Project name: 6cb998ef2a487f0

Status: done

Started: 2025-06-03 05:27:06
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Chain sequence(s) H: EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSGISGSGGFTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKPPRGYNYGPFDYWGQGTLVTVSS
L: SYVLTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSSSDHVVFGGGTKLTVL
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:28)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:30)
Show buried residues

Minimal score value
-3.0156
Maximal score value
1.7077
Average score
-0.5281
Total score value
-120.9358

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E H -2.0378
2 V H -1.0461
3 Q H -1.1365
4 L H 0.0000
5 L H 0.4011
6 E H 0.0000
7 S H -0.0996
8 G H -0.5193
9 G H 0.2711
11 G H 0.8295
12 L H 1.4137
13 V H -0.0205
14 Q H -1.3328
15 P H -1.6281
16 G H -1.4239
17 G H -0.9915
18 S H -1.0101
19 L H -0.5046
20 R H -1.1083
21 L H 0.0000
22 S H -0.2339
23 C H 0.0000
24 A H -0.2945
25 A H 0.0000
26 S H -1.0188
27 G H -1.1924
28 F H -0.4807
29 T H -0.2530
30 F H 0.0000
35 S H -0.8097
36 S H -0.3712
37 Y H -0.0967
38 A H 0.1570
39 M H 0.0000
40 S H 0.0000
41 W H 0.0000
42 V H 0.0000
43 R H 0.0000
44 Q H -0.6067
45 A H -1.0092
46 P H -0.7984
47 G H -1.4845
48 K H -2.2639
49 G H -1.4918
50 L H 0.0000
51 E H -0.8493
52 W H 0.0000
53 V H 0.0000
54 S H 0.0000
55 G H 0.0000
56 I H 0.0000
57 S H 0.4555
58 G H -0.1369
59 S H -0.3163
62 G H -0.1018
63 G H 0.2963
64 F H 1.6368
65 T H 0.8677
66 Y H 0.0747
67 Y H -0.9803
68 A H 0.0000
69 D H -2.5016
70 S H -1.7521
71 V H 0.0000
72 K H -2.5995
74 G H -1.7236
75 R H -1.4136
76 F H 0.0000
77 T H -0.6586
78 I H 0.0000
79 S H -0.1695
80 R H -0.9416
81 D H -1.4942
82 N H -1.7306
83 S H -1.5716
84 K H -2.3480
85 N H -1.6989
86 T H -0.9967
87 L H 0.0000
88 Y H -0.2725
89 L H 0.0000
90 Q H -0.7066
91 M H 0.0000
92 N H -1.1733
93 S H -1.2450
94 L H 0.0000
95 R H -2.2829
96 A H -1.6984
97 E H -2.2327
98 D H 0.0000
99 T H -0.3455
100 A H 0.0000
101 V H 0.8171
102 Y H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 A H 0.0000
106 K H 0.0000
107 P H 0.0000
108 P H -0.2416
109 R H -0.6081
110 G H -0.1128
111 Y H 1.1036
112A N H 0.5994
112 Y H 1.1753
113 G H 0.3458
114 P H 0.0000
115 F H 0.0000
116 D H 0.3085
117 Y H 0.8343
118 W H 0.5070
119 G H 0.0000
120 Q H -1.2773
121 G H -0.2445
122 T H 0.5304
123 L H 1.7077
124 V H 0.0000
125 T H 0.3637
126 V H 0.0000
127 S H -0.6754
128 S H -0.5558
1 S L 0.1525
2 Y L 0.6948
3 V L 1.5582
4 L L 0.0000
5 T L -0.0205
6 Q L -0.3384
7 P L -0.5203
8 P L -0.7868
9 S L -0.7170
11 V L -0.5571
12 S L -0.0369
13 V L 0.0703
14 A L -0.1789
15 P L -1.1801
16 G L -2.2356
17 Q L -2.3539
18 T L -1.8736
19 A L 0.0000
20 R L -1.9564
21 I L 0.0000
22 T L -0.6274
23 C L 0.0000
24 G L -0.8702
25 G L -1.1955
26 N L -2.2135
27 N L -2.8267
28 I L 0.0000
29 G L -1.9671
36 S L -1.3632
37 K L -0.9300
38 S L -0.5188
39 V L 0.0000
40 H L 0.0000
41 W L 0.0000
42 Y L 0.0000
43 Q L -0.1711
44 Q L 0.0000
45 K L -1.3294
46 P L -1.2935
47 G L -1.4304
48 Q L -1.7125
49 A L -0.6743
50 P L 0.0000
51 V L 1.5018
52 L L 0.0000
53 V L 0.0000
54 V L 0.0000
55 Y L -0.8923
56 D L -1.1066
57 D L -1.3234
65 S L -1.4230
66 D L -1.9736
67 R L -1.6657
68 P L -0.6002
69 S L -0.6676
70 G L -0.7432
71 I L -0.5906
72 P L -1.1901
74 E L -2.2562
75 R L -1.7255
76 F L 0.0000
77 S L -1.2260
78 G L 0.0000
79 S L -0.8804
80 N L -1.3135
83 S L -1.4410
84 G L -2.0453
85 N L -2.6589
86 T L -1.5062
87 A L 0.0000
88 T L -0.7719
89 L L 0.0000
90 T L -1.1013
91 I L 0.0000
92 S L -2.1507
93 R L -3.0156
94 V L 0.0000
95 E L -2.4319
96 A L -0.9290
97 G L -1.2074
98 D L 0.0000
99 E L -1.4072
100 A L 0.0000
101 D L -1.4170
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 Q L 0.0000
106 V L 0.0000
107 W L 0.1805
108 D L 0.0000
109 S L -0.4241
110 S L -0.5047
113 S L -0.5345
114 D L -0.6333
115 H L -0.5277
116 V L 0.0000
117 V L 0.5069
118 F L 0.3337
119 G L 0.0000
120 G L -0.7645
121 G L -1.0583
122 T L 0.0000
123 K L -1.4010
124 L L 0.0000
125 T L -0.0078
126 V L 0.2111
127 L L 1.4761
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Laboratory of Theory of Biopolymers 2018