Project name: 5WK2

Status: done

Started: 2026-03-23 04:50:51
Settings
Chain sequence(s) H: EVQLVQSGAEVKKPGESLKISCKGSGYSFTSYWIGWVRQMPGKGLEWMGIIDPSDSDTRYSPSFQGQVTISADKSISTAYLQWSSLKASDTAMYYCARVGPADVWDSFDYWGQGTLVTVSSSASTKGPSVFPLAPSGTAALGCCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS
L: DIVMTQSPDSLAVSLGERATINCKSSQSVLLSPWNSSNQLAWYQQKPGQPPKLLIYGASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYLIPPSSTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACCEVTHQGLSSPVTKSFNRGE
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:03:44)
[INFO]       Main:     Simulation completed successfully.                                          (00:03:47)
Show buried residues

Minimal score value
-3.6878
Maximal score value
1.0649
Average score
-0.6673
Total score value
-290.9405

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 D L -1.3921
2 I L 0.0000
3 V L 0.8398
4 M L 0.0000
5 T L -0.5948
6 Q L 0.0000
7 S L -1.2528
8 P L -1.2613
9 D L -2.3354
10 S L -1.3596
11 L L -0.7306
12 A L -0.5762
13 V L 0.0000
14 S L -1.3544
15 L L -0.3827
16 G L -1.2957
17 E L -2.8715
18 R L -2.8102
19 A L 0.0000
20 T L -0.5740
21 I L 0.0000
22 N L -1.0485
23 C L 0.0000
24 K L -1.6674
25 S L 0.0000
26 S L -0.8751
27 Q L -1.4870
28 S L -0.8757
29 V L 0.0000
30 L L 0.0375
31 L L 0.2818
32 S L -0.2763
33 P L -0.1822
34 W L 0.3706
35 N L -0.8289
36 S L -0.2891
37 N L -0.1462
38 Q L 0.0000
39 L L 0.0000
40 A L 0.0000
41 W L 0.0000
42 Y L 0.0000
43 Q L 0.0000
44 Q L 0.0000
45 K L -1.7768
46 P L -1.3700
47 G L -1.4743
48 Q L -2.1373
49 P L -1.4401
50 P L 0.0000
51 K L -1.5929
52 L L 0.0000
53 L L 0.0000
54 I L 0.0000
55 Y L 0.0179
56 G L -0.3082
57 A L 0.0000
58 S L -0.6211
59 T L -0.6021
60 R L -1.4847
61 E L -1.1973
62 S L -0.8768
63 G L -1.0566
64 V L 0.0000
65 P L -1.4040
66 D L -2.2047
67 R L -1.5002
68 F L 0.0000
69 S L -0.8877
70 G L -0.5176
71 S L -0.7358
72 G L -1.1013
73 S L -1.0423
74 G L -0.9937
75 T L -1.4202
76 D L -1.9142
77 F L 0.0000
78 T L -0.7623
79 L L 0.0000
80 T L -0.6085
81 I L 0.0000
82 S L -1.7339
83 S L -1.7377
84 L L 0.0000
85 Q L -1.1686
86 A L -0.7054
87 E L -1.8902
88 D L 0.0000
89 V L -0.4196
90 A L 0.0000
91 V L 0.0000
92 Y L 0.0000
93 Y L 0.0000
94 C L 0.0000
95 Q L 0.0000
96 Q L 0.0000
97 Y L 0.0000
98 Y L 0.9240
99 L L 0.8680
100 I L 0.5530
101 P L 0.0733
102 S L 0.0000
103 T L 0.2033
104 F L 0.1116
105 G L 0.0000
106 Q L -1.4073
107 G L 0.0000
108 T L 0.0000
109 K L -1.6336
110 V L 0.0000
111 E L 0.0000
112 I L -0.5020
113 K L -1.6514
114 R L -0.9583
115 T L 0.1011
116 V L 1.0649
117 A L 0.4588
118 A L 0.0545
119 P L 0.0000
120 S L -0.0789
121 V L 0.0386
122 F L 0.1064
123 I L 0.0000
124 F L 0.0000
125 P L -0.5386
126 P L 0.0000
127 S L -1.9008
128 D L -3.0273
129 E L -3.1374
130 Q L 0.0000
131 L L -2.3694
132 K L -2.8911
133 S L -1.7823
134 G L -1.4185
135 T L -1.0821
136 A L 0.0000
137 S L 0.0000
138 V L 0.0000
139 V L 0.0000
140 C L 0.0000
141 L L 0.0000
142 L L 0.0000
143 N L 0.0000
144 N L -0.7666
145 F L 0.0000
146 Y L 0.0000
147 P L -1.1732
148 R L -2.0418
149 E L -2.7840
150 A L -2.1034
151 K L -2.2328
152 V L -1.1445
153 Q L -0.6321
154 W L 0.0000
155 K L -0.4857
156 V L 0.0000
157 D L -1.7304
158 N L -1.3022
159 A L -0.2228
160 L L 0.7449
161 Q L -0.1312
162 S L -0.4120
163 G L -0.9675
164 N L -0.9505
165 S L -1.2157
166 Q L -1.4900
167 E L -1.9428
168 S L -0.9573
169 V L -0.4996
170 T L -0.9646
171 E L -2.0825
172 Q L -1.6664
173 D L -1.8511
174 S L -1.6833
175 K L -2.2671
176 D L -1.6766
177 S L -1.7045
178 T L 0.0000
179 Y L 0.0000
180 S L 0.0000
181 L L 0.0000
182 S L 0.0000
183 S L 0.0000
184 T L -0.7104
185 L L 0.0000
186 T L -0.4953
187 L L -0.7764
188 S L -1.1903
189 K L -2.2024
190 A L -2.0594
191 D L -2.9576
192 Y L 0.0000
193 E L -3.5751
194 K L -3.6878
195 H L -2.8213
196 K L -2.4387
197 V L -0.8079
198 Y L 0.0000
199 A L -0.6766
200 C L 0.0000
201 E L -0.9219
202 V L 0.0000
203 T L -1.2810
204 H L 0.0000
205 Q L -1.3802
206 G L -0.2475
207 L L -0.1633
208 S L -0.4577
209 S L -0.4637
210 P L -0.6584
211 V L -0.0833
212 T L -0.5109
213 K L -0.7006
214 S L -0.4642
215 F L -0.6975
216 N L -1.4735
217 R L -2.1149
218 G L -1.9481
219 E L -2.3746
1 E H -2.1748
2 V H -1.2578
3 Q H -1.5092
4 L H 0.0000
5 V H 0.3480
6 Q H 0.0000
7 S H -0.4570
8 G H -0.3118
9 A H 0.1177
10 E H -0.0698
11 V H 0.7839
12 K H -0.7783
13 K H -1.8034
14 P H -1.9923
15 G H -1.9102
16 E H -2.0879
17 S H -1.7415
18 L H 0.0000
19 K H -2.0024
20 I H 0.0000
21 S H -0.5226
22 C H 0.0000
23 K H -0.6219
24 G H 0.0000
25 S H -0.7508
26 G H -1.2873
27 Y H -0.5724
28 S H -0.3823
29 F H 0.0000
30 T H -0.9579
31 S H -0.1845
32 Y H 0.1030
33 W H 0.0142
34 I H 0.0000
35 G H 0.0000
36 W H 0.0000
37 V H 0.0000
38 R H -0.6018
39 Q H -0.8177
40 M H -0.7502
41 P H -0.8961
42 G H -1.4091
43 K H -2.2581
44 G H -1.4661
45 L H 0.0000
46 E H -1.0319
47 W H 0.0000
48 M H 0.0000
49 G H 0.0000
50 I H 0.0000
51 I H 0.0000
52 D H -1.2270
53 P H 0.0000
54 S H -1.7047
55 D H -2.5149
56 S H -1.8808
57 D H -1.4907
58 T H -0.9169
59 R H -0.8165
60 Y H -0.5473
61 S H 0.0000
62 P H -0.9407
63 S H -0.8949
64 F H 0.0000
65 Q H -1.8601
66 G H -1.5040
67 Q H -1.6261
68 V H 0.0000
69 T H -0.8702
70 I H 0.0000
71 S H -0.7671
72 A H -1.1672
73 D H -1.5378
74 K H -2.0783
75 S H -0.4434
76 I H 0.7409
77 S H -0.3938
78 T H 0.0000
79 A H 0.0000
80 Y H -0.6625
81 L H 0.0000
82 Q H -1.3643
83 W H 0.0000
84 S H -1.1128
85 S H -1.5352
86 L H 0.0000
87 K H -2.3477
88 A H -1.2321
89 S H -0.7620
90 D H 0.0000
91 T H -0.1740
92 A H 0.0000
93 M H 0.2113
94 Y H 0.0000
95 Y H 0.0000
96 C H 0.0000
97 A H 0.0000
98 R H 0.0000
99 V H 0.0000
100 G H 0.0000
101 P H -0.5532
102 A H -0.6766
103 D H -1.3899
104 V H 0.2041
105 W H 0.3299
106 D H -0.1064
107 S H 0.0000
108 F H 0.0000
109 D H -0.3258
110 Y H -0.1938
111 W H -0.2542
112 G H 0.0000
113 Q H -1.1026
114 G H -0.5101
115 T H 0.0000
116 L H 0.5188
117 V H 0.0000
118 T H 0.0164
119 V H 0.0000
120 S H -0.7009
121 S H -0.7858
122 A H -0.4417
123 S H -0.5126
124 T H -0.5821
125 K H -1.2145
126 G H -1.3310
127 P H 0.0000
128 S H -0.3974
129 V H 0.0000
130 F H 0.0000
131 P H -1.3066
132 L H 0.0000
133 A H -1.2740
134 P H 0.0000
135 S H -0.6986
142 G H -0.6727
143 T H -0.4976
144 A H -0.2543
145 A H 0.0000
146 L H 0.0000
147 G H 0.0000
148 C H 0.0000
149 L H 0.0000
150 V H 0.0000
151 K H 0.0000
152 D H -0.4616
153 Y H 0.0000
154 F H 0.0000
155 P H -0.6971
156 E H -1.1238
157 P H -1.1829
158 V H -0.8923
159 T H -0.5651
160 V H -0.2409
161 S H -0.3176
162 W H 0.0000
163 N H -0.7036
164 S H -0.6326
165 G H -0.5573
166 A H -0.2523
167 L H -0.0373
168 T H -0.1907
169 S H -0.4046
170 G H -0.4864
171 V H 0.1425
172 H H 0.0000
173 T H 0.1011
174 F H 0.0000
175 P H -0.3718
176 A H -0.1318
177 V H 0.1569
178 L H 0.7354
179 Q H 0.1076
180 S H -0.1275
181 S H -0.2669
182 G H -0.0736
183 L H -0.1475
184 Y H 0.0000
185 S H 0.0000
186 L H 0.0000
187 S H 0.0000
188 S H 0.0000
189 V H 0.0000
190 V H 0.0000
191 T H -0.1390
192 V H 0.0000
193 P H -0.6159
194 S H -0.5883
195 S H -0.6460
196 S H -0.6644
197 L H -0.8455
198 G H -0.9821
199 T H -0.6994
200 Q H -1.2022
201 T H -1.0849
202 Y H 0.0000
203 I H -1.1821
204 C H 0.0000
205 N H 0.0000
206 V H 0.0000
207 N H -1.7766
208 H H 0.0000
209 K H -2.8185
210 P H -1.7947
211 S H -1.8352
212 N H -2.5840
213 T H -2.0181
214 K H -2.5476
215 V H -1.4404
216 D H -2.3662
217 K H -2.0189
218 K H -2.3528
219 V H 0.0000
220 E H -2.8927
221 P H -2.0143
222 K H -2.4127
223 S H -1.3165
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Laboratory of Theory of Biopolymers 2018