| Chain sequence(s) |
A: GSSVSSVPTKLEVVAATPTSLLISWDASSSSVSHYAITYGETGGNSPVQEFTVPGSSSTATISGLSPGVDYTITVYAYHSYDDIFLADSPSSINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:22)
[INFO] Main: Simulation completed successfully. (00:00:22)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.4242 | |
| 2 | S | A | -0.0969 | |
| 3 | S | A | 0.3711 | |
| 4 | V | A | 1.2526 | |
| 5 | S | A | 0.3419 | |
| 6 | S | A | -0.1389 | |
| 7 | V | A | -0.4460 | |
| 8 | P | A | 0.0000 | |
| 9 | T | A | -1.5634 | |
| 10 | K | A | -2.4950 | |
| 11 | L | A | 0.0000 | |
| 12 | E | A | -1.6832 | |
| 13 | V | A | 0.2289 | |
| 14 | V | A | 1.6043 | |
| 15 | A | A | 0.9257 | |
| 16 | A | A | 0.3050 | |
| 17 | T | A | -0.3840 | |
| 18 | P | A | -0.8088 | |
| 19 | T | A | -0.5242 | |
| 20 | S | A | -0.3171 | |
| 21 | L | A | 0.0000 | |
| 22 | L | A | 0.7717 | |
| 23 | I | A | 0.0000 | |
| 24 | S | A | -0.7013 | |
| 25 | W | A | 0.0000 | |
| 26 | D | A | -2.5581 | |
| 27 | A | A | -1.2538 | |
| 28 | S | A | -0.9598 | |
| 29 | S | A | -0.5663 | |
| 30 | S | A | -0.3880 | |
| 31 | S | A | -0.1879 | |
| 32 | V | A | 0.1380 | |
| 33 | S | A | 0.2003 | |
| 34 | H | A | -0.2694 | |
| 35 | Y | A | 0.0000 | |
| 36 | A | A | 0.0000 | |
| 37 | I | A | 0.0000 | |
| 38 | T | A | -0.5199 | |
| 39 | Y | A | -0.3974 | |
| 40 | G | A | 0.0000 | |
| 41 | E | A | -1.2900 | |
| 42 | T | A | -1.1671 | |
| 43 | G | A | -1.2079 | |
| 44 | G | A | -1.3189 | |
| 45 | N | A | -1.5319 | |
| 46 | S | A | -0.9021 | |
| 47 | P | A | -0.4180 | |
| 48 | V | A | 0.2631 | |
| 49 | Q | A | -1.1936 | |
| 50 | E | A | -1.7287 | |
| 51 | F | A | -0.6247 | |
| 52 | T | A | -0.1657 | |
| 53 | V | A | -0.0390 | |
| 54 | P | A | -0.3770 | |
| 55 | G | A | -0.3970 | |
| 56 | S | A | -0.4145 | |
| 57 | S | A | -0.4773 | |
| 58 | S | A | -0.6958 | |
| 59 | T | A | -0.2369 | |
| 60 | A | A | 0.0000 | |
| 61 | T | A | 0.2518 | |
| 62 | I | A | 0.0000 | |
| 63 | S | A | -0.4733 | |
| 64 | G | A | -0.6847 | |
| 65 | L | A | 0.0000 | |
| 66 | S | A | -0.8177 | |
| 67 | P | A | -0.9779 | |
| 68 | G | A | -1.0529 | |
| 69 | V | A | -0.8652 | |
| 70 | D | A | -1.7299 | |
| 71 | Y | A | 0.0000 | |
| 72 | T | A | -0.6948 | |
| 73 | I | A | 0.0000 | |
| 74 | T | A | -0.1368 | |
| 75 | V | A | 0.0000 | |
| 76 | Y | A | 0.1184 | |
| 77 | A | A | 0.0000 | |
| 78 | Y | A | 1.1695 | |
| 79 | H | A | 0.0000 | |
| 80 | S | A | 0.8634 | |
| 81 | Y | A | 0.5774 | |
| 82 | D | A | -1.4464 | |
| 83 | D | A | -0.9323 | |
| 84 | I | A | 1.9926 | |
| 85 | F | A | 2.8267 | |
| 86 | L | A | 2.2858 | |
| 87 | A | A | 0.9671 | |
| 88 | D | A | -0.2419 | |
| 89 | S | A | -0.3904 | |
| 90 | P | A | -0.2568 | |
| 91 | S | A | 0.0000 | |
| 92 | S | A | -0.6464 | |
| 93 | I | A | -0.7714 | |
| 94 | N | A | -1.6549 | |
| 95 | Y | A | -1.3652 | |
| 96 | R | A | -2.2853 | |
| 97 | T | A | -1.1625 |