| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFRDIVKNGKVVVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGSVGHPLFNKLGDTENPTEPQHDTADVRVAFSFDPKQTQLFIVGCEPPTGEHWDLAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFHVRAGPDGHPLPADPPPSPLYVPPPPSSPYATLPPTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLCTPAPNVYDPSCFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:06)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9484 | |
| 2 | L | A | 1.9720 | |
| 3 | P | A | 0.6540 | |
| 4 | P | A | 0.3545 | |
| 5 | T | A | 0.1104 | |
| 6 | T | A | 0.1280 | |
| 7 | P | A | 0.1519 | |
| 8 | V | A | 1.2142 | |
| 9 | A | A | 0.0194 | |
| 10 | K | A | -1.1473 | |
| 11 | V | A | -0.3855 | |
| 12 | Q | A | -1.5183 | |
| 13 | S | A | -1.6066 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4351 | |
| 16 | E | A | -2.4464 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4546 | |
| 20 | P | A | 0.1042 | |
| 21 | T | A | 0.1160 | |
| 22 | S | A | -0.1710 | |
| 23 | L | A | 0.0000 | |
| 24 | F | A | -0.1030 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.2721 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.8664 | |
| 31 | R | A | -2.6662 | |
| 32 | L | A | -0.7998 | |
| 33 | L | A | 1.0847 | |
| 34 | T | A | 1.4516 | |
| 35 | V | A | 1.7130 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | 0.0000 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6757 | |
| 40 | R | A | -1.6778 | |
| 41 | D | A | -0.9147 | |
| 42 | I | A | 0.8219 | |
| 43 | V | A | 1.0045 | |
| 44 | K | A | -1.1922 | |
| 45 | N | A | -1.9268 | |
| 46 | G | A | -1.2326 | |
| 47 | K | A | -0.9432 | |
| 48 | V | A | 1.4970 | |
| 49 | V | A | 2.0608 | |
| 50 | V | A | 1.2871 | |
| 51 | P | A | 0.4698 | |
| 52 | K | A | -0.6279 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1179 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4912 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2697 | |
| 70 | K | A | -1.8126 | |
| 71 | F | A | -0.6679 | |
| 72 | A | A | -0.5795 | |
| 73 | L | A | -0.8705 | |
| 74 | P | A | -1.2612 | |
| 75 | Q | A | -2.4756 | |
| 76 | K | A | -3.0952 | |
| 77 | D | A | -2.9941 | |
| 78 | F | A | -1.6422 | |
| 79 | Y | A | -1.9361 | |
| 80 | D | A | -2.7783 | |
| 81 | P | A | -2.4237 | |
| 82 | E | A | -3.0803 | |
| 83 | K | A | -3.4458 | |
| 84 | E | A | -2.5121 | |
| 85 | R | A | -1.3217 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6433 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9634 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3382 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.7687 | |
| 99 | G | A | -0.5698 | |
| 100 | P | A | -0.4133 | |
| 101 | L | A | -0.0087 | |
| 102 | G | A | -0.2227 | |
| 103 | K | A | -0.6718 | |
| 104 | G | A | -0.5192 | |
| 105 | S | A | -0.5678 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.0706 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.3868 | |
| 110 | L | A | 0.3333 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -0.9478 | |
| 113 | K | A | -0.2429 | |
| 114 | L | A | -1.0009 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.5691 | |
| 117 | T | A | -1.4489 | |
| 118 | E | A | -2.6507 | |
| 119 | N | A | -2.5955 | |
| 120 | P | A | -2.1849 | |
| 121 | T | A | -1.7310 | |
| 122 | E | A | -2.4296 | |
| 123 | P | A | -1.2378 | |
| 124 | Q | A | -1.5639 | |
| 125 | H | A | -1.9012 | |
| 126 | D | A | -2.4207 | |
| 127 | T | A | -1.5986 | |
| 128 | A | A | -1.3459 | |
| 129 | D | A | -2.0171 | |
| 130 | V | A | -1.2834 | |
| 131 | R | A | -0.7492 | |
| 132 | V | A | 0.4296 | |
| 133 | A | A | 0.4534 | |
| 134 | F | A | 0.3006 | |
| 135 | S | A | -0.1065 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.7536 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5635 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2481 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1279 | |
| 157 | D | A | 0.3151 | |
| 158 | L | A | 0.8381 | |
| 159 | A | A | 0.1801 | |
| 160 | E | A | -1.4396 | |
| 161 | P | A | -0.2100 | |
| 162 | C | A | 0.1838 | |
| 163 | P | A | -0.1656 | |
| 164 | G | A | -0.0721 | |
| 165 | L | A | 0.5908 | |
| 166 | P | A | -0.1119 | |
| 167 | P | A | -0.3399 | |
| 168 | G | A | -0.4157 | |
| 169 | A | A | -0.0151 | |
| 170 | C | A | 0.6623 | |
| 171 | P | A | 0.5277 | |
| 172 | P | A | 0.7760 | |
| 173 | I | A | 1.9603 | |
| 174 | Q | A | 0.8206 | |
| 175 | L | A | 1.4689 | |
| 176 | V | A | 0.8258 | |
| 177 | N | A | -0.3428 | |
| 178 | S | A | 0.0158 | |
| 179 | V | A | 0.4077 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3754 | |
| 182 | D | A | 0.0843 | |
| 183 | G | A | -0.1562 | |
| 184 | D | A | -0.5851 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | -0.4769 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1034 | |
| 190 | F | A | 0.0162 | |
| 191 | G | A | -0.1604 | |
| 192 | N | A | -0.3414 | |
| 193 | M | A | -0.1795 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.4393 | |
| 197 | E | A | -2.6367 | |
| 198 | L | A | -1.2446 | |
| 199 | Q | A | -2.5596 | |
| 200 | Q | A | -3.3522 | |
| 201 | D | A | -3.6099 | |
| 202 | R | A | -3.3805 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.0015 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.4513 | |
| 211 | S | A | -1.9572 | |
| 212 | T | A | -1.5121 | |
| 213 | R | A | -2.2059 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.2212 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.2933 | |
| 220 | L | A | 0.4974 | |
| 221 | K | A | -1.3182 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.9656 | |
| 224 | N | A | -1.5836 | |
| 225 | E | A | -1.3334 | |
| 226 | A | A | -0.6757 | |
| 227 | Y | A | -0.4522 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.7091 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | -0.1401 | |
| 234 | F | A | 0.0312 | |
| 235 | G | A | -0.9322 | |
| 236 | R | A | -2.7047 | |
| 237 | R | A | -3.0121 | |
| 238 | E | A | -2.1504 | |
| 239 | Q | A | -0.1294 | |
| 240 | V | A | 1.5861 | |
| 241 | Y | A | 1.2532 | |
| 242 | A | A | 0.1724 | |
| 243 | R | A | -1.3187 | |
| 244 | H | A | -1.1884 | |
| 245 | F | A | -0.1835 | |
| 246 | H | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | R | A | -0.8162 | |
| 249 | A | A | -1.3120 | |
| 250 | G | A | -1.2198 | |
| 251 | P | A | -1.2054 | |
| 252 | D | A | -1.3391 | |
| 253 | G | A | -1.3037 | |
| 254 | H | A | -1.4580 | |
| 255 | P | A | -0.8608 | |
| 256 | L | A | 0.2444 | |
| 257 | P | A | -0.2297 | |
| 258 | A | A | -0.3201 | |
| 259 | D | A | -0.9914 | |
| 260 | P | A | -0.8129 | |
| 261 | P | A | -0.2823 | |
| 262 | P | A | -0.1357 | |
| 263 | S | A | 0.0000 | |
| 264 | P | A | 0.5547 | |
| 265 | L | A | 1.7635 | |
| 266 | Y | A | 1.6217 | |
| 267 | V | A | 1.7925 | |
| 268 | P | A | 0.8286 | |
| 269 | P | A | 0.4191 | |
| 270 | P | A | -0.1700 | |
| 271 | P | A | -0.3880 | |
| 272 | S | A | -0.3277 | |
| 273 | S | A | -0.0687 | |
| 274 | P | A | -0.1684 | |
| 275 | Y | A | 0.7721 | |
| 276 | A | A | 0.3665 | |
| 277 | T | A | 0.3670 | |
| 278 | L | A | 0.6591 | |
| 279 | P | A | -0.3770 | |
| 280 | P | A | -0.8317 | |
| 281 | T | A | -0.4791 | |
| 282 | D | A | -1.0836 | |
| 283 | Y | A | 0.7868 | |
| 284 | F | A | 0.6733 | |
| 285 | G | A | 0.1328 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9644 | |
| 291 | L | A | 1.6668 | |
| 292 | V | A | 0.6659 | |
| 293 | S | A | -0.1748 | |
| 294 | S | A | -1.0070 | |
| 295 | D | A | -1.8756 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | -1.0718 | |
| 298 | L | A | -1.2061 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6641 | |
| 301 | R | A | -1.8971 | |
| 302 | P | A | -0.9688 | |
| 303 | F | A | -0.1779 | |
| 304 | W | A | -0.5130 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0811 | |
| 307 | R | A | -2.9290 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.6609 | |
| 310 | G | A | -1.4294 | |
| 311 | N | A | -1.3997 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.9797 | |
| 319 | N | A | -0.9012 | |
| 320 | E | A | -1.0577 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3926 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.1405 | |
| 333 | N | A | 0.4930 | |
| 334 | F | A | 1.7153 | |
| 335 | T | A | 0.8898 | |
| 336 | I | A | 0.5017 | |
| 337 | S | A | -0.8191 | |
| 338 | Q | A | -1.4989 | |
| 339 | Q | A | -0.8765 | |
| 340 | L | A | 0.7960 | |
| 341 | C | A | 0.4392 | |
| 342 | T | A | 0.1550 | |
| 343 | P | A | -0.2769 | |
| 344 | A | A | 0.1771 | |
| 345 | P | A | 0.1518 | |
| 346 | N | A | -0.2793 | |
| 347 | V | A | 1.5516 | |
| 348 | Y | A | 1.4615 | |
| 349 | D | A | 0.0699 | |
| 350 | P | A | -0.3345 | |
| 351 | S | A | -0.2650 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -0.5326 | |
| 354 | K | A | -1.6707 | |
| 355 | N | A | -1.6896 | |
| 356 | Y | A | -0.0281 | |
| 357 | L | A | 0.6841 | |
| 358 | R | A | 0.9471 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.1417 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.1983 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -1.9359 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6577 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.2838 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3284 | |
| 376 | L | A | -1.7543 | |
| 377 | D | A | -2.0286 | |
| 378 | P | A | -1.0593 | |
| 379 | G | A | -1.0201 | |
| 380 | V | A | -0.9307 | |
| 381 | L | A | -0.5388 | |
| 382 | A | A | -0.6591 | |
| 383 | H | A | -0.8457 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4080 | |
| 386 | T | A | -0.5690 | |
| 387 | M | A | -0.3322 | |
| 388 | N | A | -0.8740 | |
| 389 | P | A | -1.3032 | |
| 390 | T | A | -1.6548 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.6103 | |
| 393 | E | A | -3.0732 | |
| 394 | N | A | -2.9225 | |
| 395 | W | A | -1.6381 | |
| 396 | N | A | -1.2728 | |
| 397 | L | A | -0.2342 | |
| 398 | G | A | 0.4953 | |
| 399 | F | A | 2.4156 | |
| 400 | V | A | 1.8471 | |
| 401 | P | A | 0.0499 | |
| 402 | P | A | -2.0554 | |
| 403 | K | A | -3.5941 | |
| 404 | E | A | -4.1582 | |
| 405 | R | A | -4.7632 | |
| 406 | E | A | -4.1623 | |
| 407 | D | A | -3.0348 | |
| 408 | P | A | -1.8588 | |
| 409 | Y | A | -0.9814 | |
| 410 | K | A | -2.1013 | |
| 411 | G | A | -0.6308 | |
| 412 | L | A | 0.6652 | |
| 413 | I | A | 1.5838 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3796 | |
| 416 | E | A | -1.6312 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9258 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0702 | |
| 421 | E | A | -2.7990 | |
| 422 | R | A | -2.6674 | |
| 423 | F | A | -1.3102 | |
| 424 | S | A | -1.4642 | |
| 425 | Q | A | -1.9000 | |
| 426 | D | A | -2.9029 | |
| 427 | L | A | -2.0273 | |
| 428 | D | A | -2.8462 | |
| 429 | Q | A | -2.6412 | |
| 430 | F | A | -1.4662 | |
| 431 | A | A | -0.9102 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.6585 | |
| 435 | K | A | -0.7886 | |
| 436 | F | A | 0.1131 | |
| 437 | L | A | 0.9989 | |
| 438 | Y | A | 0.7975 | |
| 439 | Q | A | -0.2850 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine