Project name: 15.P2E8.pdb

Status: done

Started: 2026-03-19 12:35:06
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Chain sequence(s) H: QVQLVESGGGLAQAGGSLRLSCAASGRAFLTYAMGWFRQAPGKEREFVAGIRWSGSTTYYADSAKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAGKIGLQIGTRGDEYDYWGQGTQVTVSS
input PDB
Selected Chain(s) H
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with H chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:11)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:11)
Show buried residues

Minimal score value
-3.1958
Maximal score value
1.2323
Average score
-0.6569
Total score value
-81.4563

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q H -1.9222
2 V H 0.0000
3 Q H -1.3647
4 L H 0.0000
5 V H 1.1207
6 E H 0.1825
7 S H -0.4597
8 G H -0.8028
9 G H -0.6384
11 G H 0.1361
12 L H 0.9413
13 A H -0.2349
14 Q H -1.4232
15 A H -1.6473
16 G H -1.4586
17 G H -1.0421
18 S H -0.9784
19 L H -0.5237
20 R H -1.2329
21 L H 0.0000
22 S H -0.1476
23 C H 0.0000
24 A H -0.1054
25 A H 0.0000
26 S H -1.4659
27 G H -2.1462
28 R H -2.3370
29 A H -0.5602
30 F H 0.0000
35 L H 1.0403
36 T H 0.9656
37 Y H 0.0000
38 A H 0.0000
39 M H 0.0000
40 G H 0.0000
41 W H 0.0000
42 F H 0.0000
43 R H 0.0000
44 Q H -1.7710
45 A H -1.6955
46 P H -1.2855
47 G H -1.7987
48 K H -2.9555
49 E H -3.1958
50 R H -2.2889
51 E H -1.7400
52 F H -0.9321
53 V H 0.0000
54 A H 0.0000
55 G H 0.0000
56 I H 0.0000
57 R H -0.0193
58 W H 0.7025
59 S H -0.0478
62 G H -0.5570
63 S H -0.5460
64 T H -0.1747
65 T H -0.0437
66 Y H 0.0752
67 Y H -0.6502
68 A H -1.1794
69 D H -2.4287
70 S H -1.7535
71 A H 0.0000
72 K H -2.5784
74 G H -1.8114
75 R H -1.6064
76 F H 0.0000
77 T H -0.7022
78 I H 0.0000
79 S H -0.3842
80 R H -0.7184
81 D H -1.1929
82 N H -0.8784
83 A H -1.0014
84 K H -2.1192
85 N H -1.4508
86 T H 0.0000
87 V H 0.0000
88 Y H -0.2518
89 L H 0.0000
90 Q H -0.7964
91 M H 0.0000
92 N H -1.3164
93 S H -1.3143
94 L H 0.0000
95 K H -2.6493
96 P H -1.9967
97 E H -2.3701
98 D H 0.0000
99 T H -0.9532
100 A H 0.0000
101 V H -0.5206
102 Y H 0.0000
103 Y H -0.1713
104 C H 0.0000
105 A H 0.0000
106 G H 0.0000
107 K H 0.1370
108 I H 1.2257
109 G H 0.8148
110 L H 1.2323
111 Q H 0.0027
111A I H 0.1272
111B G H 0.0000
112B T H -1.0512
112A R H -2.5807
112 G H -2.3101
113 D H -2.8985
114 E H -2.0766
115 Y H 0.0000
116 D H -1.3611
117 Y H -0.4248
118 W H -0.0957
119 G H 0.0000
120 Q H -0.7585
121 G H -0.5439
122 T H -0.6644
123 Q H -0.8504
124 V H 0.0000
125 T H -0.3539
126 V H 0.0000
127 S H -0.9287
128 S H -0.9234
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Laboratory of Theory of Biopolymers 2018