| Chain sequence(s) |
A: LPAPKNLVVSRVTEDSARLSWHATFGDPFDSFLIQYQESEKVGEAIVLTVPGSERSYDLTGLKPGTEYTVSIYGVGRHYTVYDSNPLSAIFTT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:03)
[INFO] Main: Simulation completed successfully. (00:01:04)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | L | A | 1.0592 | |
| 2 | P | A | 0.0485 | |
| 3 | A | A | -0.7226 | |
| 4 | P | A | 0.0000 | |
| 5 | K | A | -2.0321 | |
| 6 | N | A | -1.6417 | |
| 7 | L | A | -0.2944 | |
| 8 | V | A | 1.1339 | |
| 9 | V | A | 0.6863 | |
| 10 | S | A | -0.5924 | |
| 11 | R | A | -1.9839 | |
| 12 | V | A | -0.9691 | |
| 13 | T | A | -1.7458 | |
| 14 | E | A | -2.9975 | |
| 15 | D | A | -2.6630 | |
| 16 | S | A | -2.0392 | |
| 17 | A | A | 0.0000 | |
| 18 | R | A | -1.1929 | |
| 19 | L | A | 0.0000 | |
| 20 | S | A | -0.5568 | |
| 21 | W | A | 0.0000 | |
| 22 | H | A | -1.5786 | |
| 23 | A | A | 0.0000 | |
| 24 | T | A | 0.2110 | |
| 25 | F | A | 1.4324 | |
| 26 | G | A | 0.2170 | |
| 27 | D | A | -0.2802 | |
| 28 | P | A | -1.2252 | |
| 29 | F | A | 0.0000 | |
| 30 | D | A | -2.4661 | |
| 31 | S | A | -1.1794 | |
| 32 | F | A | 0.0000 | |
| 33 | L | A | 0.6023 | |
| 34 | I | A | 0.0000 | |
| 35 | Q | A | 0.4275 | |
| 36 | Y | A | 0.3506 | |
| 37 | Q | A | -0.8662 | |
| 38 | E | A | -1.7964 | |
| 39 | S | A | -1.5593 | |
| 40 | E | A | -2.3967 | |
| 41 | K | A | -1.8731 | |
| 42 | V | A | 0.0650 | |
| 43 | G | A | -0.9430 | |
| 44 | E | A | -1.5910 | |
| 45 | A | A | -0.3324 | |
| 46 | I | A | 0.8579 | |
| 47 | V | A | 1.6872 | |
| 48 | L | A | 1.1896 | |
| 49 | T | A | 0.3764 | |
| 50 | V | A | 0.0000 | |
| 51 | P | A | -1.1504 | |
| 52 | G | A | -1.2553 | |
| 53 | S | A | -0.9867 | |
| 54 | E | A | -1.4492 | |
| 55 | R | A | -1.2707 | |
| 56 | S | A | -0.8160 | |
| 57 | Y | A | -0.8130 | |
| 58 | D | A | -1.7160 | |
| 59 | L | A | 0.0000 | |
| 60 | T | A | -1.3564 | |
| 61 | G | A | -1.4824 | |
| 62 | L | A | 0.0000 | |
| 63 | K | A | -2.9999 | |
| 64 | P | A | -2.5517 | |
| 65 | G | A | -1.8825 | |
| 66 | T | A | -2.3124 | |
| 67 | E | A | -2.0790 | |
| 68 | Y | A | 0.0000 | |
| 69 | T | A | -0.0322 | |
| 70 | V | A | 0.0000 | |
| 71 | S | A | 0.2376 | |
| 72 | I | A | 0.0000 | |
| 73 | Y | A | -0.1713 | |
| 74 | G | A | 0.0000 | |
| 75 | V | A | 0.0000 | |
| 76 | G | A | 0.0000 | |
| 77 | R | A | -2.4258 | |
| 78 | H | A | -1.4026 | |
| 79 | Y | A | 0.1727 | |
| 80 | T | A | -0.2312 | |
| 81 | V | A | 0.1745 | |
| 82 | Y | A | -0.0769 | |
| 83 | D | A | -1.6514 | |
| 84 | S | A | -0.8518 | |
| 85 | N | A | -1.5232 | |
| 86 | P | A | -0.9857 | |
| 87 | L | A | -0.4175 | |
| 88 | S | A | 0.1213 | |
| 89 | A | A | 1.2244 | |
| 90 | I | A | 1.7815 | |
| 91 | F | A | 0.0000 | |
| 92 | T | A | -0.9073 | |
| 93 | T | A | -1.9699 |