| Chain sequence(s) |
H: QVQLVESGGGLAQAGGSLRLSCAASGRAFLTYAMGWFRQAPGKEREFVAGIRWSGSTTYYADSAKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAGKIGLQIGTRGDEYDYWGQGTQVTVSS
input PDB |
| Selected Chain(s) | H |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with H chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:11)
[INFO] Main: Simulation completed successfully. (00:01:11)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -1.9222 | |
| 2 | V | H | 0.0000 | |
| 3 | Q | H | -1.3647 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 1.1207 | |
| 6 | E | H | 0.1825 | |
| 7 | S | H | -0.4597 | |
| 8 | G | H | -0.8028 | |
| 9 | G | H | -0.6384 | |
| 11 | G | H | 0.1361 | |
| 12 | L | H | 0.9413 | |
| 13 | A | H | -0.2349 | |
| 14 | Q | H | -1.4232 | |
| 15 | A | H | -1.6473 | |
| 16 | G | H | -1.4586 | |
| 17 | G | H | -1.0421 | |
| 18 | S | H | -0.9784 | |
| 19 | L | H | -0.5237 | |
| 20 | R | H | -1.2329 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.1476 | |
| 23 | C | H | 0.0000 | |
| 24 | A | H | -0.1054 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -1.4659 | |
| 27 | G | H | -2.1462 | |
| 28 | R | H | -2.3370 | |
| 29 | A | H | -0.5602 | |
| 30 | F | H | 0.0000 | |
| 35 | L | H | 1.0403 | |
| 36 | T | H | 0.9656 | |
| 37 | Y | H | 0.0000 | |
| 38 | A | H | 0.0000 | |
| 39 | M | H | 0.0000 | |
| 40 | G | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | F | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -1.7710 | |
| 45 | A | H | -1.6955 | |
| 46 | P | H | -1.2855 | |
| 47 | G | H | -1.7987 | |
| 48 | K | H | -2.9555 | |
| 49 | E | H | -3.1958 | |
| 50 | R | H | -2.2889 | |
| 51 | E | H | -1.7400 | |
| 52 | F | H | -0.9321 | |
| 53 | V | H | 0.0000 | |
| 54 | A | H | 0.0000 | |
| 55 | G | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | R | H | -0.0193 | |
| 58 | W | H | 0.7025 | |
| 59 | S | H | -0.0478 | |
| 62 | G | H | -0.5570 | |
| 63 | S | H | -0.5460 | |
| 64 | T | H | -0.1747 | |
| 65 | T | H | -0.0437 | |
| 66 | Y | H | 0.0752 | |
| 67 | Y | H | -0.6502 | |
| 68 | A | H | -1.1794 | |
| 69 | D | H | -2.4287 | |
| 70 | S | H | -1.7535 | |
| 71 | A | H | 0.0000 | |
| 72 | K | H | -2.5784 | |
| 74 | G | H | -1.8114 | |
| 75 | R | H | -1.6064 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -0.7022 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.3842 | |
| 80 | R | H | -0.7184 | |
| 81 | D | H | -1.1929 | |
| 82 | N | H | -0.8784 | |
| 83 | A | H | -1.0014 | |
| 84 | K | H | -2.1192 | |
| 85 | N | H | -1.4508 | |
| 86 | T | H | 0.0000 | |
| 87 | V | H | 0.0000 | |
| 88 | Y | H | -0.2518 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -0.7964 | |
| 91 | M | H | 0.0000 | |
| 92 | N | H | -1.3164 | |
| 93 | S | H | -1.3143 | |
| 94 | L | H | 0.0000 | |
| 95 | K | H | -2.6493 | |
| 96 | P | H | -1.9967 | |
| 97 | E | H | -2.3701 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.9532 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | -0.5206 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | -0.1713 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | G | H | 0.0000 | |
| 107 | K | H | 0.1370 | |
| 108 | I | H | 1.2257 | |
| 109 | G | H | 0.8148 | |
| 110 | L | H | 1.2323 | |
| 111 | Q | H | 0.0027 | |
| 111A | I | H | 0.1272 | |
| 111B | G | H | 0.0000 | |
| 112B | T | H | -1.0512 | |
| 112A | R | H | -2.5807 | |
| 112 | G | H | -2.3101 | |
| 113 | D | H | -2.8985 | |
| 114 | E | H | -2.0766 | |
| 115 | Y | H | 0.0000 | |
| 116 | D | H | -1.3611 | |
| 117 | Y | H | -0.4248 | |
| 118 | W | H | -0.0957 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -0.7585 | |
| 121 | G | H | -0.5439 | |
| 122 | T | H | -0.6644 | |
| 123 | Q | H | -0.8504 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | -0.3539 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.9287 | |
| 128 | S | H | -0.9234 |