Project name: parental_tigit

Status: done

Started: 2026-03-31 14:38:34
Settings
Chain sequence(s) H: QVQLVESGGGVVQPGESLKISCAASGFTFSSYGMHWVRQAPGKGLEWVSAISGSGGTAFYADSVKDRFTISRDNRKNSLYLQMNELRAEDTAVYYCARSTYYYDSSGYDYYFDPWGPGTLVTVSS
L: DIQMTQSPSSLSASVGDRVTITCRASQHIRSSLAWYQQKPGKAPKLLIYGASSRATGIPDRFSGSGSGTDFTLTISSLQPEDFATYYCQHTYITPYTFGQGTKVEIK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage No
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       runJob:   FoldX not utilized. Treating input pdb file as it was already optimized.    (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:01)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:02)
Show buried residues

Minimal score value
-3.4339
Maximal score value
2.0169
Average score
-0.6358
Total score value
-147.499

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
0 Q H -1.2684
1 V H -0.6401
2 Q H -0.6363
3 L H 0.0000
4 V H 1.3494
5 E H 0.0000
6 S H -0.1301
7 G H -0.7597
8 G H 0.1536
9 G H 0.9353
10 V H 1.5562
11 V H 0.0000
12 Q H -1.9684
13 P H -2.4324
14 G H -2.7612
15 E H -2.7181
16 S H -2.0173
17 L H -1.1901
18 K H -1.9275
19 I H 0.0000
20 S H -0.3248
21 C H 0.0000
22 A H 0.0189
23 A H 0.0000
24 S H -0.5216
25 G H -0.8179
26 F H -0.2568
27 T H -0.1743
28 F H 0.0000
29 S H -0.8973
30 S H -0.1885
31 Y H 0.1585
32 G H -0.1093
33 M H 0.0000
34 H H 0.0000
35 W H 0.0000
36 V H 0.0000
37 R H 0.0000
38 Q H -0.7130
39 A H -1.0439
40 P H -0.9821
41 G H -1.5032
42 K H -2.3861
43 G H -1.6196
44 L H 0.0000
45 E H -1.2016
46 W H 0.0000
47 V H 0.0000
48 S H 0.0000
49 A H 0.0000
50 I H 0.0000
51 S H -0.2281
52 G H -0.5053
53 S H -0.7392
54 G H -0.8586
55 G H -0.7282
56 T H -0.0993
57 A H 0.5960
58 F H 1.1995
59 Y H -0.2830
60 A H 0.0000
61 D H -2.4736
62 S H -1.7306
63 V H 0.0000
64 K H -2.9872
65 D H -3.2337
66 R H -2.3061
67 F H 0.0000
68 T H -0.8185
69 I H 0.0000
70 S H -0.4056
71 R H -1.2990
72 D H -2.1448
73 N H -2.6142
74 R H -3.2764
75 K H -3.2178
76 N H -2.3706
77 S H -1.2950
78 L H 0.0000
79 Y H -0.4495
80 L H 0.0000
81 Q H -1.1051
82 M H 0.0000
83 N H -2.6668
84 E H -3.4339
85 L H 0.0000
86 R H -3.1680
87 A H -1.9287
88 E H -2.3273
89 D H 0.0000
90 T H -0.4207
91 A H 0.0000
92 V H 0.8984
93 Y H 0.0000
94 Y H 0.0000
95 C H 0.0000
96 A H 0.0000
97 R H -0.3960
98 S H 0.0000
99 T H 0.3739
100 Y H 1.7047
101 Y H 1.9321
102 Y H 1.2217
103 D H -0.7912
104 S H -0.8365
105 S H -0.5454
106 G H -0.1167
107 Y H 1.5297
108 D H 1.2759
109 Y H 1.6372
110 Y H 0.4438
111 F H 0.0000
112 D H -1.0461
113 P H -0.8439
114 W H -0.5816
115 G H 0.0000
116 P H -0.3630
117 G H 0.1845
118 T H 0.7500
119 L H 1.7413
120 V H 0.0000
121 T H 0.3740
122 V H 0.0000
123 S H -0.6606
124 S H -0.5978
125 D L -1.9889
126 I L 0.0000
127 Q L -2.1779
128 M L 0.0000
129 T L -1.2799
130 Q L 0.0000
131 S L -0.7297
132 P L -0.5967
133 S L -0.9557
134 S L -1.1317
135 L L -0.6512
136 S L -0.7034
137 A L 0.0000
138 S L -0.1501
139 V L 0.7144
140 G L -0.7123
141 D L -1.6735
142 R L -2.3452
143 V L 0.0000
144 T L -0.6347
145 I L 0.0000
146 T L -0.9495
147 C L 0.0000
148 R L -3.0424
149 A L 0.0000
150 S L -2.2535
151 Q L -2.8575
152 H L -2.5604
153 I L 0.0000
154 R L -2.5871
155 S L -1.4374
156 S L -0.3678
157 L L 0.0000
158 A L 0.0000
159 W L 0.0000
160 Y L 0.0000
161 Q L -1.1042
162 Q L -1.7143
163 K L -2.2366
164 P L -1.4905
165 G L -1.6715
166 K L -2.5823
167 A L -1.6197
168 P L 0.0000
169 K L -2.2420
170 L L 0.0000
171 L L 0.0000
172 I L 0.0000
173 Y L 0.0271
174 G L -0.7086
175 A L 0.0000
176 S L -0.7533
177 S L -0.7827
178 R L -1.6404
179 A L -0.9637
180 T L -0.6066
181 G L -0.9206
182 I L 0.0000
183 P L -1.3916
184 D L -2.3108
185 R L -1.6226
186 F L 0.0000
187 S L -1.0311
188 G L -0.5712
189 S L -0.8410
190 G L -1.4468
191 S L -1.8385
192 G L -2.4368
193 T L -2.6686
194 D L -3.1641
195 F L 0.0000
196 T L -0.9106
197 L L 0.0000
198 T L -0.6128
199 I L 0.0000
200 S L -1.6868
201 S L -1.2948
202 L L 0.0000
203 Q L -0.7790
204 P L -0.6486
205 E L -1.8860
206 D L 0.0000
207 F L -0.5811
208 A L 0.0000
209 T L -1.2844
210 Y L 0.0000
211 Y L 0.0000
212 C L 0.0000
213 Q L 0.0000
214 H L 0.0000
215 T L 1.2383
216 Y L 1.5259
217 I L 2.0169
218 T L 0.9220
219 P L 0.0355
220 Y L 0.2395
221 T L -0.3931
222 F L -0.4480
223 G L 0.0000
224 Q L -1.5876
225 G L 0.0000
226 T L 0.0000
227 K L -2.1542
228 V L 0.0000
229 E L -0.9090
230 I L 0.9381
231 K L -0.7855
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Laboratory of Theory of Biopolymers 2018