| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFSDIVVNGKVVVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTVGHPLFNKLGDTENPTAYVVEGADDRVAFSFDPKQTQLFIVGCEPPTGEHWDVAPPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYRRSGPEGHPLPAAPPPSPLYVKPPPSSPYAVLPSTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLCTPADNVYDPSCFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:07)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9477 | |
| 2 | L | A | 1.9734 | |
| 3 | P | A | 0.6531 | |
| 4 | P | A | 0.3431 | |
| 5 | T | A | 0.1094 | |
| 6 | T | A | 0.1472 | |
| 7 | P | A | 0.1802 | |
| 8 | V | A | 1.2000 | |
| 9 | A | A | 0.0154 | |
| 10 | K | A | -1.1685 | |
| 11 | V | A | -0.4570 | |
| 12 | Q | A | -1.5745 | |
| 13 | S | A | -1.6267 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4264 | |
| 16 | E | A | -2.4460 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4562 | |
| 20 | P | A | 0.1287 | |
| 21 | T | A | 0.1648 | |
| 22 | S | A | -0.0939 | |
| 23 | L | A | 0.1094 | |
| 24 | F | A | -0.0099 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.1365 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.6601 | |
| 31 | R | A | -2.5712 | |
| 32 | L | A | -0.7289 | |
| 33 | L | A | 1.2432 | |
| 34 | T | A | 1.4638 | |
| 35 | V | A | 1.9922 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | 0.1871 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | 0.1319 | |
| 40 | S | A | -0.1274 | |
| 41 | D | A | 0.0533 | |
| 42 | I | A | 1.8847 | |
| 43 | V | A | 2.5941 | |
| 44 | V | A | 1.9263 | |
| 45 | N | A | -0.4090 | |
| 46 | G | A | -0.2391 | |
| 47 | K | A | 0.0273 | |
| 48 | V | A | 2.3673 | |
| 49 | V | A | 2.8235 | |
| 50 | V | A | 1.8731 | |
| 51 | P | A | 0.7316 | |
| 52 | K | A | -0.0881 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1207 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4639 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2586 | |
| 70 | K | A | -1.8046 | |
| 71 | F | A | -0.6638 | |
| 72 | A | A | -0.5905 | |
| 73 | L | A | -0.8687 | |
| 74 | P | A | -1.2551 | |
| 75 | Q | A | -2.4831 | |
| 76 | K | A | -3.1013 | |
| 77 | D | A | -2.9933 | |
| 78 | F | A | -1.6515 | |
| 79 | Y | A | -1.9304 | |
| 80 | D | A | -2.7716 | |
| 81 | P | A | -2.3601 | |
| 82 | E | A | -3.0762 | |
| 83 | K | A | -3.4430 | |
| 84 | E | A | -2.5060 | |
| 85 | R | A | -1.3173 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6330 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9675 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3243 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6803 | |
| 99 | G | A | -0.5407 | |
| 100 | P | A | -0.4281 | |
| 101 | L | A | -0.0050 | |
| 102 | G | A | -0.2198 | |
| 103 | K | A | -0.6140 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.4339 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.1434 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.4115 | |
| 110 | L | A | 0.2942 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.1554 | |
| 113 | K | A | -0.5345 | |
| 114 | L | A | 0.0000 | |
| 115 | G | A | -0.5818 | |
| 116 | D | A | -1.4215 | |
| 117 | T | A | -1.1647 | |
| 118 | E | A | -2.6437 | |
| 119 | N | A | -2.3939 | |
| 120 | P | A | -1.4028 | |
| 121 | T | A | -0.6467 | |
| 122 | A | A | 0.3064 | |
| 123 | Y | A | 1.2540 | |
| 124 | V | A | 1.3318 | |
| 125 | V | A | 2.0205 | |
| 126 | E | A | -0.6107 | |
| 127 | G | A | -1.1853 | |
| 128 | A | A | -1.4559 | |
| 129 | D | A | -2.3956 | |
| 130 | D | A | -1.7001 | |
| 131 | R | A | -1.1583 | |
| 132 | V | A | 0.2300 | |
| 133 | A | A | 0.4428 | |
| 134 | F | A | 0.2793 | |
| 135 | S | A | -0.0710 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.6659 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5580 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2593 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1274 | |
| 157 | D | A | 0.4015 | |
| 158 | V | A | 1.1177 | |
| 159 | A | A | 0.9154 | |
| 160 | P | A | 0.0882 | |
| 161 | P | A | 0.3337 | |
| 162 | C | A | 0.4624 | |
| 163 | P | A | -0.0689 | |
| 164 | G | A | -0.1852 | |
| 165 | L | A | 0.3692 | |
| 166 | P | A | -0.1915 | |
| 167 | P | A | -0.3785 | |
| 168 | G | A | -0.4669 | |
| 169 | A | A | -0.0950 | |
| 170 | C | A | 0.7388 | |
| 171 | P | A | 0.6291 | |
| 172 | P | A | 1.1245 | |
| 173 | I | A | 2.3277 | |
| 174 | Q | A | 1.2154 | |
| 175 | L | A | 1.4991 | |
| 176 | V | A | 0.8457 | |
| 177 | N | A | -0.3215 | |
| 178 | S | A | 0.0218 | |
| 179 | V | A | 0.4280 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3721 | |
| 182 | D | A | 0.0776 | |
| 183 | G | A | -0.1614 | |
| 184 | D | A | -0.5797 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1449 | |
| 190 | F | A | 0.0556 | |
| 191 | G | A | -0.1079 | |
| 192 | N | A | -0.3049 | |
| 193 | M | A | -0.2131 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.5924 | |
| 197 | E | A | -2.9580 | |
| 198 | L | A | -1.2193 | |
| 199 | Q | A | -2.6362 | |
| 200 | Q | A | -3.4370 | |
| 201 | D | A | -3.6401 | |
| 202 | R | A | -3.3793 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.4439 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.4333 | |
| 211 | S | A | -1.8029 | |
| 212 | T | A | -1.5414 | |
| 213 | R | A | -2.3032 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1823 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.2957 | |
| 220 | L | A | 0.4962 | |
| 221 | K | A | -1.3178 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.9646 | |
| 224 | N | A | -1.5752 | |
| 225 | E | A | -1.3172 | |
| 226 | A | A | -0.6827 | |
| 227 | Y | A | -0.4526 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.7060 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | -0.1374 | |
| 234 | F | A | 0.0358 | |
| 235 | G | A | -0.8680 | |
| 236 | R | A | -2.5520 | |
| 237 | R | A | -2.6950 | |
| 238 | E | A | -1.9836 | |
| 239 | Q | A | -0.0552 | |
| 240 | V | A | 1.5384 | |
| 241 | Y | A | 1.2393 | |
| 242 | A | A | 0.1687 | |
| 243 | R | A | -1.3043 | |
| 244 | H | A | -1.1812 | |
| 245 | F | A | -0.2133 | |
| 246 | Y | A | 0.0000 | |
| 247 | R | A | 0.0000 | |
| 248 | R | A | -0.7978 | |
| 249 | S | A | -1.1068 | |
| 250 | G | A | -1.1340 | |
| 251 | P | A | -1.1123 | |
| 252 | E | A | -1.3468 | |
| 253 | G | A | -1.2677 | |
| 254 | H | A | -1.4450 | |
| 255 | P | A | -0.8556 | |
| 256 | L | A | 0.3661 | |
| 257 | P | A | 0.0311 | |
| 258 | A | A | -0.0250 | |
| 259 | A | A | 0.0827 | |
| 260 | P | A | -0.5189 | |
| 261 | P | A | -0.5054 | |
| 262 | P | A | -0.1810 | |
| 263 | S | A | 0.2606 | |
| 264 | P | A | 0.6694 | |
| 265 | L | A | 1.7383 | |
| 266 | Y | A | 1.3290 | |
| 267 | V | A | 1.1361 | |
| 268 | K | A | -0.5363 | |
| 269 | P | A | 0.0585 | |
| 270 | P | A | -0.4601 | |
| 271 | P | A | -0.3184 | |
| 272 | S | A | -0.2803 | |
| 273 | S | A | 0.3154 | |
| 274 | P | A | 1.1578 | |
| 275 | Y | A | 1.8809 | |
| 276 | A | A | 1.1436 | |
| 277 | V | A | 2.7205 | |
| 278 | L | A | 1.9884 | |
| 279 | P | A | 1.0537 | |
| 280 | S | A | 0.0000 | |
| 281 | T | A | -0.2730 | |
| 282 | D | A | -0.9140 | |
| 283 | Y | A | 0.8317 | |
| 284 | F | A | 0.7101 | |
| 285 | G | A | 0.1406 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.8539 | |
| 291 | L | A | 1.6613 | |
| 292 | V | A | 0.6678 | |
| 293 | S | A | -0.1599 | |
| 294 | S | A | -0.9963 | |
| 295 | D | A | -1.8710 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | -1.0220 | |
| 298 | L | A | -1.1449 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6677 | |
| 301 | R | A | -1.9054 | |
| 302 | P | A | -0.9763 | |
| 303 | F | A | -0.1884 | |
| 304 | W | A | -0.5218 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0816 | |
| 307 | R | A | -2.9253 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.6542 | |
| 310 | G | A | -1.4176 | |
| 311 | N | A | -1.4038 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.9459 | |
| 319 | N | A | -0.8956 | |
| 320 | E | A | -1.0573 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3395 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.1482 | |
| 333 | N | A | 0.3939 | |
| 334 | F | A | 1.4057 | |
| 335 | T | A | 0.7044 | |
| 336 | I | A | 0.3534 | |
| 337 | S | A | -1.0058 | |
| 338 | Q | A | -1.7487 | |
| 339 | Q | A | -1.2940 | |
| 340 | L | A | 0.6685 | |
| 341 | C | A | 0.5263 | |
| 342 | T | A | 0.0964 | |
| 343 | P | A | -0.0912 | |
| 344 | A | A | -0.6275 | |
| 345 | D | A | -1.6523 | |
| 346 | N | A | -1.0377 | |
| 347 | V | A | 0.9836 | |
| 348 | Y | A | 1.2095 | |
| 349 | D | A | 0.1037 | |
| 350 | P | A | -0.3912 | |
| 351 | S | A | -0.3092 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -0.7678 | |
| 354 | K | A | -1.7898 | |
| 355 | N | A | -1.7747 | |
| 356 | Y | A | -0.1325 | |
| 357 | L | A | 0.5415 | |
| 358 | R | A | 0.8702 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.4544 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0066 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -1.9073 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6601 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.2797 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3208 | |
| 376 | L | A | -1.7478 | |
| 377 | D | A | -2.0194 | |
| 378 | P | A | -1.0549 | |
| 379 | G | A | -1.0183 | |
| 380 | V | A | -0.9289 | |
| 381 | L | A | -0.5363 | |
| 382 | A | A | -0.6599 | |
| 383 | H | A | -0.8553 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4072 | |
| 386 | T | A | -0.5839 | |
| 387 | M | A | -0.3375 | |
| 388 | N | A | -0.8719 | |
| 389 | P | A | -1.2820 | |
| 390 | T | A | -1.6069 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.5873 | |
| 393 | E | A | -3.0217 | |
| 394 | N | A | -2.8006 | |
| 395 | W | A | -1.6176 | |
| 396 | N | A | -1.5040 | |
| 397 | L | A | -0.2871 | |
| 398 | G | A | 0.4870 | |
| 399 | F | A | 2.3967 | |
| 400 | V | A | 1.8112 | |
| 401 | P | A | 0.0402 | |
| 402 | P | A | -1.9911 | |
| 403 | K | A | -3.6420 | |
| 404 | E | A | -4.0529 | |
| 405 | R | A | -4.5368 | |
| 406 | E | A | -4.0555 | |
| 407 | D | A | -2.9932 | |
| 408 | P | A | -1.8334 | |
| 409 | Y | A | -0.9835 | |
| 410 | K | A | -2.0999 | |
| 411 | G | A | -0.6366 | |
| 412 | L | A | 0.6671 | |
| 413 | I | A | 1.5886 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3710 | |
| 416 | E | A | -1.6254 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.8382 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.8931 | |
| 421 | E | A | -2.5113 | |
| 422 | R | A | -2.0773 | |
| 423 | F | A | -1.0243 | |
| 424 | S | A | -1.3061 | |
| 425 | Q | A | -1.7795 | |
| 426 | D | A | -2.8676 | |
| 427 | L | A | -1.9824 | |
| 428 | D | A | -2.7679 | |
| 429 | Q | A | -2.5994 | |
| 430 | F | A | -1.4499 | |
| 431 | A | A | -0.9199 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.6315 | |
| 435 | K | A | -0.7729 | |
| 436 | F | A | 0.1253 | |
| 437 | L | A | 1.0138 | |
| 438 | Y | A | 0.8070 | |
| 439 | Q | A | -0.2826 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine