| Chain sequence(s) |
A: MSYNCCSRNFSSRSCGGYLHYPASSCGFSYPSNLVYSTDLCSPSTCQLGSSLYRGCQEQTSCYRPRTSLLCSPCQTTYSGSLGFGSSSCRSLGYGSRSCYVGCGSSG
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:32)
[INFO] Main: Simulation completed successfully. (00:00:33)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 1.1361 | |
| 2 | S | A | 0.6417 | |
| 3 | Y | A | 1.2659 | |
| 4 | N | A | -0.0137 | |
| 5 | C | A | 0.8492 | |
| 6 | C | A | 0.2826 | |
| 7 | S | A | -0.9903 | |
| 8 | R | A | -2.2301 | |
| 9 | N | A | -1.5189 | |
| 10 | F | A | 0.9602 | |
| 11 | S | A | -0.0136 | |
| 12 | S | A | -0.3405 | |
| 13 | R | A | -1.5456 | |
| 14 | S | A | -0.3268 | |
| 15 | C | A | 0.3344 | |
| 16 | G | A | -0.1277 | |
| 17 | G | A | 0.2806 | |
| 18 | Y | A | 1.3445 | |
| 19 | L | A | 1.0877 | |
| 20 | H | A | 0.6665 | |
| 21 | Y | A | 1.3526 | |
| 22 | P | A | 0.5451 | |
| 23 | A | A | 0.1227 | |
| 24 | S | A | 0.3847 | |
| 25 | S | A | 0.4217 | |
| 26 | C | A | 0.7727 | |
| 27 | G | A | 0.8564 | |
| 28 | F | A | 2.0097 | |
| 29 | S | A | 1.3208 | |
| 30 | Y | A | 1.4320 | |
| 31 | P | A | 0.6487 | |
| 32 | S | A | -0.1728 | |
| 33 | N | A | -0.4487 | |
| 34 | L | A | 0.9727 | |
| 35 | V | A | 1.0478 | |
| 36 | Y | A | 1.3032 | |
| 37 | S | A | 0.6449 | |
| 38 | T | A | 0.1518 | |
| 39 | D | A | -0.5866 | |
| 40 | L | A | 1.1775 | |
| 41 | C | A | 0.7843 | |
| 42 | S | A | -0.3346 | |
| 43 | P | A | -0.0960 | |
| 44 | S | A | -0.2624 | |
| 45 | T | A | -0.5763 | |
| 46 | C | A | 0.0425 | |
| 47 | Q | A | -0.7400 | |
| 48 | L | A | 0.0201 | |
| 49 | G | A | 0.0028 | |
| 50 | S | A | 0.1387 | |
| 51 | S | A | 0.6401 | |
| 52 | L | A | 1.5796 | |
| 53 | Y | A | 1.0693 | |
| 54 | R | A | -0.8824 | |
| 55 | G | A | -0.6644 | |
| 56 | C | A | -0.8906 | |
| 57 | Q | A | -2.4144 | |
| 58 | E | A | -2.6423 | |
| 59 | Q | A | -2.0200 | |
| 60 | T | A | -1.1023 | |
| 61 | S | A | -0.4965 | |
| 62 | C | A | -0.0107 | |
| 63 | Y | A | -0.1592 | |
| 64 | R | A | -1.7456 | |
| 65 | P | A | -1.4984 | |
| 66 | R | A | -2.0955 | |
| 67 | T | A | -0.6632 | |
| 68 | S | A | 0.5946 | |
| 69 | L | A | 2.1244 | |
| 70 | L | A | 2.4952 | |
| 71 | C | A | 1.5336 | |
| 72 | S | A | 0.7785 | |
| 73 | P | A | 0.2531 | |
| 74 | C | A | 0.3747 | |
| 75 | Q | A | -0.4839 | |
| 76 | T | A | 0.0365 | |
| 77 | T | A | -0.0666 | |
| 78 | Y | A | 0.0393 | |
| 79 | S | A | -0.4371 | |
| 80 | G | A | -0.6378 | |
| 81 | S | A | 0.0486 | |
| 82 | L | A | 0.8957 | |
| 83 | G | A | 1.0185 | |
| 84 | F | A | 1.8462 | |
| 85 | G | A | 0.4892 | |
| 86 | S | A | -0.2592 | |
| 87 | S | A | -0.3690 | |
| 88 | S | A | 0.1421 | |
| 89 | C | A | -0.1698 | |
| 90 | R | A | -1.4728 | |
| 91 | S | A | 0.0000 | |
| 92 | L | A | 0.1736 | |
| 93 | G | A | -0.5145 | |
| 94 | Y | A | -0.4510 | |
| 95 | G | A | -0.6710 | |
| 96 | S | A | -1.5245 | |
| 97 | R | A | -1.6577 | |
| 98 | S | A | -0.5390 | |
| 99 | C | A | 0.7575 | |
| 100 | Y | A | 1.4007 | |
| 101 | V | A | 0.5031 | |
| 102 | G | A | 0.0000 | |
| 103 | C | A | 0.0711 | |
| 104 | G | A | -0.1298 | |
| 105 | S | A | -0.2876 | |
| 106 | S | A | -0.7983 | |
| 107 | G | A | -0.6703 |