Project name: query_structure

Status: done

Started: 2026-03-17 01:12:42
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Chain sequence(s) A: VSDVPRDLEVVAATPTSLLISWDAPAVTVRYYRITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYAVTGRVLMTLLSKPISINYRT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:33)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:34)
Show buried residues

Minimal score value
-3.4232
Maximal score value
2.3021
Average score
-0.5537
Total score value
-52.052

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 V A 1.6422
2 S A 0.1015
3 D A -0.1972
4 V A -0.7167
5 P A 0.0000
6 R A -3.1706
7 D A -3.4232
8 L A 0.0000
9 E A -2.1212
10 V A 0.1066
11 V A 1.5459
12 A A 0.9033
13 A A 0.3012
14 T A -0.5324
15 P A -1.1062
16 T A -0.9837
17 S A -0.5296
18 L A 0.0000
19 L A 0.7644
20 I A 0.0000
21 S A -1.1403
22 W A 0.0000
23 D A -3.2347
24 A A -1.6771
25 P A 0.0000
26 A A 0.1731
27 V A 0.3935
28 T A -0.5028
29 V A -0.7425
30 R A -1.9098
31 Y A -0.9258
32 Y A 0.0000
33 R A -0.7650
34 I A 0.0000
35 T A -0.5581
36 Y A -0.2788
37 G A 0.0000
38 E A -1.7191
39 T A -1.4300
40 G A -1.3254
41 G A -1.4926
42 N A -1.5600
43 S A -0.8820
44 P A -0.3202
45 V A 0.4519
46 Q A -0.8220
47 E A -1.6766
48 F A -0.7350
49 T A -0.3535
50 V A 0.0000
51 P A -1.1152
52 G A -1.3167
53 S A -1.3045
54 K A -1.9059
55 S A -1.3470
56 T A -0.7417
57 A A 0.0000
58 T A 0.2429
59 I A 0.0000
60 S A -0.6546
61 G A -1.0273
62 L A 0.0000
63 K A -2.4126
64 P A -1.6835
65 G A -1.4475
66 V A -1.5988
67 D A -2.5994
68 Y A 0.0000
69 T A -0.8982
70 I A 0.0000
71 T A -0.3719
72 V A 0.0000
73 Y A -0.0755
74 A A 0.0000
75 V A 0.0000
76 T A 0.0966
77 G A 0.4444
78 R A -0.1686
79 V A 1.8783
80 L A 2.3021
81 M A 1.8813
82 T A 1.2262
83 L A 1.6693
84 L A 1.4460
85 S A 0.0000
86 K A -1.3138
87 P A -0.8207
88 I A -0.6251
89 S A -0.7218
90 I A -0.7518
91 N A -1.8476
92 Y A -1.6056
93 R A -2.7215
94 T A -1.7138
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Laboratory of Theory of Biopolymers 2018