Chain sequence(s) |
H: EVHLQQSGPVLVKPGPSVKISCKASGFTFTDSYMHWVKQSHGKSLEWIGLVYPYNGGTTYNQKFKGKATLTVDTSSSTAYMELYSLTSEDSAVYYCARWGHYYDGVFWGQGTLVTVSS
L: DVVLTQTPLSLPVNIGDQASISCKSIKSLLNSDGFTYLDWYLQKPGQSPQLLIYLVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQNNYLPYTFGGGTKLEIK input PDB |
Selected Chain(s) | H,L |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:01) [INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01) [INFO] runJob: Creating pdb object from: input.pdb (00:00:01) [INFO] FoldX: Starting FoldX energy minimalization (00:00:01) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:26) [INFO] Main: Simulation completed successfully. (00:02:28) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | E | H | -1.9837 | |
2 | V | H | -1.0814 | |
3 | H | H | -1.4644 | |
4 | L | H | 0.0000 | |
5 | Q | H | -1.7732 | |
6 | Q | H | 0.0000 | |
7 | S | H | -0.8556 | |
8 | G | H | -0.6319 | |
9 | P | H | 0.3226 | |
11 | V | H | 1.0010 | |
12 | L | H | 1.4796 | |
13 | V | H | -0.0332 | |
14 | K | H | -1.7258 | |
15 | P | H | -1.5952 | |
16 | G | H | -1.1370 | |
17 | P | H | -0.8423 | |
18 | S | H | -0.7690 | |
19 | V | H | 0.0000 | |
20 | K | H | -1.2572 | |
21 | I | H | 0.0000 | |
22 | S | H | -0.7208 | |
23 | C | H | 0.0000 | |
24 | K | H | -1.7068 | |
25 | A | H | 0.0000 | |
26 | S | H | -1.1293 | |
27 | G | H | -1.0635 | |
28 | F | H | -0.5994 | |
29 | T | H | -0.5733 | |
30 | F | H | 0.0000 | |
35 | T | H | -0.4758 | |
36 | D | H | -1.5318 | |
37 | S | H | 0.0000 | |
38 | Y | H | -0.0315 | |
39 | M | H | 0.0000 | |
40 | H | H | 0.0000 | |
41 | W | H | 0.0000 | |
42 | V | H | 0.0000 | |
43 | K | H | 0.0000 | |
44 | Q | H | 0.0000 | |
45 | S | H | -1.5138 | |
46 | H | H | -1.6637 | |
47 | G | H | -1.7595 | |
48 | K | H | -2.4325 | |
49 | S | H | -1.4493 | |
50 | L | H | 0.0000 | |
51 | E | H | -1.1493 | |
52 | W | H | 0.0000 | |
53 | I | H | 0.0000 | |
54 | G | H | 0.0000 | |
55 | L | H | 0.0000 | |
56 | V | H | 0.0000 | |
57 | Y | H | 0.1231 | |
58 | P | H | 0.0000 | |
59 | Y | H | 0.3198 | |
62 | N | H | -0.7257 | |
63 | G | H | -0.5216 | |
64 | G | H | -0.3711 | |
65 | T | H | -0.1636 | |
66 | T | H | -0.0654 | |
67 | Y | H | -0.5880 | |
68 | N | H | 0.0000 | |
69 | Q | H | -2.5311 | |
70 | K | H | -2.8811 | |
71 | F | H | 0.0000 | |
72 | K | H | -2.7920 | |
74 | G | H | -1.7507 | |
75 | K | H | -1.4375 | |
76 | A | H | 0.0000 | |
77 | T | H | -0.5957 | |
78 | L | H | 0.0000 | |
79 | T | H | -0.1079 | |
80 | V | H | -0.1162 | |
81 | D | H | -0.5800 | |
82 | T | H | -0.3700 | |
83 | S | H | -0.4530 | |
84 | S | H | -0.6076 | |
85 | S | H | -0.6821 | |
86 | T | H | 0.0000 | |
87 | A | H | 0.0000 | |
88 | Y | H | -0.2155 | |
89 | M | H | 0.0000 | |
90 | E | H | -0.7943 | |
91 | L | H | 0.0000 | |
92 | Y | H | -0.2995 | |
93 | S | H | -0.6347 | |
94 | L | H | 0.0000 | |
95 | T | H | -1.2519 | |
96 | S | H | -1.4617 | |
97 | E | H | -1.9893 | |
98 | D | H | 0.0000 | |
99 | S | H | -0.4893 | |
100 | A | H | 0.0000 | |
101 | V | H | 0.1039 | |
102 | Y | H | 0.0000 | |
103 | Y | H | 0.0000 | |
104 | C | H | 0.0000 | |
105 | A | H | 0.0000 | |
106 | R | H | 0.0000 | |
107 | W | H | 0.0000 | |
108 | G | H | 0.0000 | |
109 | H | H | -0.3102 | |
110 | Y | H | 1.4010 | |
113 | Y | H | 1.5883 | |
114 | D | H | 0.7064 | |
115 | G | H | 0.0000 | |
116 | V | H | 0.0000 | |
117 | F | H | 0.2766 | |
118 | W | H | -0.2751 | |
119 | G | H | 0.0000 | |
120 | Q | H | -1.4859 | |
121 | G | H | -0.7085 | |
122 | T | H | 0.0000 | |
123 | L | H | 0.5578 | |
124 | V | H | 0.0000 | |
125 | T | H | 0.2526 | |
126 | V | H | 0.0000 | |
127 | S | H | -0.5540 | |
128 | S | H | -0.7505 | |
1 | D | L | -0.9629 | |
2 | V | L | 0.0000 | |
3 | V | L | 1.4508 | |
4 | L | L | 0.0000 | |
5 | T | L | 0.0647 | |
6 | Q | L | 0.0000 | |
7 | T | L | 0.0176 | |
8 | P | L | 0.3772 | |
9 | L | L | 1.1428 | |
10 | S | L | 0.0756 | |
11 | L | L | -0.2560 | |
12 | P | L | -1.0171 | |
13 | V | L | 0.0000 | |
14 | N | L | -0.9312 | |
15 | I | L | 0.5529 | |
16 | G | L | -0.6865 | |
17 | D | L | -1.3571 | |
18 | Q | L | -1.9567 | |
19 | A | L | 0.0000 | |
20 | S | L | -0.7746 | |
21 | I | L | 0.0000 | |
22 | S | L | -0.7105 | |
23 | C | L | 0.0000 | |
24 | K | L | -1.5293 | |
25 | S | L | 0.0000 | |
26 | I | L | 1.2411 | |
27 | K | L | -0.2985 | |
28 | S | L | -0.3641 | |
29 | L | L | 0.0000 | |
30 | L | L | 0.8835 | |
31 | N | L | -0.0753 | |
32 | S | L | -0.6616 | |
34 | D | L | -1.1328 | |
35 | G | L | -0.1805 | |
36 | F | L | 1.3686 | |
37 | T | L | 0.9717 | |
38 | Y | L | 0.9123 | |
39 | L | L | 0.0000 | |
40 | D | L | 0.0000 | |
41 | W | L | 0.0000 | |
42 | Y | L | 0.0000 | |
43 | L | L | 0.0000 | |
44 | Q | L | -0.9390 | |
45 | K | L | -1.5132 | |
46 | P | L | -1.0151 | |
47 | G | L | -1.4369 | |
48 | Q | L | -1.9764 | |
49 | S | L | -1.1706 | |
50 | P | L | 0.0000 | |
51 | Q | L | -0.5373 | |
52 | L | L | 0.0000 | |
53 | L | L | 0.0000 | |
54 | I | L | 0.0000 | |
55 | Y | L | -0.0944 | |
56 | L | L | 0.6177 | |
57 | V | L | 0.0000 | |
65 | S | L | -0.7390 | |
66 | N | L | -1.2233 | |
67 | R | L | -1.6856 | |
68 | F | L | -0.5287 | |
69 | S | L | -0.5319 | |
70 | G | L | -0.9051 | |
71 | V | L | 0.0000 | |
72 | P | L | -1.2406 | |
74 | D | L | -2.1840 | |
75 | R | L | 0.0000 | |
76 | F | L | 0.0000 | |
77 | S | L | -1.1427 | |
78 | G | L | 0.0000 | |
79 | S | L | -0.6822 | |
80 | G | L | -1.0678 | |
83 | S | L | -0.7476 | |
84 | G | L | -0.5564 | |
85 | T | L | -0.9421 | |
86 | D | L | -1.8795 | |
87 | F | L | 0.0000 | |
88 | T | L | -0.8775 | |
89 | L | L | 0.0000 | |
90 | K | L | -1.1903 | |
91 | I | L | 0.0000 | |
92 | S | L | -1.8624 | |
93 | R | L | -1.8365 | |
94 | V | L | 0.0000 | |
95 | E | L | -0.8974 | |
96 | A | L | -0.6418 | |
97 | E | L | -1.9290 | |
98 | D | L | 0.0000 | |
99 | L | L | -0.6350 | |
100 | G | L | 0.0000 | |
101 | V | L | -0.4677 | |
102 | Y | L | 0.0000 | |
103 | Y | L | 0.0000 | |
104 | C | L | 0.0000 | |
105 | F | L | 0.0000 | |
106 | Q | L | 0.0000 | |
107 | N | L | 0.2975 | |
108 | N | L | 0.5950 | |
109 | Y | L | 0.4097 | |
114 | L | L | 1.1513 | |
115 | P | L | 0.0000 | |
116 | Y | L | 0.4436 | |
117 | T | L | 0.0903 | |
118 | F | L | 0.0000 | |
119 | G | L | 0.0000 | |
120 | G | L | -0.5130 | |
121 | G | L | 0.0000 | |
122 | T | L | 0.0000 | |
123 | K | L | -0.8301 | |
124 | L | L | 0.0000 | |
125 | E | L | -0.9986 | |
126 | I | L | -0.2675 | |
127 | K | L | -1.4695 |