -2.5476 | |
| 215 | V | H | -1.4404 | |
| 216 | D | H | -2.3662 | |
| 217 | K | H | -2.0189 | |
| 218 | K | H | -2.3528 | |
| 219 | V | H | 0.0000 | |
| 220 | E | H | -2.8927 | |
| 221 | P | H | -2.0143 | |
| 222 | K | H | -2.4127 | |
| 223 | S | H | -1.3165 |